Factsheet for TraesCS1A01G266200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G277200.1	Wheat	cytosol	93.72	93.72
HORVU1Hr1G065590.1	Barley	cytosol	88.26	88.12
HORVU0Hr1G000720.3	Barley	cytosol	87.77	87.62
TraesCS1D01G266400.1	Wheat	mitochondrion	94.55	86.4
EES18258	Sorghum	cytosol	70.74	68.7
Zm00001d010228_P001	Maize	cytosol	69.09	67.97
Os05t0426100-00	Rice	cytosol	70.74	64.26
GSMUA_Achr10P...	Banana	mitochondrion	43.31	51.88
GSMUA_Achr11P...	Banana	cytosol	44.13	51.35
GSMUA_Achr6P18600_001	Banana	cytosol, mitochondrion	44.96	51.22
VIT_12s0055g00790.t01	Wine grape	cytosol, mitochondrion	48.1	50.0
KRH10492	Soybean	cytosol, mitochondrion	47.93	48.66
KRH43936	Soybean	cytosol, mitochondrion	47.6	48.57
PGSC0003DMT400076552	Potato	cytosol, mitochondrion	45.62	47.42
CDY32494	Canola	mitochondrion	44.79	47.38
Solyc01g104870.2.1	Tomato	cytosol, mitochondrion	45.29	47.16
Bra032561.1-P	Field mustard	mitochondrion	46.28	46.9
CDY15448	Canola	mitochondrion	44.3	46.85
KRH58332	Soybean	mitochondrion	45.12	46.67
AT1G03050.1	Thale cress	cytosol, mitochondrion	45.79	46.24
PGSC0003DMT400059062	Potato	cytosol	45.12	45.81
Bra030518.1-P	Field mustard	mitochondrion	44.63	45.76
Bra036250.1-P	Field mustard	mitochondrion	45.45	45.76
CDY21904	Canola	mitochondrion	45.29	45.74
CDY22070	Canola	mitochondrion	45.45	45.68
AT4G02650.1	Thale cress	mitochondrion	44.96	44.52
TraesCS4A01G097200.1	Wheat	cytosol, mitochondrion, plastid	46.12	43.73
Solyc11g044860.1.1	Tomato	cytosol	35.87	43.4
CDY18145	Canola	cytosol	32.4	42.06
Bra033369.1-P	Field mustard	cytosol	32.56	42.0
CDX89917	Canola	cytosol	32.4	41.79
TraesCS1A01G035100.1	Wheat	cytosol	41.49	40.75
CDY37444	Canola	nucleus	17.02	36.65
TraesCS7A01G138400.1	Wheat	cytosol	28.43	30.5
TraesCS1A01G369700.1	Wheat	cytosol, mitochondrion, plastid	27.27	29.2
TraesCS7A01G421900.1	Wheat	mitochondrion	27.27	28.95
TraesCS3A01G258900.1	Wheat	cytosol	25.95	28.09
TraesCS7A01G490500.2	Wheat	cytosol	26.12	27.53
CDX86691	Canola	cytosol, mitochondrion	44.46	26.61
TraesCS6A01G370500.1	Wheat	cytosol	25.45	26.46
TraesCS6A01G154100.1	Wheat	cytosol	25.62	26.45
TraesCS5A01G297400.1	Wheat	mitochondrion	13.88	22.28
TraesCS4A01G227800.1	Wheat	mitochondrion	13.06	20.0

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.6.2	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2	InterPro:ENTH
InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289
GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942
InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF12
SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	EnsemblPlantsGene:TraesCS1A01G266200	EnsemblPlants:TraesCS1A01G266200.1	TIGR:cd03564
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:461768875..461770800

Molecular Weight (calculated)

65647.7 Da

IEP (calculated)

4.587

GRAVY (calculated)

-0.344

Length

605 amino acids

Sequence
(BLAST)

001: MAPSKLRKAL GAVKDKTSIG LAKVGGGSGF ASPELEVAIV KATKHDENFP ADERHIREIV SLTRDSRGSA SACVAALSRR LGRTRSWDVA LKTLVIVHRL
101: LAEGDPVFEQ ELFYATRRGT RMLNMSDFCG RASDDDAWDY SAFVRTYAAY LDDRLEHRIQ ARQGGPNRCK LLRDELYVSP GDRLSREGVD GSKREDAAAD
201: ADAAKAGAIA PRETPTSEMT LEQLLAKVQQ LQHLLDRFIA CRPAGAAKTN RVVSVSLYPL VKESVQLYCE LTEVMAALME RFPDMESADC ERVTGVFCGL
301: AKQIEDLDSF YAWCKDAYVC RQSDVPEVEV ITQERLELMD EFICDRRGAE YLRRLPPPSP EPSSPEPEVE EYDMSAARAL PAPAEPPAAV EKEPDASETA
401: HAEPEAPLIT TDVVDEEADF LNLKADAMSG EEHGRQLALA LFDGNPAGSA PTCDVFDPSS ADWETALVES ASALANQRAM LGGGLDMMAL EGMYNHATAA
501: NAQAFSGSAS SVALRPPGAP MLALPAPPGM CSAAPGGDPF AASMVVPPPT YVQMSDMQTK QQLLTEEQMA WQQYGKNGMQ GQGGLAMREQ RPQQLMPPGV
601: YHRAS

Best Arabidopsis Sequence Match ( AT1G03050.1 )
(BLAST)

001: MGSSKFKRAI GAVKDQTSVG LAKVNGRSAS LSELDVAIVK ATRHEEFPAE EKYIREILSL TSYSRSYINA CVSTLSRRLN KTKCWTVALK TLILIQRLLG
101: EGDQAYEQEI FFATRRGTRL LNMSDFRDVS RSNSWDYSAF VRTYALYLDE RLDFRMQARH GKRGVYCVGG EADEEEQDQA AADLSTAIVV RSQPIAEMKT
201: EQIFIRIQHL QQLLDRFLAC RPTGNARNNR VVIVALYPIV KESFQIYYDV TEIMGILIER FMELDIPDSI KVYDIFCRVS KQFEELDQFY SWCKNMGIAR
301: SSEYPEIEKI TQKKLDLMDE FIRDKSALEH TKQSKSVKSE ADEDDDEART EEVNEEQEDM NAIKALPEPP PKEEDDVKPE EEAKEEVIIE KKQEEMGDLL
401: DLGNTNGGEA GQAGDSLALA LFDGPYASGS GSESGPGWEA FKDDSADWET ALVQTATNLS GQKSELGGGF DMLLLNGMYQ HGAVNAAVKT STAYGASGSA
501: SSMAFGSAGR PAATMLALPA PSTANGNAGN INSPVPMDPF AASLEVAPPA YVQMNDMEKK QRMLMEEQMM WDQYSRDGRQ GHMNLRQNQN QPYSYTPQY

Arabidopsis Description

Putative clathrin assembly protein At1g03050 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA65]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.