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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • cytosol 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75232 Canola cytosol 98.48 98.14
Bra011333.1-P Field mustard cytosol 98.31 92.66
CDX76976 Canola cytosol 85.62 85.33
CDY35361 Canola cytosol 84.77 84.77
AT4G32285.2 Thale cress cytosol 90.36 84.09
CDY11530 Canola cytosol 78.17 79.66
CDX76977 Canola cytosol 66.84 75.67
CDX76760 Canola cytosol 58.88 74.52
KRH52429 Soybean endoplasmic reticulum 79.19 73.01
KRH05593 Soybean cytosol 10.49 72.09
KRH61760 Soybean mitochondrion 77.5 70.25
Solyc08g059660.1.1 Tomato cytosol 74.96 69.65
PGSC0003DMT400035762 Potato cytosol 75.13 69.48
PGSC0003DMT400040963 Potato cytosol 74.28 68.49
Zm00001d030399_P001 Maize cytosol 39.93 67.43
VIT_04s0008g05540.t01 Wine grape cytosol 75.63 67.42
TraesCS4D01G208100.1 Wheat cytosol, mitochondrion, plastid 63.79 67.32
Solyc06g011450.1.1 Tomato cytosol 69.54 66.94
Zm00001d046121_P001 Maize cytosol 40.61 66.12
GSMUA_Achr9P03950_001 Banana cytosol, mitochondrion, plastid 56.35 63.19
TraesCS4B01G207200.1 Wheat cytosol, mitochondrion, plastid 67.17 62.23
Zm00001d047804_P001 Maize plasma membrane 66.5 61.99
TraesCS4A01G097200.1 Wheat cytosol, mitochondrion, plastid 66.67 61.76
Zm00001d028620_P001 Maize plasma membrane 66.67 61.66
EER92480 Sorghum cytosol, mitochondrion, plastid 67.01 61.4
HORVU4Hr1G059660.3 Barley cytosol, mitochondrion, plastid 67.01 61.3
Os03t0275500-01 Rice plasma membrane 67.34 61.14
GSMUA_Achr11P... Banana cytosol 44.5 57.68
GSMUA_Achr6P33420_001 Banana cytosol, mitochondrion, plastid 56.51 52.85
Os05t0112101-01 Rice plasma membrane 51.61 52.5
TraesCS1B01G044800.1 Wheat cytosol 54.31 51.94
TraesCS1D01G036500.1 Wheat cytosol 54.15 51.78
TraesCS1A01G035100.1 Wheat cytosol 53.81 51.62
HORVU1Hr1G005290.1 Barley cytosol 52.96 50.65
Zm00001d035652_P001 Maize cytosol 47.88 47.4
EES18894 Sorghum cytosol 49.24 46.71
CDY15448 Canola mitochondrion 43.49 44.93
CDY32494 Canola mitochondrion 42.81 44.23
CDY21904 Canola mitochondrion 44.16 43.57
CDY22070 Canola mitochondrion 43.99 43.19
CDX89917 Canola cytosol 32.66 41.15
CDY18145 Canola cytosol 32.32 40.99
CDY37444 Canola nucleus 17.94 37.72
CDY42239 Canola cytosol 19.12 33.53
CDY18283 Canola cytosol, nucleus, peroxisome 26.73 32.92
CDY41768 Canola cytosol, mitochondrion 21.32 31.66
CDY71126 Canola cytosol, mitochondrion 22.67 31.46
CDY15531 Canola cytosol, golgi, nucleus 30.96 30.0
CDY53396 Canola cytosol 30.12 29.92
CDY52732 Canola cytosol 29.27 29.57
CDY12401 Canola cytosol, mitochondrion 26.73 29.26
CDY38276 Canola cytosol 29.27 29.22
CDX94400 Canola cytosol 28.93 28.69
CDX89382 Canola cytosol 29.1 28.62
CDY04095 Canola cytosol 27.58 28.55
CDY09433 Canola cytosol, mitochondrion 27.75 28.42
CDY17459 Canola cytosol 27.41 28.42
CDY17660 Canola cytosol 27.41 28.37
CDY47927 Canola cytosol 24.03 28.12
CDY36239 Canola cytosol 27.07 28.02
CDY48813 Canola cytosol 27.58 27.96
CDX86594 Canola cytosol, golgi, nucleus 29.61 26.92
CDY64692 Canola mitochondrion 17.26 26.91
CDY03862 Canola mitochondrion 17.26 26.77
CDY60368 Canola mitochondrion 17.09 26.72
CDY57160 Canola mitochondrion 16.92 26.45
CDY12691 Canola mitochondrion 15.57 25.27
CDX81471 Canola mitochondrion 15.74 25.27
CDX86691 Canola cytosol, mitochondrion 43.15 25.22
CDX93766 Canola mitochondrion 15.74 25.07
CDY50184 Canola mitochondrion 15.57 25.0
CDY01884 Canola mitochondrion 14.89 24.65
CDX96047 Canola mitochondrion 14.55 23.82
CDY53525 Canola cytosol, mitochondrion 27.92 23.67
CDY45299 Canola mitochondrion 27.41 23.55
CDY41097 Canola cytosol 13.54 23.26
CDY45281 Canola cytosol 13.37 23.03
Protein Annotations
Gene3D:1.20.58.150Gene3D:1.25.40.90MapMan:22.1.4.6MapMan:22.1.6.2GO:A0A078BVI4InterPro:ANTH_dom
EnsemblPlants:CDX68831ProteinID:CDX68831ProteinID:CDX68831.1InterPro:Clathrin_AP_dom2InterPro:ENTHInterPro:ENTH_VHS
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005543GO:GO:0005545GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150GO:GO:0008289GO:GO:0009987
GO:GO:0016043GO:GO:0030136GO:GO:0030276GO:GO:0048268EnsemblPlantsGene:GSBRNA2T00130552001InterPro:IPR008942
InterPro:IPR013809InterPro:IPR014712PFAM:PF07651PFscan:PS50942PANTHER:PTHR22951PANTHER:PTHR22951:SF13
SMART:SM00273SUPFAM:SSF48464SUPFAM:SSF89009UniParc:UPI0004EE0DEESEG:seg:
Description
BnaC01g06220D
Coordinates
chrLK031789:+:1477122..1479695
Molecular Weight (calculated)
65250.6 Da
IEP (calculated)
5.321
GRAVY (calculated)
-0.405
Length
591 amino acids
Sequence
(BLAST)
001: MALSIRKAIG VVKDQTSISI AKVASNIAPD LEVAIVKATS HDDDQSTEKY IREILSLTSL SRGYVHACVT SVARRLGKTR DWIVALKALM LVHRLLNDGD
101: PLFQEEILYA TRRGTRILNM SDFRDEAHSS SWDHSAFVRT YASYLDQRLE LALFERKGKN GGGNVNEIGG GRDVVTVTPL RDMPPEKIFG KMGHLQRLLD
201: RFLSSRPTGL AKSSRMILVA MYPIVKESFR LYADICEVLA VLLDKFFEME YTDCVKAFDA YASAAKQIDE LIAFYHWCKD TGVARSSEYP EVQRITSKLL
301: ETLEEFVRDR AKRGKSPERK EIEAPPPPAP EEAAEVDMNE IKALPPPENY TPPPPPPKPE AKVEQPQVTN DLVDLREDGV SADDQGNKFA LALFAGPVTS
401: NGKWEAFSSD NSEVTSAWQN PAAEQGKADW ELALVETASN LEHQKAAMGG GLDPLLLNGM YDQGAVRQHV STSELTGGSS SSVALPLPSK TNSHILALPA
501: PDGTVQKVNQ DPFAASLTIP PPSYVQMAEM DKKQYLLTQE QQLWQQYQQE GMRGQASLAK MSPAPNGMPY GMPPVNGMGP PPMGYYYNNP Y
Best Arabidopsis Sequence Match ( AT4G32285.2 )
(BLAST)
001: MALSMRKAIG VVKDQTSIGI AKVASNMAPD LEVAIVKATS HDDDQSSDKY IREILSLTSL SRGYVHACVT SVSRRLKKTR DWIVALKALM LVHRLLNEGD
101: PLFQEEILYA TRRGTRILNM SDFRDEAHSS SWDHSAFVRT YASYLDQRLE LALFERRGRN GGGSSSSHQS NGDDGYNRSR DDFRSPPPRT YDYETGNGFG
201: MPKRSRSFGD VNEIGAREEK KSVTPLREMT PERIFGKMGH LQRLLDRFLS CRPTGLAKNS RMILIAMYPV VKESFRLYAD ICEVLAVLLD KFFDMEYTDC
301: VKAFDAYASA AKQIDELIAF YHWCKDTGVA RSSEYPEVQR ITSKLLETLE EFVRDRAKRA KSPERKEIEA PPAPAPPVEE PVDMNEIKAL PPPENHTPPP
401: PPAPEPKPQQ PQVTDDLVNL REDDVSGDDQ GNKFALALFA GPPANNGKWE AFSSDNNVTS AWQNPAAELG KADWELALVE TASNLEHQKA AMGGGLDPLL
501: LNGMYDQGAV RQHVSTSELT GGSSSSVALP LPGKVNSHIL ALPAPDGTVQ KVNQDPFAAS LTIPPPSYVQ MAEMDKKQYL LTQEQQLWQQ YQQEGMRGQA
601: SLAKMNTAQT AMPYGMPPVN GMGPSPMGYY YNNPY
Arabidopsis Description
Probable clathrin assembly protein At4g32285 [Source:UniProtKB/Swiss-Prot;Acc:Q8S9J8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.