Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18145 | Canola | cytosol | 81.49 | 49.14 |
| CDX89917 | Canola | cytosol | 81.49 | 48.83 |
| Bra032561.1-P | Field mustard | mitochondrion | 97.51 | 45.9 |
| CDY32494 | Canola | mitochondrion | 88.97 | 43.71 |
| AT1G03050.1 | Thale cress | cytosol, mitochondrion | 82.92 | 38.9 |
| CDY15448 | Canola | mitochondrion | 74.73 | 36.71 |
| CDY22070 | Canola | mitochondrion | 59.43 | 27.74 |
| CDY21904 | Canola | mitochondrion | 59.07 | 27.71 |
| Solyc11g044860.1.1 | Tomato | cytosol | 44.48 | 25.0 |
| VIT_12s0055g00790.t01 | Wine grape | cytosol, mitochondrion | 51.25 | 24.74 |
| PGSC0003DMT400076552 | Potato | cytosol, mitochondrion | 49.47 | 23.88 |
| Solyc01g104870.2.1 | Tomato | cytosol, mitochondrion | 49.11 | 23.75 |
| KRH43936 | Soybean | cytosol, mitochondrion | 49.82 | 23.61 |
| KRH10492 | Soybean | cytosol, mitochondrion | 49.47 | 23.32 |
| KRH58332 | Soybean | mitochondrion | 48.04 | 23.08 |
| CDX86691 | Canola | cytosol, mitochondrion | 77.58 | 21.56 |
| CDX76977 | Canola | cytosol | 39.86 | 21.46 |
| PGSC0003DMT400059062 | Potato | cytosol | 42.7 | 20.13 |
| CDX76760 | Canola | cytosol | 33.1 | 19.91 |
| GSMUA_Achr6P18600_001 | Banana | cytosol, mitochondrion | 36.65 | 19.4 |
| CDY11530 | Canola | cytosol | 39.86 | 19.31 |
| CDX76976 | Canola | cytosol | 39.86 | 18.89 |
| CDY35361 | Canola | cytosol | 39.5 | 18.78 |
| CDX68831 | Canola | cytosol | 37.72 | 17.94 |
| CDX75232 | Canola | cytosol | 37.37 | 17.71 |
| GSMUA_Achr10P... | Banana | mitochondrion | 31.32 | 17.43 |
| TraesCS1A01G266200.1 | Wheat | cytosol | 36.65 | 17.02 |
| TraesCS1B01G277200.1 | Wheat | cytosol | 36.3 | 16.86 |
| EES18258 | Sorghum | cytosol | 37.37 | 16.85 |
| HORVU1Hr1G065590.1 | Barley | cytosol | 35.94 | 16.67 |
| Zm00001d010228_P001 | Maize | cytosol | 35.94 | 16.42 |
| HORVU0Hr1G000720.3 | Barley | cytosol | 35.23 | 16.34 |
| Os05t0426100-00 | Rice | cytosol | 38.43 | 16.22 |
| GSMUA_Achr11P... | Banana | cytosol | 29.54 | 15.96 |
| KXG33814 | Sorghum | cytosol, mitochondrion | 32.03 | 15.82 |
| TraesCS1D01G266400.1 | Wheat | mitochondrion | 37.01 | 15.71 |
| Zm00001d012220_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 30.25 | 15.32 |
| Os01t0881100-01 | Rice | mitochondrion | 24.56 | 13.24 |
| CDY38276 | Canola | cytosol | 18.86 | 8.95 |
| CDY52732 | Canola | cytosol | 18.51 | 8.89 |
| CDY04095 | Canola | cytosol | 17.44 | 8.58 |
| CDY17660 | Canola | cytosol | 17.44 | 8.58 |
| CDY12401 | Canola | cytosol, mitochondrion | 16.37 | 8.52 |
| CDY17459 | Canola | cytosol | 17.08 | 8.42 |
| CDY36239 | Canola | cytosol | 17.08 | 8.41 |
| CDY48813 | Canola | cytosol | 17.08 | 8.23 |
| CDY09433 | Canola | cytosol, mitochondrion | 16.73 | 8.15 |
| CDX89382 | Canola | cytosol | 16.37 | 7.65 |
| CDX94400 | Canola | cytosol | 16.01 | 7.55 |
| CDY53525 | Canola | cytosol, mitochondrion | 17.44 | 7.03 |
| CDY45299 | Canola | mitochondrion | 17.08 | 6.98 |
| Zm00001d047867_P001 | Maize | cytosol | 7.47 | 6.38 |
| CDY71126 | Canola | cytosol, mitochondrion | 8.54 | 5.63 |
| CDY47927 | Canola | cytosol | 9.25 | 5.15 |
| CDY41768 | Canola | cytosol, mitochondrion | 6.76 | 4.77 |
| CDY15531 | Canola | cytosol, golgi, nucleus | 10.32 | 4.75 |
| CDY53396 | Canola | cytosol | 9.96 | 4.71 |
| CDX81471 | Canola | mitochondrion | 4.98 | 3.8 |
| CDY01884 | Canola | mitochondrion | 4.63 | 3.64 |
| CDY12691 | Canola | mitochondrion | 4.63 | 3.57 |
| CDX86594 | Canola | cytosol, golgi, nucleus | 8.19 | 3.54 |
| CDY64692 | Canola | mitochondrion | 4.27 | 3.17 |
| CDY03862 | Canola | mitochondrion | 4.27 | 3.15 |
| CDX96047 | Canola | mitochondrion | 3.91 | 3.05 |
| CDY18283 | Canola | cytosol, nucleus, peroxisome | 4.98 | 2.92 |
| CDY57160 | Canola | mitochondrion | 3.2 | 2.38 |
| CDY60368 | Canola | mitochondrion | 3.2 | 2.38 |
| CDX93766 | Canola | mitochondrion | 2.49 | 1.89 |
| CDY41097 | Canola | cytosol | 2.14 | 1.74 |
| CDY50184 | Canola | mitochondrion | 2.14 | 1.63 |
| CDY42239 | Canola | cytosol | 1.78 | 1.48 |
| CDY45281 | Canola | cytosol | 1.78 | 1.46 |
Protein Annotations
| EnsemblPlants:CDY37444 | EnsemblPlantsGene:GSBRNA2T00064023001 | ncoils:Coil | PANTHER:PTHR22951 | PANTHER:PTHR22951:SF12 | ProteinID:CDY37444 |
| ProteinID:CDY37444.1 | SEG:seg | UniParc:UPI0004EEB8C3 | UniProt:A0A078HJC3 | MapMan:35.1 | : |
Description
BnaC08g45820DBnaC08g45820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJC3]
Coordinates
chrLK032400:-:127303..128222
Molecular Weight (calculated)
30353.6 Da
IEP (calculated)
3.806
GRAVY (calculated)
-0.703
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEFIRDKTA LEETNNSKSV NEEDDDEARE EEVNEEQEED MNAIKALPAP PPKEDEEEKT EEEAEEPVII EEENKKEEVG DLLDLVDISS GEAGAAGDNL
101: ALALFDGPYA SGSGSESGPG WEAFKDDGAD WETALVQSAT NLSGQKTELG GGFDMLLLNG MYQHGTVNAA VQTSTAYGTS GSASSMAFGS AGRPAATVLA
201: LPAPATANGS SNGPVVPMDP FAASLVVAPP AYVQMNEMEK KQRMLMEEQI MWEQFSREGR QGHMNIRQNQ NQPNYSYTPQ Y
101: ALALFDGPYA SGSGSESGPG WEAFKDDGAD WETALVQSAT NLSGQKTELG GGFDMLLLNG MYQHGTVNAA VQTSTAYGTS GSASSMAFGS AGRPAATVLA
201: LPAPATANGS SNGPVVPMDP FAASLVVAPP AYVQMNEMEK KQRMLMEEQI MWEQFSREGR QGHMNIRQNQ NQPNYSYTPQ Y
001: MGSSKFKRAI GAVKDQTSVG LAKVNGRSAS LSELDVAIVK ATRHEEFPAE EKYIREILSL TSYSRSYINA CVSTLSRRLN KTKCWTVALK TLILIQRLLG
101: EGDQAYEQEI FFATRRGTRL LNMSDFRDVS RSNSWDYSAF VRTYALYLDE RLDFRMQARH GKRGVYCVGG EADEEEQDQA AADLSTAIVV RSQPIAEMKT
201: EQIFIRIQHL QQLLDRFLAC RPTGNARNNR VVIVALYPIV KESFQIYYDV TEIMGILIER FMELDIPDSI KVYDIFCRVS KQFEELDQFY SWCKNMGIAR
301: SSEYPEIEKI TQKKLDLMDE FIRDKSALEH TKQSKSVKSE ADEDDDEART EEVNEEQEDM NAIKALPEPP PKEEDDVKPE EEAKEEVIIE KKQEEMGDLL
401: DLGNTNGGEA GQAGDSLALA LFDGPYASGS GSESGPGWEA FKDDSADWET ALVQTATNLS GQKSELGGGF DMLLLNGMYQ HGAVNAAVKT STAYGASGSA
501: SSMAFGSAGR PAATMLALPA PSTANGNAGN INSPVPMDPF AASLEVAPPA YVQMNDMEKK QRMLMEEQMM WDQYSRDGRQ GHMNLRQNQN QPYSYTPQY
101: EGDQAYEQEI FFATRRGTRL LNMSDFRDVS RSNSWDYSAF VRTYALYLDE RLDFRMQARH GKRGVYCVGG EADEEEQDQA AADLSTAIVV RSQPIAEMKT
201: EQIFIRIQHL QQLLDRFLAC RPTGNARNNR VVIVALYPIV KESFQIYYDV TEIMGILIER FMELDIPDSI KVYDIFCRVS KQFEELDQFY SWCKNMGIAR
301: SSEYPEIEKI TQKKLDLMDE FIRDKSALEH TKQSKSVKSE ADEDDDEART EEVNEEQEDM NAIKALPEPP PKEEDDVKPE EEAKEEVIIE KKQEEMGDLL
401: DLGNTNGGEA GQAGDSLALA LFDGPYASGS GSESGPGWEA FKDDSADWET ALVQTATNLS GQKSELGGGF DMLLLNGMYQ HGAVNAAVKT STAYGASGSA
501: SSMAFGSAGR PAATMLALPA PSTANGNAGN INSPVPMDPF AASLEVAPPA YVQMNDMEKK QRMLMEEQMM WDQYSRDGRQ GHMNLRQNQN QPYSYTPQY
Arabidopsis Description
Putative clathrin assembly protein At1g03050 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA65]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.