CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19094	Soybean	cytosol	93.55	93.55
KRH12315	Soybean	cytosol	77.53	74.66
KRH37330	Soybean	cytosol	76.31	73.49
CDY42239	Canola	cytosol	42.33	72.11
Os06t0661400-01	Rice	cytosol	30.49	70.0
VIT_11s0103g00620.t01	Wine grape	cytosol	66.55	64.64
GSMUA_Achr7P04960_001	Banana	cytosol	60.63	63.27
CDY52732	Canola	cytosol	63.76	62.56
CDY38276	Canola	cytosol	64.46	62.5
GSMUA_Achr1P15690_001	Banana	cytosol	60.63	62.25
Bra002750.1-P	Field mustard	cytosol	64.11	62.06
Solyc02g043810.2.1	Tomato	cytosol	62.37	61.94
PGSC0003DMT400036570	Potato	cytosol	61.67	61.78
GSMUA_Achr4P20660_001	Banana	cytosol	59.76	61.58
AT5G57200.1	Thale cress	cytosol	63.24	61.42
Bra020460.1-P	Field mustard	cytosol	63.41	61.28
CDY47927	Canola	cytosol	53.31	60.59
AT4G25940.1	Thale cress	cytosol	63.41	60.57
Bra013934.1-P	Field mustard	cytosol	63.24	60.4
CDX94400	Canola	cytosol	62.54	60.23
CDX89382	Canola	cytosol	63.07	60.23
Zm00001d036672_P005	Maize	cytosol	59.23	59.13
KXG20534	Sorghum	cytosol, mitochondrion	59.58	58.97
EES06356	Sorghum	cytosol	58.54	58.95
GSMUA_Achr3P05590_001	Banana	cytosol	55.92	58.79
Zm00001d015430_P001	Maize	cytosol	58.36	58.06
HORVU7Hr1G109970.5	Barley	cytosol	56.79	56.99
Os02t0175700-01	Rice	plasma membrane	57.84	56.95
KXG20765	Sorghum	mitochondrion	56.1	56.69
KRH58627	Soybean	nucleus	56.1	56.59
KRH42533	Soybean	cytosol	55.92	56.51
TraesCS6B01G181800.1	Wheat	cytosol	56.62	56.33
TraesCS7D01G476900.2	Wheat	cytosol	56.79	56.3
TraesCS7A01G490500.2	Wheat	cytosol	56.27	56.27
TraesCS7B01G393800.2	Wheat	cytosol	55.75	56.14
KRH38239	Soybean	cytosol	53.48	55.42
TraesCS6D01G143700.1	Wheat	cytosol	56.62	55.37
TraesCS6A01G154100.1	Wheat	cytosol	55.75	54.61
Os06t0699800-00	Rice	cytosol	41.12	53.76
TraesCS7B01G322300.1	Wheat	mitochondrion	51.92	52.74
TraesCS7D01G414100.1	Wheat	mitochondrion	51.92	52.46
TraesCS7A01G421900.1	Wheat	mitochondrion	51.92	52.28
HORVU6Hr1G030980.1	Barley	cytosol	56.27	52.18
HORVU7Hr1G097510.7	Barley	mitochondrion	45.3	50.88
KRH20163	Soybean	cytosol	47.91	50.37
KRH03643	Soybean	mitochondrion	48.08	50.37
TraesCS7B01G430700.2	Wheat	cytosol	12.37	49.65
KRH54979	Soybean	cytosol	31.53	35.77
KRH05593	Soybean	cytosol	5.23	34.88
KRH43936	Soybean	cytosol, mitochondrion	30.31	29.34
KRH10492	Soybean	cytosol, mitochondrion	30.14	29.03
KRH58332	Soybean	mitochondrion	28.75	28.21
KRH52429	Soybean	endoplasmic reticulum	31.36	28.08
KRH61760	Soybean	mitochondrion	31.18	27.45
KRH41749	Soybean	cytosol	13.41	27.21
KRH20132	Soybean	cytosol	28.92	27.12
KRH09259	Soybean	cytosol, nucleus, peroxisome	18.29	24.42
KRH38757	Soybean	cytosol, nucleus, peroxisome	18.12	23.96
KRH60451	Soybean	mitochondrion	18.29	23.7
KRH42490	Soybean	cytosol	16.38	23.27
KRH58584	Soybean	mitochondrion	16.03	23.06
KRG89239	Soybean	cytosol, mitochondrion	14.11	21.09
KRH49763	Soybean	mitochondrion	13.76	20.31
KRH17907	Soybean	cytosol	21.78	17.12

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	EntrezGene:100818165	MapMan:22.1.6.2	EMBL:ACUP02010324	InterPro:ANTH_dom
InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	EnsemblPlantsGene:GLYMA_17G059500	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136
GO:GO:0030276	GO:GO:0048268	UniProt:I1MSL6	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712
EnsemblPlants:KRH02791	ProteinID:KRH02791	ProteinID:KRH02791.1	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951
PANTHER:PTHR22951:SF56	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI000294A454	SEG:seg

Description

hypothetical protein

Coordinates

chr17:+:4509206..4514474

Molecular Weight (calculated)

65566.6 Da

IEP (calculated)

5.137

GRAVY (calculated)

-0.532

Length

574 amino acids

Sequence
(BLAST)

001: MGTFQTLRKA YGALKDSTTV GLAKVNSEYK ELDIAIVKAT SHVEYPPKER HVRKIFYATS AHQPRADVAY CIHTLAKRLS KTRNWIVAIK TLIVIHRILR
101: EGDPTFKDDL TAYVRRGRFL QISNFKDDSS ALAWDCSAWV RTYALFLEER LECFRILRYD IEAERLTKPS PTITQGHSRT RMLTSEGLLE QLPALQQLLY
201: RLIGCEPEGL ALRNHLIQYA LALILKESFK IYCALNDGII NLVDVFFDMP KYDAVKALRI YKRAGQQAEN LADFYEYCKR LDLARNFQFP TLRLPPASFL
301: ATMEEYIKEA PLTATKRLEY HENDQSPQSE AEPKESEEAE ASEQPDEEVN EEELVDKDET QPKEEEAELP PLISTDDLLG LNEINPKAQE LEESNALALA
401: IVPPGGHYSN NLALTNISGT SGWELALVTT PSNHTSQAPD RRMAGGFDKL LLDSLYEDEN ARRQLQLRNA GYGYEGMDTH NPFDHYNQQD PFAMSNNIAP
501: PANVQMAFMA QQQQQMMFQQ QQQYNTMMVP YQYPQTQYNQ QMPVMGSANP FSDPLSVPSY TYSSMHHQGN YHLM

Best Arabidopsis Sequence Match ( AT5G57200.1 )
(BLAST)

001: MGTFTSFRKA YGALKDTTTV GLAKVNSEFK DLDIAIVKAT NHVESPPKER HVRKIFSATS VIQPRADVAY CIHALSKRLS KTRNWVVAMK VLIVIHRTLR
101: EGDPTFREEL LNYSHRRHIL RISNFKDDTS PLAWDCSAWV RTYALFLEER LECYRVLKYD IEAERLPKAS GAASKTHRTR MLSGEDLLEQ LPALQQLLYR
201: LIGCQPEGAA YSNYLIQYAL ALVLKESFKI YCAINDGIIN LVDMFFEMSR HDAVKALNIY KRAGQQAENL AEFYDYCKGL ELARNFQFPT LRQPPPSFLA
301: TMEEYIKEAP QSGSVQKKLE YQEKEEEEQE QEEEQPEEPA EEENQNENTE NDQPLIEEEE EEPKEEIEVE EAKPSPLIDT DDLLGLHEIN PKAAEIEQNN
401: AFSLAIYPPG HETSAPSNSL SLIEAGGSGW ELALVTPQNN NNNNNNPRPV IATKLGGGFD NLLLDSLYED DTARRQIQLT NAGYGFGATA IPGALASSNP
501: NPFGVQQDPF AMSNNMAPPT NVQMAMQQQQ MMMMNNQSPY NNNYSPYHHH QFSPNPSTSS SPNPFGDPFL ALPAPPSSTT QQQYSPNHML L

Arabidopsis Description

Putative clathrin assembly protein At5g57200 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.