Factsheet for Os03t0275500-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92480	Sorghum	cytosol, mitochondrion, plastid	93.86	94.73
TraesCS4D01G208100.1	Wheat	cytosol, mitochondrion, plastid	80.95	94.11
Zm00001d028620_P001	Maize	plasma membrane	92.17	93.9
TraesCS4B01G207200.1	Wheat	cytosol, mitochondrion, plastid	91.4	93.26
TraesCS4A01G097200.1	Wheat	cytosol, mitochondrion, plastid	91.09	92.95
Zm00001d047804_P001	Maize	plasma membrane	90.48	92.9
HORVU4Hr1G059660.3	Barley	cytosol, mitochondrion, plastid	89.86	90.56
Zm00001d030399_P001	Maize	cytosol	47.93	89.14
Zm00001d046121_P001	Maize	cytosol	49.31	88.43
GSMUA_Achr9P03950_001	Banana	cytosol, mitochondrion, plastid	57.76	71.35
CDX76976	Canola	cytosol	64.52	70.83
CDY35361	Canola	cytosol	63.9	70.39
CDY11530	Canola	cytosol	61.29	68.79
CDX75232	Canola	cytosol	61.44	67.45
KRH52429	Soybean	endoplasmic reticulum	66.36	67.39
CDX68831	Canola	cytosol	61.14	67.34
Bra007800.1-P	Field mustard	cytosol	63.29	67.21
KRH61760	Soybean	mitochondrion	66.51	66.41
PGSC0003DMT400035762	Potato	cytosol	65.13	66.35
Solyc08g059660.1.1	Tomato	cytosol	64.67	66.19
Bra034252.1-P	Field mustard	cytosol	65.9	66.1
VIT_04s0008g05540.t01	Wine grape	cytosol	67.13	65.91
CDX76977	Canola	cytosol	52.84	65.9
PGSC0003DMT400040963	Potato	cytosol	64.67	65.68
AT2G25430.1	Thale cress	cytosol	65.59	65.39
Bra011333.1-P	Field mustard	cytosol	62.67	65.07
Solyc06g011450.1.1	Tomato	cytosol	60.83	64.5
CDX76760	Canola	cytosol	46.24	64.45
VIT_11s0016g05480.t01	Wine grape	cytosol	61.6	63.35
AT4G32285.2	Thale cress	cytosol	61.75	63.31
GSMUA_Achr11P...	Banana	cytosol	44.24	63.16
PGSC0003DMT400079380	Potato	cytosol, mitochondrion, plastid	58.06	61.36
Solyc07g008060.1.1	Tomato	cytosol	56.99	60.42
GSMUA_Achr6P33420_001	Banana	cytosol, mitochondrion, plastid	57.45	59.18
Os05t0112101-01	Rice	plasma membrane	52.53	58.86
KRH20132	Soybean	cytosol	54.99	58.5
KRH05593	Soybean	cytosol	6.61	50.0
Os05t0426100-00	Rice	cytosol	41.78	40.84
Os01t0881100-01	Rice	mitochondrion	31.8	39.73
Os06t0661400-01	Rice	cytosol	13.98	36.4
Os05t0549000-01	Rice	plasma membrane	29.19	33.51
Os01t0694900-01	Rice	cytosol	28.42	32.57
Os06t0175500-01	Rice	plasma membrane	28.11	32.11
Os02t0175700-01	Rice	plasma membrane	27.34	30.53
Os06t0699800-00	Rice	cytosol	20.43	30.3
Os02t0803300-01	Rice	cytosol	26.42	30.23
Os08t0467300-01	Rice	mitochondrion	15.36	25.25
Os11t0244600-01	Rice	cytosol	13.06	21.52

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.4.6	EntrezGene:4332409	ProteinID:ABF95253.1	EMBL:AK065232
InterPro:ANTH_dom	ProteinID:BAF11622.1	ProteinID:BAS83505.1	InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987
GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942	InterPro:IPR013809
InterPro:IPR014712	EnsemblPlantsGene:Os03g0275500	EnsemblPlants:Os03t0275500-01	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951
PANTHER:PTHR22951:SF13	UniProt:Q10NB4	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI0000DB4D13
RefSeq:XP_015630732.1	SEG:seg	:	:	:	:

Description

Epsin-like, N-terminal domain containing protein. (Os03t0275500-01);Similar to predicted protein. (Os03t0275500-02)

Coordinates

chr3:-:9313824..9316626

Molecular Weight (calculated)

72043.5 Da

IEP (calculated)

5.352

GRAVY (calculated)

-0.653

Length

651 amino acids

Sequence
(BLAST)

001: MSSSTIRKAL GAVKDQTSIG LAKVTSNIAP ELDVLIVKAT SHDDEPAEER HIREILHLTS GSRAHVAAAV AGCSRRLSRT RDYVVALKSL MLVHRLLADG
101: DPSFHRELLH ATRRGTRLLN LSDFRDEAHS GSWDHSAFVR TYALYLDQRL EFFLHERKQG SGSNASSSAN GPSPRDRWGS PDPYGRRSPS YSSPPGNGNG
201: YGYGGYDDYR ERNGNNNTDD KKPPTPVRDM KPERVLARMH HLQQLLDRFL ACRPTGGAKH SRMVLVALYQ IVRESFQLYA DICEVLAVLL DRFFDMEYAE
301: CVKAFEAYAS AAKQIDELCA FYGWCKETGV ARSSEYPEVQ RVTDKLLETL EEFMRDRAKR PKSPPREPEP EPVKEEEPEP DMNEIKALPA PEDYKEPEPE
401: KVEEEVKPEP PPQPQGDLVD LREETVTADE QGNRLALALF QGPPAAGGSN GSWEAFPSNG GNEVTSAWQN PAAEPGKADW ELALVETASN LSKQKATMTG
501: GMDPLLLNGM YDQGAVRQHV NAQVTTGSAS SVALPPAGQK TQVLALPAPD GSMQNVGGDP FAASLSFPPP SYVQMAEMEK KQQFLTQEQM MWQQYQRDGM
601: QGQSSLAKLD RAYNNGFAPN PAMPYGMPAA YNTNPMPMAY TANTGYYYPT Y

Best Arabidopsis Sequence Match ( AT2G25430.1 )
(BLAST)

001: MAPSIRKAIG AVKDQTSIGI AKVASNMAPD LEVAIVKATS HDDDPASEKY IREILNLTSL SRGYILACVT SVSRRLSKTR DWVVALKALM LVHRLLNEGD
101: PIFQEEILYS TRRGTRMLNM SDFRDEAHSS SWDHSAFVRT YAGYLDQRLE LALFERKSGV SVNSGGNSSH HSNNDDRYGR GRDDFRSPPP RSYDYENGGG
201: GGSDFRGDNN GYGGVPKRSR SYGDMTEMGG GGGGGGRDEK KVVTPLREMT PERIFGKMGH LQRLLDRFLS LRPTGLAKNS RMILIALYPV VRESFKLYAD
301: ICEVLAVLLD KFFDMEYSDC VKAFDAYASA AKQIDELIAF YNWCKETGVA RSSEYPEVQR ITSKLLETLE EFVRDRAKRG KSPERKEIEA PPPVVEEEEP
401: EPDMNEIKAL PPPENYTPPP PPEPEPQPEK PQFTEDLVNL REDEVTADDQ GNKFALALFA GPPGNNGKWE AFSSNGVTSA WQNPAAEPGK ADWELALVET
501: TSNLEKQTAA LGGGFDNLLL NGMYDQGMVR QHVSTSQLTG GSASSVALPL PGKTNNQVLA LPAPDGTVEK VNQDPFAASL TIPPPSYVQM AEMEKKQYLL
601: SQEQQLWQQY QRDGMRGQAS LAKMNTGPVP AYGMPPVNGM GPPPTGYYYN NPY

Arabidopsis Description

Putative clathrin assembly protein At2g25430 [Source:UniProtKB/Swiss-Prot;Acc:Q8LF20]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.