CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38757	Soybean	cytosol, nucleus, peroxisome	93.26	92.4
VIT_18s0089g01330.t01	Wine grape	cytosol	56.51	60.45
AT1G33340.1	Thale cress	cytosol, mitochondrion, nucleus	47.44	54.55
Bra028000.1-P	Field mustard	mitochondrion	46.05	53.37
CDY50184	Canola	mitochondrion	45.58	53.26
CDX93766	Canola	mitochondrion	45.58	52.83
KRH05593	Soybean	cytosol	6.51	32.56
HORVU4Hr1G015050.1	Barley	mitochondrion	24.42	26.58
TraesCS4B01G088300.1	Wheat	mitochondrion	24.19	26.33
TraesCS4D01G085400.1	Wheat	mitochondrion	23.95	26.08
TraesCS4A01G227800.1	Wheat	mitochondrion	23.26	25.32
Zm00001d007272_P001	Maize	mitochondrion	23.02	25.06
Zm00001d049002_P001	Maize	mitochondrion	23.49	24.94
EES08262	Sorghum	mitochondrion, plastid	24.65	24.26
Os11t0244600-01	Rice	cytosol	22.09	24.05
KRH58584	Soybean	mitochondrion	19.3	20.8
KRH42490	Soybean	cytosol	19.3	20.54
KRH60451	Soybean	mitochondrion	20.47	19.86
KRH41749	Soybean	cytosol	13.02	19.79
KRG89239	Soybean	cytosol, mitochondrion	17.44	19.53
KRH38239	Soybean	cytosol	24.42	18.95
KRH02791	Soybean	cytosol	24.42	18.29
KRH49763	Soybean	mitochondrion	16.51	18.25
KRH42533	Soybean	cytosol	23.95	18.13
KRH19094	Soybean	cytosol	24.19	18.12
KRH58627	Soybean	nucleus	23.72	17.93
KRH20163	Soybean	cytosol	22.56	17.77
KRH03643	Soybean	mitochondrion	22.33	17.52
KRH37330	Soybean	cytosol	23.49	16.95
KRH43936	Soybean	cytosol, mitochondrion	23.26	16.86
KRH52429	Soybean	endoplasmic reticulum	25.12	16.85
KRH12315	Soybean	cytosol	23.26	16.78
KRH58332	Soybean	mitochondrion	22.79	16.75
KRH10492	Soybean	cytosol, mitochondrion	23.02	16.61
KRH61760	Soybean	mitochondrion	24.88	16.41
KRH20132	Soybean	cytosol	22.56	15.85
KRH54979	Soybean	cytosol	18.37	15.61
KRH17907	Soybean	cytosol	20.7	12.19

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	EntrezGene:100808531	MapMan:35.1	EMBL:ACUP02010275	InterPro:ANTH_dom
InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	EnsemblPlantsGene:GLYMA_16G206900	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136
GO:GO:0030276	GO:GO:0048268	UniProt:I1MQA9	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712
EnsemblPlants:KRH09259	ProteinID:KRH09259	ProteinID:KRH09259.1	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951
PANTHER:PTHR22951:SF14	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI000233EF05	SEG:seg

Description

hypothetical protein

Coordinates

chr16:-:36686943..36688802

Molecular Weight (calculated)

47919.6 Da

IEP (calculated)

6.950

GRAVY (calculated)

-0.176

Length

430 amino acids

Sequence
(BLAST)

001: MGVDIQGKLR LALGSVKDHA SIGKAMMYHY QHDGFSNIEI AVLRATGHDN GTIDDRYMHE ILFLVSNTPG SIPFLAERIS RRLSKTKDHA VALKTLVLIH
101: RLLRGGNRSF EQELCKAHVS GHLQISTRCF TKSSDHPSVG FLHKYAAYLE ERMSWLINQA GKLEPVMSKG LEFRRYDEKS IDMAFRTLPK CQVLIDKVLE
201: CSPHDILCSD HSLAQAAMSN TLRESFQVYM TFSEGIAALV NMFFDLTASA RGLACEILKK ASLQSQKLHD LYESCKQVVE NKNLDYPSVQ IISMNHVVAL
301: EQLGSPQNEL AASLVSLSSI SRPPPISGHF TKSREIELAV EAKESKRSEE NIDIDLSPTP TLLSWTLETK ISMVWVVFED EVPNESQVLP APQKLGGADA
401: VCDIKSEYGR PSVFLNPFSS SFQTSMSTKV

Best Arabidopsis Sequence Match ( AT1G33340.1 )
(BLAST)

001: MRLDLSAKFR QVLGLAKDHA SIGRAIVQNY NEKAFFDIEV AVVRATSHDD CPVDDKTMHE ILFLVSNTPG SIPFLAEQIS RRLAKTRDCL VAGKTLLLFH
101: RLLRGSSRSI EQQLHIAHTS GHLQIGCSWF MMSLDSRSFV FLQNYVAYLQ ERVGWIINQA GKLEPVMSGG TKFSRYKEKS MDLVFHILPK CQEFIAQVLK
201: CSPVDAWPID NLVQAATGNI LKESFQVYMT YSDGMTALVS MLFDLSRPAR DLACGMLRKA SQQIQDLRIL YDKCRGFAGM KSLDYPSVQA ISMDHIVALE
301: ECSSYGGKRG FSLSTNLRDA ITCNELKQEQ HSASFSSTSP FSLPVETKIS MVWVVFDNED GEESDKQTEK AYER

Arabidopsis Description

Putative clathrin assembly protein At1g33340 [Source:UniProtKB/Swiss-Prot;Acc:Q9C502]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.