Factsheet for HORVU1Hr1G065590.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G000720.3	Barley	cytosol	98.84	98.84
TraesCS1A01G266200.1	Wheat	cytosol	88.12	88.26
TraesCS1B01G277200.1	Wheat	cytosol	87.62	87.77
TraesCS1D01G266400.1	Wheat	mitochondrion	87.79	80.36
EES18258	Sorghum	cytosol	73.43	71.43
Zm00001d010228_P001	Maize	cytosol	70.3	69.27
Os05t0426100-00	Rice	cytosol	71.95	65.47
GSMUA_Achr11P...	Banana	cytosol	45.54	53.08
GSMUA_Achr10P...	Banana	mitochondrion	43.23	51.88
GSMUA_Achr6P18600_001	Banana	cytosol, mitochondrion	45.38	51.79
VIT_12s0055g00790.t01	Wine grape	cytosol, mitochondrion	48.18	50.17
KRH10492	Soybean	cytosol, mitochondrion	48.68	49.5
KRH43936	Soybean	cytosol, mitochondrion	48.35	49.41
KRH58332	Soybean	mitochondrion	46.2	47.86
PGSC0003DMT400076552	Potato	cytosol, mitochondrion	45.87	47.77
CDY15448	Canola	mitochondrion	45.05	47.73
Solyc01g104870.2.1	Tomato	cytosol, mitochondrion	45.71	47.68
CDY32494	Canola	mitochondrion	44.88	47.55
Bra032561.1-P	Field mustard	mitochondrion	46.37	47.07
PGSC0003DMT400059062	Potato	cytosol	46.2	46.98
Bra030518.1-P	Field mustard	mitochondrion	45.38	46.61
AT1G03050.1	Thale cress	cytosol, mitochondrion	45.71	46.24
Bra036250.1-P	Field mustard	mitochondrion	45.71	46.09
CDY21904	Canola	mitochondrion	45.54	46.08
CDY22070	Canola	mitochondrion	45.71	46.01
AT4G02650.1	Thale cress	mitochondrion	45.71	45.34
Solyc11g044860.1.1	Tomato	cytosol	35.81	43.4
HORVU4Hr1G059660.3	Barley	cytosol, mitochondrion, plastid	45.21	42.41
CDY18145	Canola	cytosol	32.51	42.27
Bra033369.1-P	Field mustard	cytosol	32.67	42.22
CDX89917	Canola	cytosol	32.51	42.0
HORVU1Hr1G005290.1	Barley	cytosol	38.78	38.03
CDY37444	Canola	nucleus	16.67	35.94
HORVU7Hr1G028590.1	Barley	cytosol	28.22	30.27
HORVU7Hr1G109970.5	Barley	cytosol	26.07	27.62
HORVU7Hr1G097510.7	Barley	mitochondrion	23.1	27.4
CDX86691	Canola	cytosol, mitochondrion	45.05	27.0
HORVU6Hr1G087330.4	Barley	cytosol	24.92	25.95
HORVU1Hr1G078340.3	Barley	plastid	27.06	25.91
HORVU6Hr1G030980.1	Barley	cytosol	24.92	24.39
HORVU4Hr1G015050.1	Barley	mitochondrion	13.04	20.0
HORVU5Hr1G078270.1	Barley	cytosol	13.86	19.05
HORVU7Hr1G089710.1	Barley	mitochondrion	5.12	17.51

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.6.2	UniProt:A0A287G033	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2
InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543
GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268
EnsemblPlantsGene:HORVU1Hr1G065590	EnsemblPlants:HORVU1Hr1G065590.1	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651
PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF12	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009
UniParc:UPI000B47C13F	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:468036434..468038518

Molecular Weight (calculated)

66009.1 Da

IEP (calculated)

4.459

GRAVY (calculated)

-0.306

Length

606 amino acids

Sequence
(BLAST)

001: MAPSKLRKAL GAVKDQTSIG LAKVGGGSGF ASSELEVAIV KATKHDESFP ADERHIREIV SLTRHSRGSA GACVAALSRR LGRTRSWDVA LKTLVIVHRL
101: LADGEPVFEQ ELFYATRRGT RMLNMSDFCG RTSDDAWDFS AFVRTYAAYL DDRLEYRIQA RQGGPNRCKL LRDELYMSPG NNFGYDGVNG SRREDAAADA
201: DAAKAVAIVP RETPTSEMTL EQLLGKVQQL QHLLDRFIAC QPAGAAKTNR VVTVSLYPLV KESVQLYCEL TEVMAALIEQ FPDMETADCE RVHGVFCGLA
301: KQIDELDSFY AWCKDAYVCR QSDVPEVEVI TQKKLELMDE FICDRRSAES QQRLPTPSPE PSSPEPEVEN EEYDINATRA LPAPAEPPAA VEQEQDAGET
401: AQAEQEAPLI TTGVVDEEAD LLNLKADAMS GEEHGRQLAL ALFDVDPAGS APTCDVFDPS SADWETALVE SASALANQRA LLGGGLNMMV LDGMYNHATA
501: ANAQVFSGSA SSVALRPPGA PMLALPAPPG MCSLAPGADP FAASMVVPPP TYVQMSDMQT KQQLLTEEKM VWQQYDKNGM QGQGGLTMLE QRPQQFMSTL
601: LQDNRT

Best Arabidopsis Sequence Match ( AT1G03050.1 )
(BLAST)

001: MGSSKFKRAI GAVKDQTSVG LAKVNGRSAS LSELDVAIVK ATRHEEFPAE EKYIREILSL TSYSRSYINA CVSTLSRRLN KTKCWTVALK TLILIQRLLG
101: EGDQAYEQEI FFATRRGTRL LNMSDFRDVS RSNSWDYSAF VRTYALYLDE RLDFRMQARH GKRGVYCVGG EADEEEQDQA AADLSTAIVV RSQPIAEMKT
201: EQIFIRIQHL QQLLDRFLAC RPTGNARNNR VVIVALYPIV KESFQIYYDV TEIMGILIER FMELDIPDSI KVYDIFCRVS KQFEELDQFY SWCKNMGIAR
301: SSEYPEIEKI TQKKLDLMDE FIRDKSALEH TKQSKSVKSE ADEDDDEART EEVNEEQEDM NAIKALPEPP PKEEDDVKPE EEAKEEVIIE KKQEEMGDLL
401: DLGNTNGGEA GQAGDSLALA LFDGPYASGS GSESGPGWEA FKDDSADWET ALVQTATNLS GQKSELGGGF DMLLLNGMYQ HGAVNAAVKT STAYGASGSA
501: SSMAFGSAGR PAATMLALPA PSTANGNAGN INSPVPMDPF AASLEVAPPA YVQMNDMEKK QRMLMEEQMM WDQYSRDGRQ GHMNLRQNQN QPYSYTPQY

Arabidopsis Description

Putative clathrin assembly protein At1g03050 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA65]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.