CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036250.1-P	Field mustard	mitochondrion	98.5	98.67
CDY21904	Canola	mitochondrion	96.68	97.16
AT4G02650.1	Thale cress	mitochondrion	82.23	81.01
CDY15448	Canola	mitochondrion	68.77	72.38
CDY32494	Canola	mitochondrion	66.45	69.93
CDX89917	Canola	cytosol	54.15	69.51
CDY18145	Canola	cytosol	53.65	69.31
VIT_12s0055g00790.t01	Wine grape	cytosol, mitochondrion	58.64	60.65
KRH43936	Soybean	cytosol, mitochondrion	58.97	59.87
CDY37444	Canola	nucleus	27.74	59.43
KRH58332	Soybean	mitochondrion	57.31	58.97
KRH10492	Soybean	cytosol, mitochondrion	57.81	58.39
GSMUA_Achr6P18600_001	Banana	cytosol, mitochondrion	50.83	57.63
PGSC0003DMT400076552	Potato	cytosol, mitochondrion	54.82	56.7
Solyc01g104870.2.1	Tomato	cytosol, mitochondrion	54.49	56.45
GSMUA_Achr11P...	Banana	cytosol	47.34	54.81
GSMUA_Achr10P...	Banana	mitochondrion	45.35	54.06
PGSC0003DMT400059062	Potato	cytosol	52.49	53.02
Solyc11g044860.1.1	Tomato	cytosol	42.52	51.2
HORVU1Hr1G065590.1	Barley	cytosol	46.01	45.71
HORVU0Hr1G000720.3	Barley	cytosol	45.85	45.54
TraesCS1A01G266200.1	Wheat	cytosol	45.68	45.45
CDY35361	Canola	cytosol	44.35	45.18
CDY11530	Canola	cytosol	43.52	45.17
CDX76976	Canola	cytosol	44.35	45.03
TraesCS1B01G277200.1	Wheat	cytosol	45.18	44.96
EES18258	Sorghum	cytosol	46.51	44.94
CDX68831	Canola	cytosol	43.19	43.99
CDX75232	Canola	cytosol	43.19	43.84
Os01t0881100-01	Rice	mitochondrion	37.87	43.76
Zm00001d010228_P001	Maize	cytosol	44.68	43.74
Os05t0426100-00	Rice	cytosol	48.01	43.39
KXG33814	Sorghum	cytosol, mitochondrion	39.87	42.18
TraesCS1D01G266400.1	Wheat	mitochondrion	45.85	41.69
Zm00001d012220_P001	Maize	cytosol, mitochondrion, nucleus, plastid	37.71	40.9
CDX86691	Canola	cytosol, mitochondrion	67.77	40.36
CDX76760	Canola	cytosol	29.73	38.33
CDX76977	Canola	cytosol	32.06	36.97
CDY41768	Canola	cytosol, mitochondrion	22.76	34.42
CDY71126	Canola	cytosol, mitochondrion	23.75	33.57
CDY42239	Canola	cytosol	18.77	33.53
CDY12401	Canola	cytosol, mitochondrion	27.74	30.93
CDY18283	Canola	cytosol, nucleus, peroxisome	24.25	30.42
Zm00001d047867_P001	Maize	cytosol	16.61	30.4
CDY04095	Canola	cytosol	27.57	29.07
CDY17459	Canola	cytosol	27.41	28.95
CDY17660	Canola	cytosol	27.41	28.9
CDY36239	Canola	cytosol	27.08	28.55
CDY09433	Canola	cytosol, mitochondrion	27.08	28.25
CDY48813	Canola	cytosol	27.24	28.13
CDY52732	Canola	cytosol	27.08	27.86
CDY47927	Canola	cytosol	23.26	27.72
CDY38276	Canola	cytosol	27.24	27.7
CDY15531	Canola	cytosol, golgi, nucleus	26.91	26.56
CDY53396	Canola	cytosol	26.25	26.55
CDX89382	Canola	cytosol	25.42	25.46
CDX94400	Canola	cytosol	25.08	25.34
CDX81471	Canola	mitochondrion	14.78	24.18
CDY50184	Canola	mitochondrion	14.78	24.18
CDY12691	Canola	mitochondrion	14.62	24.18
CDX86594	Canola	cytosol, golgi, nucleus	25.75	23.85
CDX93766	Canola	mitochondrion	14.62	23.72
CDY45299	Canola	mitochondrion	26.91	23.55
CDY53525	Canola	cytosol, mitochondrion	27.24	23.53
CDY01884	Canola	mitochondrion	13.95	23.53
CDY45281	Canola	cytosol	13.29	23.32
CDY41097	Canola	cytosol	13.12	22.97
CDY64692	Canola	mitochondrion	14.29	22.69
CDY03862	Canola	mitochondrion	14.29	22.57
CDX96047	Canola	mitochondrion	13.29	22.16
CDY57160	Canola	mitochondrion	13.62	21.69
CDY60368	Canola	mitochondrion	13.62	21.69

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.6.2	GO:A0A078G6H8	UniProt:A0A078G6H8	InterPro:ANTH_dom
EnsemblPlants:CDY22070	ProteinID:CDY22070	ProteinID:CDY22070.1	InterPro:Clathrin_AP_dom2	ncoils:Coil	InterPro:ENTH
InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289
GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	EnsemblPlantsGene:GSBRNA2T00018452001
InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951
PANTHER:PTHR22951:SF12	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI0004EEC196	SEG:seg

Description

BnaA09g00990DBnaA09g00990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G6H8]

Coordinates

chrLK032127:+:421317..423931

Molecular Weight (calculated)

67178.1 Da

IEP (calculated)

4.851

GRAVY (calculated)

-0.527

Length

602 amino acids

Sequence
(BLAST)

001: MSSSKLRRAI GAVKDQTSVG LAKVGGRSSS LTELEVAIVK ATRHDEYPAE EKYVREILSL TSYSRNYVSA CVSILSRRLN RTKNWSVALK ALILIQRMLT
101: QGDKAYEEEI FFATRRGTRL LNMSDFRDAD GSDSWDYSAF VRTYALYLDE RLDFRMQRRK GKNVDGGGGG GDDDSGDEEE DDHREANANV RSRALVVKTK
201: PVKEMKTEKI FIRVQHLQQL LDRFLACRPT GNAKNNRVVI VALYPIVKDS FQIYCNVTEI MGVLIDRFME LDVHDSIKVY DIFSRVSKQL DELDPFHGWC
301: KKMGVARSSE YPELEKITQK KLDIMDEFIK DKSLLAAQAL MSPSRKSNKS EEEEVKDIQE DLNAVKALPA PEQEEEEEEK EETETKKDFE EVVPRQDQEG
401: DLLDLTGEAG DTTLSVGDSL ALALFDGAVA TEAASGPGWE AFDDDSADWE TALVKSATRL SAQKSELGGG FDHLLLDGMY QYGAVNAAVN AYGSSGSASS
501: VAFGSAGRPA ASMLALPAPP PTSNGNGGRS LVTMDPFAAS LEVVPPSYVQ MSDMEKKQRL VMEEQMMWDQ YNRNGRLGHM QNQQQHFHVP YSMGPYSYTP
601: HY

Best Arabidopsis Sequence Match ( AT4G02650.1 )
(BLAST)

001: MGSSKLKRAI GAVKDQTSVG LAKVGGRSSS LTELEIAVVK ATRHDDYPAE DKYIREILCL TSYSRNYVSA CVATLSRRLN KTKNWSVALK TLILIQRLLT
101: DGDRAYEQEI FFATRRGTRL LNMSDFRDAS QSDSWDYSAF VRTYALYLDE RLDYRMQGRR GKKKSGGGGG GDGDSGEEDD HRGTSNDIRS KAIVVKSKPV
201: AEMKTEKIFN RVQHLQQLLD RFLACRPTGN AKNNRVVIVA MYPIVKESFQ LYYNITEIMG VLIERFMELD IHDSIKVYEI FCRVSKQFDE LDPFYGWCKN
301: MAVARSSEYP ELEKITQKKL DLMDEFIRDK SALAAQTTKS SSKRSNKSEE EESKTEYIQE NQEDLNSIKA LPAPEQKEEE EEEEKMETKK DVEEVVSRQD
401: QEGDLLDLTD EAGVTAGTVG DSLALALFDG VVGTESASGP GWEAFNDNSA DWETDLVRSA TRLSGQKSEL GGGFDTLLLD GMYQYGAVNA AVKTSTAYGS
501: SGSASSVAFG SAGSPAASML ALPAPPPTAN GNRNSPVMVD PFAASLEVAP PAYVQMNDME KKQRLLMEEQ IMWDQYNRSG RQGHMNFGQN QQQQYYQLPY
601: SMGPYSYTPR Y

Arabidopsis Description

Putative clathrin assembly protein At4g02650 [Source:UniProtKB/Swiss-Prot;Acc:Q8GX47]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.