CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004282.1-P	Field mustard	mitochondrion	99.45	99.45
CDY01884	Canola	mitochondrion	95.57	96.64
CDY12691	Canola	mitochondrion	77.56	76.92
CDX81471	Canola	mitochondrion	77.84	76.36
AT1G68110.1	Thale cress	mitochondrion	75.62	72.03
CDY64692	Canola	mitochondrion	63.71	60.69
CDY03862	Canola	mitochondrion	62.6	59.32
CDY60368	Canola	mitochondrion	62.05	59.26
CDY57160	Canola	mitochondrion	61.5	58.73
VIT_01s0011g06370.t01	Wine grape	mitochondrion	44.04	41.3
Solyc01g005070.2.1	Tomato	mitochondrion	42.66	38.69
PGSC0003DMT400058608	Potato	mitochondrion	42.38	38.25
CDY45281	Canola	cytosol	34.35	36.15
KRH58584	Soybean	mitochondrion	39.89	36.09
CDY41097	Canola	cytosol	34.07	35.76
PGSC0003DMT400075705	Potato	mitochondrion	38.5	35.46
KRH42490	Soybean	cytosol	39.61	35.4
Solyc04g008350.1.1	Tomato	mitochondrion	37.95	34.86
KRG89239	Soybean	cytosol, mitochondrion	36.29	34.11
KRH49763	Soybean	mitochondrion	35.46	32.9
GSMUA_Achr7P18620_001	Banana	mitochondrion	35.18	32.73
EES13983	Sorghum	mitochondrion	36.29	32.59
Os08t0467300-01	Rice	mitochondrion	34.9	31.82
Zm00001d049990_P001	Maize	mitochondrion	33.52	31.19
EER96828	Sorghum	mitochondrion	33.8	30.35
Zm00001d005869_P001	Maize	mitochondrion	32.96	29.9
GSMUA_Achr8P22890_001	Banana	mitochondrion	32.13	29.22
GSMUA_Achr3P20230_001	Banana	mitochondrion	25.76	28.1
GSMUA_Achr7P02390_001	Banana	cytosol	32.13	27.88
TraesCS5A01G297400.1	Wheat	mitochondrion	28.25	27.06
TraesCS5B01G296700.1	Wheat	mitochondrion	28.25	26.7
Zm00001d031760_P001	Maize	mitochondrion	33.24	24.39
HORVU5Hr1G078270.1	Barley	cytosol	28.81	23.58
HORVU7Hr1G089710.1	Barley	mitochondrion	11.36	23.16
TraesCS5D01G304500.1	Wheat	mitochondrion	27.98	22.85
CDY42239	Canola	cytosol	21.05	22.55
CDX93766	Canola	mitochondrion	18.28	17.79
CDY41768	Canola	cytosol, mitochondrion	19.11	17.34
CDY50184	Canola	mitochondrion	17.45	17.12
CDY71126	Canola	cytosol, mitochondrion	19.67	16.67
CDY47927	Canola	cytosol	22.99	16.44
CDY52732	Canola	cytosol	24.1	14.87
CDY38276	Canola	cytosol	24.1	14.7
CDY18283	Canola	cytosol, nucleus, peroxisome	19.39	14.58
CDX68831	Canola	cytosol	23.82	14.55
CDY15448	Canola	mitochondrion	22.99	14.51
CDY32494	Canola	mitochondrion	22.99	14.51
CDX75232	Canola	cytosol	23.82	14.5
CDY35361	Canola	cytosol	23.55	14.38
CDY17660	Canola	cytosol	22.71	14.36
CDY04095	Canola	cytosol	22.71	14.36
CDY36239	Canola	cytosol	22.71	14.36
CDX76976	Canola	cytosol	23.55	14.33
CDY11530	Canola	cytosol	22.99	14.31
CDY48813	Canola	cytosol	22.71	14.07
CDY17459	Canola	cytosol	22.16	14.04
CDY12401	Canola	cytosol, mitochondrion	20.78	13.89
CDY09433	Canola	cytosol, mitochondrion	22.16	13.86
CDY21904	Canola	mitochondrion	22.71	13.69
CDY15531	Canola	cytosol, golgi, nucleus	22.71	13.44
CDX94400	Canola	cytosol	22.16	13.42
CDX89382	Canola	cytosol	22.16	13.31
CDY22070	Canola	mitochondrion	22.16	13.29
CDY45299	Canola	mitochondrion	25.21	13.23
CDY53525	Canola	cytosol, mitochondrion	24.93	12.91
CDX86594	Canola	cytosol, golgi, nucleus	22.16	12.31
CDY53396	Canola	cytosol	19.94	12.1
CDX89917	Canola	cytosol	15.51	11.94
CDY18145	Canola	cytosol	14.96	11.59
CDX76760	Canola	cytosol	12.47	9.64
CDX76977	Canola	cytosol	13.85	9.58
CDX86691	Canola	cytosol, mitochondrion	24.1	8.61
CDY37444	Canola	nucleus	3.05	3.91

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	GO:A0A078E4N9	InterPro:ANTH_dom	EnsemblPlants:CDX96047
ProteinID:CDX96047	ProteinID:CDX96047.1	InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043
GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	EnsemblPlantsGene:GSBRNA2T00102084001	InterPro:IPR008942	InterPro:IPR013809
InterPro:IPR014712	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF19	SMART:SM00273
SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI0004EF1706	SEG:seg	:	:

Description

BnaA07g26840D

Coordinates

chrLK031892:-:795604..796689

Molecular Weight (calculated)

41344.1 Da

IEP (calculated)

8.281

GRAVY (calculated)

-0.149

Length

361 amino acids

Sequence
(BLAST)

001: MKLWKRAAAA IKDRKSLLAV GFSRRTSHHN LDLEAAIIKA TSHDSSSVDY SNAHRVYKWI RSSPHLNLKT LIHTLSSRVS HTRSWIVSLK SLMLLHGVIS
101: CKLPSVLGEL RRLPFDLSDF SDGHSCLSKT WGFNIFVRAY YAFLRSYASF LSDQFHRRPV NRRSSVNQET ERIQKLQSLL ELILQIRPIA DNMKRTLILE
201: AMDCIVIESI NIYGRICSGV IRMLPSSGKA DAAATLKIIN KATSQGEDLA VYFEFCKGFG VPNARDTPQF VSIPKAEVET IKNMIENVGE EEVVEEEKGM
301: VVLEKPRLET IITEKWEIFE DDECCFHEKV IKEYQKHTLP LIVSYQEPVY IEYMMPDLIT F

Best Arabidopsis Sequence Match ( AT1G68110.1 )
(BLAST)

001: MKLWKRAAAA IKDRKSLLAV GFSRRNSSYR NADLEAAIIK ATSHDDSSVD YSNAHRVYKW IRSSPLNLKT LVYAISSRVN HTRSWIVALK SLMLLHGVLC
101: CKVPSVVGEF RRLPFDLSDF SDGHSCLSKT WGFNVFVRTY FAFLHHYSSF LSDQIHRLRG NNRRSLEKTS DSVIQELERI QKLQSLLDMI LQIRPVADNM
201: KKTLILEAMD CLVIESINIY GRICGAVMKV LPLAGKSEAA TVLKIVNKTT SQGEDLIVYF EFCKGFGVSN AREIPQFVRI PEEEVEAIEK MIDTVQEKPK
301: LEKDEEKEDE KAMVVLEQPK KLQTIITDKW EIFEDDYRCF DRKDKWEIFE DEYHQNHLPL ITMNQPVYIT YTMPDLITF

Arabidopsis Description

Putative clathrin assembly protein At1g68110 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9X5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.