Factsheet for Os06t0661400-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
plastid 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g017440.1.1	Tomato	cytosol	64.0	53.51
CDY42239	Canola	cytosol	66.0	48.96
HORVU7Hr1G109970.5	Barley	cytosol	87.6	38.29
Zm00001d036672_P005	Maize	cytosol	87.6	38.09
KXG20534	Sorghum	cytosol, mitochondrion	88.0	37.93
TraesCS7B01G393800.2	Wheat	cytosol	86.0	37.72
TraesCS7D01G476900.2	Wheat	cytosol	86.8	37.48
TraesCS7A01G490500.2	Wheat	cytosol	86.0	37.46
Os06t0699800-00	Rice	cytosol	64.0	36.45
CDY47927	Canola	cytosol	67.6	33.47
GSMUA_Achr7P04960_001	Banana	cytosol	73.6	33.45
GSMUA_Achr1P15690_001	Banana	cytosol	72.4	32.38
Os02t0175700-01	Rice	plasma membrane	74.4	31.9
Os05t0549000-01	Rice	plasma membrane	71.2	31.39
VIT_11s0103g00620.t01	Wine grape	cytosol	74.0	31.3
GSMUA_Achr4P20660_001	Banana	cytosol	69.2	31.06
Os01t0694900-01	Rice	cytosol	69.6	30.63
KRH02791	Soybean	cytosol	70.0	30.49
KRH19094	Soybean	cytosol	69.2	30.14
KRH37330	Soybean	cytosol	71.2	29.87
PGSC0003DMT400036570	Potato	cytosol	68.4	29.84
CDY52732	Canola	cytosol	69.6	29.74
KRH12315	Soybean	cytosol	70.8	29.7
Solyc02g043810.2.1	Tomato	cytosol	68.4	29.58
CDY38276	Canola	cytosol	69.6	29.39
AT5G57200.1	Thale cress	cytosol	69.2	29.27
Bra002750.1-P	Field mustard	cytosol	69.2	29.17
Bra020460.1-P	Field mustard	cytosol	68.0	28.62
AT4G25940.1	Thale cress	cytosol	66.0	27.45
CDX94400	Canola	cytosol	65.2	27.35
CDX89382	Canola	cytosol	65.6	27.29
Bra013934.1-P	Field mustard	cytosol	65.6	27.29
Os06t0175500-01	Rice	plasma membrane	59.2	25.96
Os02t0803300-01	Rice	cytosol	54.8	24.08
Os01t0881100-01	Rice	mitochondrion	34.0	16.31
Os05t0426100-00	Rice	cytosol	40.4	15.17
Os08t0467300-01	Rice	mitochondrion	23.2	14.65
Os03t0275500-01	Rice	plasma membrane	36.4	13.98
Os11t0244600-01	Rice	cytosol	22.0	13.92
Os05t0112101-01	Rice	plasma membrane	31.2	13.43
PGSC0003DMT400025029	Potato	nucleus	4.8	4.23
Solyc12g017430.1.1	Tomato	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	UniProt:A0A0P0WZI5	InterPro:ANTH_dom	ProteinID:BAS98982.1
InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276
GO:GO:0048268	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	EnsemblPlantsGene:Os06g0661400	EnsemblPlants:Os06t0661400-01
PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF21	SMART:SM00273	SUPFAM:SSF48464
SUPFAM:SSF89009	UniParc:UPI0000E128F2	SEG:seg	:	:	:

Description

OsSTA175Similar to clathrin assembly protein. (Os06t0661400-01)

Coordinates

chr6:+:27257416..27261248

Molecular Weight (calculated)

28474.6 Da

IEP (calculated)

9.422

GRAVY (calculated)

-0.153

Length

250 amino acids

Sequence
(BLAST)

001: MGPGTWRKAY GALKDSTKVG LANFNSEYKD LDIAIVKATN HVECPPKERY LRKILFATSA NRPRSDVGYS ICTLARRLSK TKNWIVALKT LIVIHRLLRE
101: GDGTFKEDFL NYSYRGTILQ IPQFKDDSSP LAWDCSVWVR TYASYLDERV ECFRILKYDV EADRLVKLPQ ASGKAHSRTR TLPCGDLLDH LPALQRLLLR
201: LISCQPEGAA CTNYLVQYAL ALVLKESFKI YCSINDGIIN LVDVFRYAKI

Best Arabidopsis Sequence Match ( AT1G14910.1 )
(BLAST)

001: MGTLQSWRRA YGALKDTTKV GLVRVNSDYA ELDVAIVKAT NHVECPPKDR HLRKIFLATS AIRPRADVAY CIHALSRRLH KTRNWTVALK ALLVIHRLLR
101: DGDPTFREEL LNFSQKGRIM QISNFKDDSS PVAWDCSGWV RTYALFLEER LECFRVLKYD IEAERLPKVS PGQEKGYSKT RDLDGEKLLE QLPALQQLLH
201: RLIGCKPEGA AKHNHIIQYA LSLVLKESFK VYCAINEGII NLVEKFFEMP RHEAIKALEI YKRAGLQAGN LSAFYEVCKG LELARNFQFP VLREPPQSFL
301: TTMEEYMRDA PQMVDVTSGP LLLTYTPDDG LTSEDVGPSH EEHETSSPSD SAVVPSEETQ LSSQSPPSVE TPQNFIDTDD LLGLHDDTPD PLAILDQNAL
401: ALALVSNDVD SSPFSFGQAR DLDPSGWELA LVTTPSNDIS AATERQLAGG LDTLTLNSLY DDGALRAAQQ PAYGVPASNP FEVQDLFAFS DSVSPPSAVN
501: NPFGLYEPTY HQQEQQPQLQ VAPSPANPFG DFGEFPIVPV SEPQSTTSFG AFPVPVSEPS NTTGFGEIPV VPVTEPPNTT AFGEFPVVPV SEPQNITGFG
601: ALPVTPASEP SNTTGFGEFP VVSVSAPQNT TGFGALPVIP VSEPSKTTGL GEFPVVPVSE PQNTTGFGEF PVNAGAHEQH NSNNPFGSTG FL

Arabidopsis Description

Putative clathrin assembly protein At1g14910 [Source:UniProtKB/Swiss-Prot;Acc:P94017]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.