Factsheet for Zm00001d049002_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007272_P001	Maize	mitochondrion	80.99	83.04
TraesCS4B01G088300.1	Wheat	mitochondrion	66.91	68.61
HORVU4Hr1G015050.1	Barley	mitochondrion	66.67	68.35
TraesCS4D01G085400.1	Wheat	mitochondrion	66.67	68.35
TraesCS4A01G227800.1	Wheat	mitochondrion	66.42	68.1
Os11t0244600-01	Rice	cytosol	61.23	62.78
VIT_18s0089g01330.t01	Wine grape	cytosol	25.43	25.62
CDX93766	Canola	mitochondrion	22.72	24.8
Bra028000.1-P	Field mustard	mitochondrion	22.47	24.53
CDY50184	Canola	mitochondrion	22.22	24.46
KRH09259	Soybean	cytosol, nucleus, peroxisome	24.94	23.49
KRH38757	Soybean	cytosol, nucleus, peroxisome	24.94	23.27
AT1G33340.1	Thale cress	cytosol, mitochondrion, nucleus	21.48	23.26
Zm00001d046121_P001	Maize	cytosol	17.53	19.56
Solyc01g005170.1.1	Tomato	cytosol, mitochondrion, plastid	18.52	18.12
Zm00001d030399_P001	Maize	cytosol	15.31	17.71
PGSC0003DMT400092428	Potato	cytosol, mitochondrion, nucleus	18.77	17.27
Zm00001d049990_P001	Maize	mitochondrion	15.8	16.49
Zm00001d047804_P001	Maize	plasma membrane	23.46	14.98
Zm00001d036672_P005	Maize	cytosol	21.23	14.96
Zm00001d012220_P001	Maize	cytosol, mitochondrion, nucleus, plastid	20.0	14.59
Zm00001d028620_P001	Maize	plasma membrane	22.96	14.55
Zm00001d005869_P001	Maize	mitochondrion	14.07	14.32
Zm00001d015430_P001	Maize	cytosol	20.25	14.21
Zm00001d038892_P001	Maize	mitochondrion	19.01	13.68
Zm00001d031760_P001	Maize	mitochondrion	16.54	13.62
Zm00001d035652_P001	Maize	cytosol	20.0	13.57
Zm00001d010228_P001	Maize	cytosol	19.51	12.85
Zm00001d047867_P001	Maize	cytosol	10.37	12.77
Zm00001d037484_P002	Maize	cytosol, mitochondrion	17.28	12.7
Zm00001d043773_P003	Maize	cytosol	19.26	12.44
Zm00001d009452_P007	Maize	cytosol, mitochondrion, plastid	17.28	12.03
Zm00001d045154_P002	Maize	mitochondrion	17.04	11.54
Zm00001d052008_P003	Maize	cytosol	15.56	11.39

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	EntrezGene:103652838	MapMan:35.1	InterPro:ANTH_dom	ProteinID:AQK49350.1
InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276
GO:GO:0048268	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	UniProt:K7UQ10	PFAM:PF07651
PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF14	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI000221106A
EnsemblPlantsGene:Zm00001d049002	EnsemblPlants:Zm00001d049002_P001	EnsemblPlants:Zm00001d049002_T001	SEG:seg	:	:

Description

Putative clathrin assembly protein

Coordinates

chr4:-:12248809..12250026

Molecular Weight (calculated)

43355.6 Da

IEP (calculated)

6.513

GRAVY (calculated)

-0.064

Length

405 amino acids

Sequence
(BLAST)

001: MKVFKGKIWA AIGSLMDPAG TASTTKSSSA AAVPDRALLT DIEAAIERCT GSSGGVNDDR HVHEILFLVS NAPGAITFLS RRITARLENA RAPAAALRSL
101: LLVHRLLRAG DRYFEQDFRG LWASRELRVD APCSPLTAGT GAAVASGACA FVHGYSAYLE ERMQWVINQA GNLEPARMTP QTDHGAGKPP HFSSSSSSSS
201: SSSHDASAET LLSKLAMCQS LLDLAIQLLP DNNTSASAAV RSAFGIVLRE SFKVYVAFAE GVDVMLLLSR SLAGLSKPSR VTAHEILKKA CAQTPELKEF
301: YLKCKRSNAS STSLEYPLVR VVTPAQAFAL EMMEPVTMIP IPEQDGYPEE VEAKPEAEAI DSGASPFAHK METTISTVWV QFDDEDQKLM TTAAAGHSLK
401: AVQPS

Best Arabidopsis Sequence Match ( AT1G33340.1 )
(BLAST)

001: MRLDLSAKFR QVLGLAKDHA SIGRAIVQNY NEKAFFDIEV AVVRATSHDD CPVDDKTMHE ILFLVSNTPG SIPFLAEQIS RRLAKTRDCL VAGKTLLLFH
101: RLLRGSSRSI EQQLHIAHTS GHLQIGCSWF MMSLDSRSFV FLQNYVAYLQ ERVGWIINQA GKLEPVMSGG TKFSRYKEKS MDLVFHILPK CQEFIAQVLK
201: CSPVDAWPID NLVQAATGNI LKESFQVYMT YSDGMTALVS MLFDLSRPAR DLACGMLRKA SQQIQDLRIL YDKCRGFAGM KSLDYPSVQA ISMDHIVALE
301: ECSSYGGKRG FSLSTNLRDA ITCNELKQEQ HSASFSSTSP FSLPVETKIS MVWVVFDNED GEESDKQTEK AYER

Arabidopsis Description

Putative clathrin assembly protein At1g33340 [Source:UniProtKB/Swiss-Prot;Acc:Q9C502]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.