Factsheet for Zm00001d049990_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13983	Sorghum	mitochondrion	83.51	80.6
Os08t0467300-01	Rice	mitochondrion	77.58	76.01
Zm00001d031760_P001	Maize	mitochondrion	82.99	65.45
TraesCS5A01G297400.1	Wheat	mitochondrion	62.11	63.93
TraesCS5B01G296700.1	Wheat	mitochondrion	62.63	63.61
TraesCS5D01G304500.1	Wheat	mitochondrion	63.14	55.43
HORVU5Hr1G078270.1	Barley	cytosol	62.89	55.33
HORVU7Hr1G089710.1	Barley	mitochondrion	24.74	54.24
Zm00001d005869_P001	Maize	mitochondrion	52.84	51.51
GSMUA_Achr7P18620_001	Banana	mitochondrion	48.97	48.97
GSMUA_Achr8P22890_001	Banana	mitochondrion	49.48	48.36
GSMUA_Achr3P20230_001	Banana	mitochondrion	37.89	44.41
GSMUA_Achr7P02390_001	Banana	cytosol	47.42	44.23
CDY03862	Canola	mitochondrion	37.37	38.06
CDY64692	Canola	mitochondrion	37.11	37.99
Bra012491.1-P	Field mustard	mitochondrion	36.86	37.83
CDY57160	Canola	mitochondrion	36.6	37.57
VIT_01s0011g06370.t01	Wine grape	mitochondrion	36.86	37.14
Bra024772.1-P	Field mustard	mitochondrion	36.08	37.14
AT1G25240.2	Thale cress	mitochondrion	35.82	36.87
CDY60368	Canola	mitochondrion	35.82	36.77
CDY12691	Canola	mitochondrion	33.76	35.99
Bra033960.1-P	Field mustard	mitochondrion	33.76	35.99
CDX81471	Canola	mitochondrion	34.02	35.87
CDY01884	Canola	mitochondrion	31.7	34.45
AT1G68110.1	Thale cress	mitochondrion	33.25	34.04
PGSC0003DMT400058608	Potato	mitochondrion	35.05	34.0
Solyc01g005070.2.1	Tomato	mitochondrion	34.79	33.92
Bra004282.1-P	Field mustard	mitochondrion	31.44	33.8
KRH42490	Soybean	cytosol	35.05	33.66
CDX96047	Canola	mitochondrion	31.19	33.52
KRH58584	Soybean	mitochondrion	34.28	33.33
CDY45281	Canola	cytosol	29.38	33.24
AT1G14686.1	Thale cress	cytosol	28.87	33.04
CDY41097	Canola	cytosol	28.87	32.56
Bra026195.1-P	Field mustard	cytosol	29.38	32.02
AT2G01920.1	Thale cress	mitochondrion	25.52	31.73
PGSC0003DMT400075705	Potato	mitochondrion	31.44	31.12
Solyc04g008350.1.1	Tomato	mitochondrion	31.44	31.04
KRG89239	Soybean	cytosol, mitochondrion	30.41	30.73
KRH49763	Soybean	mitochondrion	29.38	29.31
Zm00001d046121_P001	Maize	cytosol	20.62	22.04
Zm00001d030399_P001	Maize	cytosol	16.75	18.57
Zm00001d037484_P002	Maize	cytosol, mitochondrion	23.71	16.7
Zm00001d038892_P001	Maize	mitochondrion	24.23	16.7
Zm00001d047804_P001	Maize	plasma membrane	26.8	16.4
Zm00001d028620_P001	Maize	plasma membrane	26.55	16.12
Zm00001d035652_P001	Maize	cytosol	24.74	16.08
Zm00001d007272_P001	Maize	mitochondrion	16.24	15.95
Zm00001d049002_P001	Maize	mitochondrion	16.49	15.8
Zm00001d009452_P007	Maize	cytosol, mitochondrion, plastid	22.94	15.29
Zm00001d045154_P002	Maize	mitochondrion	23.45	15.22
Zm00001d012220_P001	Maize	cytosol, mitochondrion, nucleus, plastid	20.88	14.59
Zm00001d015430_P001	Maize	cytosol	20.88	14.04
Zm00001d010228_P001	Maize	cytosol	22.16	13.98
Zm00001d043773_P003	Maize	cytosol	22.42	13.88
Zm00001d052008_P003	Maize	cytosol	19.59	13.74
Zm00001d036672_P005	Maize	cytosol	20.36	13.74
Zm00001d047867_P001	Maize	cytosol	9.28	10.94

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	EntrezGene:100284872	MapMan:35.1	InterPro:ANTH_dom	ProteinID:AQK51755.1
UniProt:B6TYB1	InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	EMBL:EU969976	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043
GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712
PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF19	SMART:SM00273	SUPFAM:SSF48464
SUPFAM:SSF89009	UniParc:UPI000182ED5D	EnsemblPlantsGene:Zm00001d049990	EnsemblPlants:Zm00001d049990_P001	EnsemblPlants:Zm00001d049990_T001	SEG:seg

Description

Clathrin assembly protein%3B Putative ENTH/ANTH/VHS superfamily protein

Coordinates

chr4:+:57683950..57685116

Molecular Weight (calculated)

43044.6 Da

IEP (calculated)

7.983

GRAVY (calculated)

-0.121

Length

388 amino acids

Sequence
(BLAST)

001: MTTARQWWRR ATAAVKDRRS LYLRRVAALR PRPASGVAAA VLWSPELEAA VIRATSHDER SVDYGNAARV FALARASPVS VQPLMWALAR RAGRTRCWAV
101: ALKALMLAHG LLLRPDLAPR SVRLGRIPFD LADFRDRSSP PSKSSGFSAF VRAYFRFLDT RSLFIAQDLD AVADTGETDG EDARLDHVTK QQHLLHLLLQ
201: IRPYGDGMEL GLIFEAMDCV VIEIFEVYSE ICTGIARFLV AVLGSAPMTP RPRPGETLAA ARRRRAVQGM RVLKNAAEQS AQLSSYFELC QSLGVLNAAE
301: FPAVERVADD DIRDLEKIIM NHVVEESRED KQMKALVAVE ETPPASKTVV TTEWVVFDDD DNAAAGARPR NFEGYLNPFV TAPWDATP

Best Arabidopsis Sequence Match ( AT1G25240.1 )
(BLAST)

001: MKLWKRASGA LKDRKTLFTI GFSRKTSFRN PDLDSAIIHA TSHDDSSVDY HNAHRVYKWI RSSPANLKPL VHALSSRVNR TRSWIVALKA LMLVHGVLCC
101: KVTSLQEIRR LPFDLSDFSD GHSRPSKTWG FNAFIRAYFS FLDQYSFFLS DQIRRRHKKP QLDSVNQELE RIEKLQSLLH MLLQIRPMAD NMKKTLILEA
201: MDCVVIEIFD IYGRICSAIA KLLIKIHPAA GKAEAVIALK IVKKATSQGE DLALYFEFCK EFGVSNAHDI PKFVTIPEED IKAIEKVING VEEEEVKKKE
301: DEVEEEKSII LVERPELQTI ITDKWEIFED DFCFTCKDIK ETDQHRKFNM DPSPLPLIVI DEPVYFTHTL PDLITF

Arabidopsis Description

ENTH/VHS/GAT family protein [Source:TAIR;Acc:AT1G25240]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.