Factsheet for Solyc04g008350.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400075705	Potato	mitochondrion	93.89	94.13
Solyc01g005070.2.1	Tomato	mitochondrion	57.76	57.04
VIT_01s0011g06370.t01	Wine grape	mitochondrion	45.8	46.75
AT1G25240.2	Thale cress	mitochondrion	42.24	44.03
KRG89239	Soybean	cytosol, mitochondrion	43.0	44.01
KRH42490	Soybean	cytosol	45.04	43.81
CDY60368	Canola	mitochondrion	41.73	43.39
CDY64692	Canola	mitochondrion	41.73	43.27
Bra012491.1-P	Field mustard	mitochondrion	41.48	43.12
KRH58584	Soybean	mitochondrion	43.77	43.11
Bra024772.1-P	Field mustard	mitochondrion	41.22	42.97
CDY57160	Canola	mitochondrion	41.22	42.86
CDY03862	Canola	mitochondrion	40.97	42.26
KRH49763	Soybean	mitochondrion	41.48	41.9
CDY12691	Canola	mitochondrion	37.66	40.66
Bra033960.1-P	Field mustard	mitochondrion	37.66	40.66
CDX81471	Canola	mitochondrion	37.91	40.49
AT1G68110.1	Thale cress	mitochondrion	38.68	40.11
CDY45281	Canola	cytosol	33.59	38.48
CDY01884	Canola	mitochondrion	34.86	38.38
AT1G14686.1	Thale cress	cytosol	32.82	38.05
CDX96047	Canola	mitochondrion	34.86	37.95
Bra004282.1-P	Field mustard	mitochondrion	34.86	37.95
CDY41097	Canola	cytosol	33.08	37.79
Bra026195.1-P	Field mustard	cytosol	33.59	37.08
AT2G01920.1	Thale cress	mitochondrion	27.48	34.62
GSMUA_Achr7P18620_001	Banana	mitochondrion	33.33	33.76
EES13983	Sorghum	mitochondrion	32.32	31.59
GSMUA_Achr8P22890_001	Banana	mitochondrion	31.81	31.49
Zm00001d049990_P001	Maize	mitochondrion	31.04	31.44
Os08t0467300-01	Rice	mitochondrion	31.04	30.81
GSMUA_Achr7P02390_001	Banana	cytosol	32.57	30.77
Zm00001d005869_P001	Maize	mitochondrion	29.77	29.4
EER96828	Sorghum	mitochondrion	29.52	28.86
GSMUA_Achr3P20230_001	Banana	mitochondrion	23.41	27.79
TraesCS5A01G297400.1	Wheat	mitochondrion	25.95	27.06
TraesCS5B01G296700.1	Wheat	mitochondrion	26.21	26.96
HORVU7Hr1G089710.1	Barley	mitochondrion	11.7	25.99
Zm00001d031760_P001	Maize	mitochondrion	32.32	25.81
Solyc12g017440.1.1	Tomato	cytosol	18.83	24.75
HORVU5Hr1G078270.1	Barley	cytosol	26.21	23.36
TraesCS5D01G304500.1	Wheat	mitochondrion	25.45	22.62
Solyc01g005170.1.1	Tomato	cytosol, mitochondrion, plastid	18.32	17.39
Solyc02g043810.2.1	Tomato	cytosol	23.41	15.92
Solyc08g059660.1.1	Tomato	cytosol	25.45	15.72
Solyc04g007860.2.1	Tomato	cytosol, plastid	21.63	15.1
Solyc07g008060.1.1	Tomato	cytosol	23.16	14.82
Solyc06g011450.1.1	Tomato	cytosol	23.16	14.82
Solyc01g104870.2.1	Tomato	cytosol, mitochondrion	21.63	14.63
Solyc07g007820.2.1	Tomato	cytosol	20.61	14.39
Solyc12g010530.1.1	Tomato	cytosol	20.1	13.3
Solyc07g049380.1.1	Tomato	cytosol	22.9	12.11
Solyc12g006000.1.1	Tomato	cytosol	22.14	11.95
Solyc11g044860.1.1	Tomato	cytosol	14.25	11.2
Solyc12g017430.1.1	Tomato	nucleus	2.8	5.19

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2	InterPro:ENTH
InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289
GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942
InterPro:IPR013809	InterPro:IPR014712	UniProt:K4BNZ1	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951
PANTHER:PTHR22951:SF19	SUPFAM:SSF48464	SUPFAM:SSF89009	EnsemblPlantsGene:Solyc04g008350.1	EnsemblPlants:Solyc04g008350.1.1	UniParc:UPI0002766F68
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4:-:2006028..2007209

Molecular Weight (calculated)

45465.0 Da

IEP (calculated)

5.580

GRAVY (calculated)

-0.227

Length

393 amino acids

Sequence
(BLAST)

001: MRLWRKVSGL LKDQNSVWIS SLSRRTALRN PDIEAAVIKA TSHDEFSMNM KNVDRVFRWL RLSSTNLKPL IWAISVRTEK TKSWVVAIKV LILMHGLYST
101: RLPCVQRIGR LTFDLSNFED GHSRNIEMQG INAFIRAYFM FLDQKSYFLY IEMEEKRSMV KLNKNMVVQN LENEEKENYS MAQDLVLLEK LQTLLDMLLN
201: IRPLSYSTIV PLILEAMDCV VTEIFDVYSR IRLGIARVLS RINVIGKVEA TLALKIMKKA NIQGVELSQY FEFNRDIGVR NAEICPIVDQ IPNEEIKELE
301: EIINGGPSDS SEKIDEINQH IVIYEQKESE TKLKTIITNR WETFDEEHGA DDSSAIVNFK SRINPFEDYS ELTNSTNNVP VKPQELPDLI SFT

Best Arabidopsis Sequence Match ( AT1G25240.1 )
(BLAST)

001: MKLWKRASGA LKDRKTLFTI GFSRKTSFRN PDLDSAIIHA TSHDDSSVDY HNAHRVYKWI RSSPANLKPL VHALSSRVNR TRSWIVALKA LMLVHGVLCC
101: KVTSLQEIRR LPFDLSDFSD GHSRPSKTWG FNAFIRAYFS FLDQYSFFLS DQIRRRHKKP QLDSVNQELE RIEKLQSLLH MLLQIRPMAD NMKKTLILEA
201: MDCVVIEIFD IYGRICSAIA KLLIKIHPAA GKAEAVIALK IVKKATSQGE DLALYFEFCK EFGVSNAHDI PKFVTIPEED IKAIEKVING VEEEEVKKKE
301: DEVEEEKSII LVERPELQTI ITDKWEIFED DFCFTCKDIK ETDQHRKFNM DPSPLPLIVI DEPVYFTHTL PDLITF

Arabidopsis Description

ENTH/VHS/GAT family protein [Source:TAIR;Acc:AT1G25240]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.