CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0037g01000.t01	Wine grape	cytosol	39.53	39.22
KRH03643	Soybean	mitochondrion	38.93	35.95
KRH20163	Soybean	cytosol	38.74	35.9
GSMUA_Achr4P05920_001	Banana	cytosol	38.54	35.58
KRH42533	Soybean	cytosol	35.77	31.87
KRH58627	Soybean	nucleus	35.77	31.81
KRH02791	Soybean	cytosol	35.77	31.53
KRH38239	Soybean	cytosol	34.19	31.23
KRH19094	Soybean	cytosol	35.18	31.01
KRH12315	Soybean	cytosol	36.36	30.87
PGSC0003DMT400020390	Potato	cytosol	36.17	30.81
Solyc12g010530.1.1	Tomato	cytosol	35.97	30.64
KRH37330	Soybean	cytosol	35.97	30.54
KRH05593	Soybean	cytosol	4.55	26.74
KRH43936	Soybean	cytosol, mitochondrion	23.72	20.24
KRH60451	Soybean	mitochondrion	17.39	19.86
KRH10492	Soybean	cytosol, mitochondrion	23.32	19.8
KRH41749	Soybean	cytosol	10.87	19.43
KRH42490	Soybean	cytosol	15.22	19.06
KRH38757	Soybean	cytosol, nucleus, peroxisome	16.21	18.89
KRH58584	Soybean	mitochondrion	14.82	18.8
KRH09259	Soybean	cytosol, nucleus, peroxisome	15.61	18.37
KRH58332	Soybean	mitochondrion	20.95	18.12
KRH61760	Soybean	mitochondrion	22.33	17.33
KRH52429	Soybean	endoplasmic reticulum	21.94	17.32
KRH49763	Soybean	mitochondrion	13.24	17.22
KRG89239	Soybean	cytosol, mitochondrion	12.45	16.41
KRH20132	Soybean	cytosol	19.57	16.18
KRH17907	Soybean	cytosol	17.79	12.33

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	EMBL:ACUP02003671	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2
InterPro:ENTH	InterPro:ENTH_VHS	EnsemblPlantsGene:GLYMA_06G223100	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276
GO:GO:0048268	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	UniProt:K7KWL8	EnsemblPlants:KRH54979
ProteinID:KRH54979	ProteinID:KRH54979.1	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF32
SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI000294DF52	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:29407162..29420922

Molecular Weight (calculated)

57366.3 Da

IEP (calculated)

4.786

GRAVY (calculated)

-0.357

Length

506 amino acids

Sequence
(BLAST)

001: MKKAFRLTKV SGDHKGLDAA IVKATGYEHL LPKEKHIRTI FQSLSPSKPR SEVVYCIHGL TTRFSQTNNW AVAMKTLIII HRAIRELDTS ILEELVNYSQ
101: VKGCMIDLSY FHDKSIPNDY SIWIRNYALY LEERLQCFTV MNYDVATNTS KYSQKLDTQD LLEQLPVLQN LLSRLLDCKP RSTTGCNRLI QFVLSLVASE
201: SVKLYVAITI RVVELLDKFF EMHHNDACSS LQIYQKSMSQ AERLTEFFET CKGLEFGKGQ KFINIKMPPA SFIITMEEYI KEAPSSLMLE YNMDVDREED
301: TTTKNVGSAD LLTLDNDVVD KSTDPHVEDG MAIPPPQAAE LMGLFDLLTG ASEFDEKSLT TTIVPIEKNS KDDENRTSPI TGWEVALFSD SERYDENVIA
401: EIKSKETSQM EVSKLDSLYD EVIVNTQQSV TNNATQVTSN PFDYEASHND QFSMVMAPSA LQNELCALPH MQSPISAQMV GTPQQHLLQQ QNEPYTMNKK
501: STNPFD

Best Arabidopsis Sequence Match ( AT1G14910.1 )
(BLAST)

001: MGTLQSWRRA YGALKDTTKV GLVRVNSDYA ELDVAIVKAT NHVECPPKDR HLRKIFLATS AIRPRADVAY CIHALSRRLH KTRNWTVALK ALLVIHRLLR
101: DGDPTFREEL LNFSQKGRIM QISNFKDDSS PVAWDCSGWV RTYALFLEER LECFRVLKYD IEAERLPKVS PGQEKGYSKT RDLDGEKLLE QLPALQQLLH
201: RLIGCKPEGA AKHNHIIQYA LSLVLKESFK VYCAINEGII NLVEKFFEMP RHEAIKALEI YKRAGLQAGN LSAFYEVCKG LELARNFQFP VLREPPQSFL
301: TTMEEYMRDA PQMVDVTSGP LLLTYTPDDG LTSEDVGPSH EEHETSSPSD SAVVPSEETQ LSSQSPPSVE TPQNFIDTDD LLGLHDDTPD PLAILDQNAL
401: ALALVSNDVD SSPFSFGQAR DLDPSGWELA LVTTPSNDIS AATERQLAGG LDTLTLNSLY DDGALRAAQQ PAYGVPASNP FEVQDLFAFS DSVSPPSAVN
501: NPFGLYEPTY HQQEQQPQLQ VAPSPANPFG DFGEFPIVPV SEPQSTTSFG AFPVPVSEPS NTTGFGEIPV VPVTEPPNTT AFGEFPVVPV SEPQNITGFG
601: ALPVTPASEP SNTTGFGEFP VVSVSAPQNT TGFGALPVIP VSEPSKTTGL GEFPVVPVSE PQNTTGFGEF PVNAGAHEQH NSNNPFGSTG FL

Arabidopsis Description

Putative clathrin assembly protein At1g14910 [Source:UniProtKB/Swiss-Prot;Acc:P94017]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.