CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033369.1-P	Field mustard	cytosol	99.79	99.79
CDY18145	Canola	cytosol	97.44	98.07
CDY37444	Canola	nucleus	48.83	81.49
AT1G03050.1	Thale cress	cytosol, mitochondrion	87.85	68.78
CDY32494	Canola	mitochondrion	83.16	68.18
CDY15448	Canola	mitochondrion	82.73	67.83
CDY21904	Canola	mitochondrion	69.3	54.26
CDY22070	Canola	mitochondrion	69.51	54.15
Solyc11g044860.1.1	Tomato	cytosol	52.45	49.2
VIT_12s0055g00790.t01	Wine grape	cytosol, mitochondrion	58.21	46.91
KRH43936	Soybean	cytosol, mitochondrion	57.36	45.36
KRH10492	Soybean	cytosol, mitochondrion	56.5	44.46
KRH58332	Soybean	mitochondrion	54.58	43.76
Solyc01g104870.2.1	Tomato	cytosol, mitochondrion	53.09	42.86
PGSC0003DMT400076552	Potato	cytosol, mitochondrion	52.67	42.44
GSMUA_Achr6P18600_001	Banana	cytosol, mitochondrion	47.55	42.0
PGSC0003DMT400059062	Potato	cytosol	51.81	40.77
CDX86691	Canola	cytosol, mitochondrion	85.07	39.47
GSMUA_Achr10P...	Banana	mitochondrion	40.72	37.82
CDX76760	Canola	cytosol	37.31	37.47
GSMUA_Achr11P...	Banana	cytosol	41.36	37.31
CDX76977	Canola	cytosol	41.36	37.16
CDY11530	Canola	cytosol	41.36	33.45
CDY35361	Canola	cytosol	41.79	33.16
CDX76976	Canola	cytosol	41.79	33.05
CDX68831	Canola	cytosol	41.15	32.66
HORVU1Hr1G065590.1	Barley	cytosol	42.0	32.51
TraesCS1A01G266200.1	Wheat	cytosol	41.79	32.4
CDX75232	Canola	cytosol	40.94	32.38
HORVU0Hr1G000720.3	Barley	cytosol	41.79	32.34
EES18258	Sorghum	cytosol	42.86	32.26
TraesCS1B01G277200.1	Wheat	cytosol	41.58	32.23
Zm00001d010228_P001	Maize	cytosol	40.94	31.22
KXG33814	Sorghum	cytosol, mitochondrion	37.74	31.11
Zm00001d047867_P001	Maize	cytosol	21.54	30.7
Os05t0426100-00	Rice	cytosol	43.5	30.63
Os01t0881100-01	Rice	mitochondrion	33.48	30.13
Zm00001d012220_P001	Maize	cytosol, mitochondrion, nucleus, plastid	35.61	30.09
TraesCS1D01G266400.1	Wheat	mitochondrion	42.22	29.91
CDY04095	Canola	cytosol	24.95	20.49
CDY41768	Canola	cytosol, mitochondrion	17.27	20.35
CDY71126	Canola	cytosol, mitochondrion	18.34	20.19
CDY17660	Canola	cytosol	24.31	19.96
CDY17459	Canola	cytosol	24.09	19.82
CDY09433	Canola	cytosol, mitochondrion	24.31	19.76
CDY48813	Canola	cytosol	24.52	19.73
CDY12401	Canola	cytosol, mitochondrion	22.6	19.63
CDY36239	Canola	cytosol	23.88	19.61
CDY52732	Canola	cytosol	24.09	19.32
CDY42239	Canola	cytosol	13.86	19.29
CDY38276	Canola	cytosol	24.31	19.26
CDY18283	Canola	cytosol, nucleus, peroxisome	19.4	18.96
CDX89382	Canola	cytosol	22.81	17.8
CDY53396	Canola	cytosol	22.39	17.65
CDY47927	Canola	cytosol	18.98	17.62
CDX94400	Canola	cytosol	22.39	17.62
CDY15531	Canola	cytosol, golgi, nucleus	22.81	17.54
CDY01884	Canola	mitochondrion	12.58	16.53
CDY45299	Canola	mitochondrion	23.45	15.99
CDY12691	Canola	mitochondrion	12.37	15.93
CDY53525	Canola	cytosol, mitochondrion	23.67	15.93
CDX81471	Canola	mitochondrion	12.37	15.76
CDX86594	Canola	cytosol, golgi, nucleus	21.75	15.69
CDX96047	Canola	mitochondrion	11.94	15.51
CDY64692	Canola	mitochondrion	12.15	15.04
CDY03862	Canola	mitochondrion	11.94	14.7
CDY60368	Canola	mitochondrion	11.09	13.76
CDY57160	Canola	mitochondrion	10.66	13.23
CDY45281	Canola	cytosol	9.59	13.12
CDY41097	Canola	cytosol	9.59	13.08
CDY50184	Canola	mitochondrion	9.17	11.68
CDX93766	Canola	mitochondrion	9.17	11.59

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.6.2	GO:A0A078DLY5	InterPro:ANTH_dom	EnsemblPlants:CDX89917
ProteinID:CDX89917	ProteinID:CDX89917.1	InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043
GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	EnsemblPlantsGene:GSBRNA2T00150400001	InterPro:IPR008942	InterPro:IPR013809
InterPro:IPR014712	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF12	SUPFAM:SSF48464
SUPFAM:SSF89009	UniParc:UPI0004EE02E6	SEG:seg	:	:	:

Description

BnaA10g01650D

Coordinates

chrLK031861:-:773996..776128

Molecular Weight (calculated)

52538.3 Da

IEP (calculated)

4.200

GRAVY (calculated)

-0.593

Length

469 amino acids

Sequence
(BLAST)

001: MSDFRDVSRS NSWDYSAFVR TYALYLDERL DFRMQTRHGK RGVYCVGGGD AVEDEKDKHE ADLSTAIVVR SQPIAEMKTE KIFTRVQHLQ QLLDRFLACR
101: PTGGARNNRV VIVALYPIVK ESFQIYYDIT EIMGVLIERF MELDIPDSIK VYDIFCRVSK QFEELDQFYS WCKNMGIARS SEYPEIEKIT QKKLDLMDEF
201: IKDKSTLDQT KESQSVEEDD DERAEEVNEE EEDMNAIKAL PAPPPKEEEE EEEQPEEEVI IEKKQEEVGD LLDLVDINGN EALEAGDSLA LALFDGPYAS
301: GSGAETGPGW EAFNDDGADW ETALVQTATK LSGQKTELGG GFDMLLLNGM YQHGTVNAAV QTSTAYGASG SASSMAFGSA GRPAATMLAL PAPATANGNS
401: NGTVPMDPFA ASLEVAPPAY VQMNDMEKKQ RKLMEEQMMW DQYSREGRQG HMNLSQNQNK PSYSYTPQY

Best Arabidopsis Sequence Match ( AT1G03050.1 )
(BLAST)

001: MGSSKFKRAI GAVKDQTSVG LAKVNGRSAS LSELDVAIVK ATRHEEFPAE EKYIREILSL TSYSRSYINA CVSTLSRRLN KTKCWTVALK TLILIQRLLG
101: EGDQAYEQEI FFATRRGTRL LNMSDFRDVS RSNSWDYSAF VRTYALYLDE RLDFRMQARH GKRGVYCVGG EADEEEQDQA AADLSTAIVV RSQPIAEMKT
201: EQIFIRIQHL QQLLDRFLAC RPTGNARNNR VVIVALYPIV KESFQIYYDV TEIMGILIER FMELDIPDSI KVYDIFCRVS KQFEELDQFY SWCKNMGIAR
301: SSEYPEIEKI TQKKLDLMDE FIRDKSALEH TKQSKSVKSE ADEDDDEART EEVNEEQEDM NAIKALPEPP PKEEDDVKPE EEAKEEVIIE KKQEEMGDLL
401: DLGNTNGGEA GQAGDSLALA LFDGPYASGS GSESGPGWEA FKDDSADWET ALVQTATNLS GQKSELGGGF DMLLLNGMYQ HGAVNAAVKT STAYGASGSA
501: SSMAFGSAGR PAATMLALPA PSTANGNAGN INSPVPMDPF AASLEVAPPA YVQMNDMEKK QRMLMEEQMM WDQYSRDGRQ GHMNLRQNQN QPYSYTPQY

Arabidopsis Description

Putative clathrin assembly protein At1g03050 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA65]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.