CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45299	Canola	mitochondrion	93.83	95.06
AT1G14910.1	Thale cress	mitochondrion	77.33	77.89
CDY36239	Canola	cytosol	58.82	71.8
CDY17660	Canola	cytosol	58.82	71.8
CDY17459	Canola	cytosol	57.68	70.53
CDY09433	Canola	cytosol, mitochondrion	58.11	70.19
CDY04095	Canola	cytosol	57.39	70.05
CDY48813	Canola	cytosol	58.39	69.81
KRH58627	Soybean	nucleus	56.53	69.24
KRH42533	Soybean	cytosol	56.1	68.84
VIT_01s0011g05330.t01	Wine grape	cytosol, mitochondrion	54.66	67.2
KRH38239	Soybean	cytosol	51.79	65.16
CDY42239	Canola	cytosol	31.42	64.99
Solyc04g007860.2.1	Tomato	cytosol, plastid	52.08	64.48
PGSC0003DMT400075923	Potato	cytosol	52.08	64.48
TraesCS1D01G375800.1	Wheat	cytosol, mitochondrion, plastid	49.21	60.71
TraesCS1A01G369700.1	Wheat	cytosol, mitochondrion, plastid	49.21	60.71
Zm00001d038892_P001	Maize	mitochondrion	48.92	60.57
GSMUA_Achr9P21890_001	Banana	cytosol	48.64	60.54
GSMUA_Achr4P13420_001	Banana	cytosol	46.34	60.49
TraesCS1B01G388800.1	Wheat	cytosol, mitochondrion, plastid	48.92	60.46
EES19899	Sorghum	cytosol, mitochondrion, plastid	48.49	59.93
Os05t0549000-01	Rice	plasma membrane	48.35	59.44
Os01t0694900-01	Rice	cytosol	48.21	59.15
TraesCS3B01G292000.2	Wheat	cytosol, mitochondrion, plastid	47.2	58.54
TraesCS3A01G258900.1	Wheat	cytosol	46.92	58.5
EES01312	Sorghum	cytosol	47.2	58.44
TraesCS3D01G259000.2	Wheat	cytosol	47.2	58.44
Zm00001d009452_P007	Maize	cytosol, mitochondrion, plastid	45.19	54.12
HORVU1Hr1G078340.3	Barley	plastid	48.92	53.87
CDY47927	Canola	cytosol	37.59	51.88
CDY52732	Canola	cytosol	43.19	51.45
CDY41768	Canola	cytosol, mitochondrion	29.27	51.26
Zm00001d043773_P003	Maize	cytosol	46.05	51.2
CDY38276	Canola	cytosol	43.33	51.01
CDY71126	Canola	cytosol, mitochondrion	30.99	50.7
CDX94400	Canola	cytosol	41.75	48.83
CDX89382	Canola	cytosol	41.89	48.59
CDY12401	Canola	cytosol, mitochondrion	36.59	47.22
CDX76976	Canola	cytosol	24.82	29.17
CDY35361	Canola	cytosol	24.68	29.1
CDY11530	Canola	cytosol	24.1	28.97
CDY15448	Canola	mitochondrion	23.53	28.67
CDX75232	Canola	cytosol	23.82	27.99
CDX68831	Canola	cytosol	23.67	27.92
CDY32494	Canola	mitochondrion	22.67	27.62
CDY22070	Canola	mitochondrion	23.53	27.24
CDY21904	Canola	mitochondrion	23.39	27.21
CDY12691	Canola	mitochondrion	13.63	26.1
CDX81471	Canola	mitochondrion	13.49	25.54
CDY64692	Canola	mitochondrion	13.63	25.07
CDX96047	Canola	mitochondrion	12.91	24.93
CDY01884	Canola	mitochondrion	12.77	24.93
CDY03862	Canola	mitochondrion	13.34	24.41
CDX89917	Canola	cytosol	15.93	23.67
CDY60368	Canola	mitochondrion	12.77	23.55
CDY18145	Canola	cytosol	15.64	23.39
CDY57160	Canola	mitochondrion	12.63	23.28
CDY50184	Canola	mitochondrion	12.2	23.1
CDY18283	Canola	cytosol, nucleus, peroxisome	15.78	22.92
CDX93766	Canola	mitochondrion	12.2	22.91
CDY45281	Canola	cytosol	11.05	22.45
CDY41097	Canola	cytosol	11.05	22.38
CDX76977	Canola	cytosol	16.21	21.65
CDX76760	Canola	cytosol	14.2	21.2
CDY15531	Canola	cytosol, golgi, nucleus	18.22	20.82
CDX86594	Canola	cytosol, golgi, nucleus	18.51	19.85
CDY53396	Canola	cytosol	16.79	19.66
CDY37444	Canola	nucleus	7.03	17.44
CDX86691	Canola	cytosol, mitochondrion	24.25	16.72

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.6.2	GO:A0A078IR69	UniProt:A0A078IR69	InterPro:ANTH_dom
EnsemblPlants:CDY53525	ProteinID:CDY53525	ProteinID:CDY53525.1	InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987
GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	EnsemblPlantsGene:GSBRNA2T00010873001	InterPro:IPR008942
InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF54
SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI0004EEF730	SEG:seg	:

Description

BnaC05g11150DBnaC05g11150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IR69]

Coordinates

chrLK033210:+:44070..48140

Molecular Weight (calculated)

76476.7 Da

IEP (calculated)

4.427

GRAVY (calculated)

-0.348

Length

697 amino acids

Sequence
(BLAST)

001: MGTLQSFRRA YGALKDTTKV GLVRVNSDYA DIEVAIVKAT NHVECPPKDR HLTKIFIATS ATRPRADVAY CIHTLSRRLH KTRNWTVALK ALVVLHRLVR
101: EGDPTFREEL LNFSRKGRFL QLSNFKDDSS TAAWDCSVWV RAYALFLEER LQCFRVLKYD IEAERLPKVS PGQEKGYSKT RDLDGEQLLE QLPALQQLLH
201: RLMGCKPEGA AKHNHIIQYA LALVLKESFK VYCAINEGII NLVEKFFEMP RHDAIKALDI YKRAGSQAGN LSHFYEVCKG LEIARNFQFP VLREPPQSFL
301: ATMEEYMRDA PQMVDVSDGP LLLTYRPDDE LTDEPAHEEH EPSLPSDSTV IPSEETQPPA SAETPQNLID TDDLLGLNND APDPLEILDQ NALALALVST
401: DVESSFFDLG QARDSDPSGW ELALVTTPSS DISATTERQL AGGLDTLTLN SLYDDVAYRA AQQPAYGAPA PNPFEVQDPF AFSNSVSAPS AESNPFGPYQ
501: PAYQQQQQQE LQVAPGAANP FGDFEDFPVV AVSEPQKTTG FGQFPEPQMT TGFGGNPVFA VSEPQMTTGF GQFPVAAVSE PQVTTGFEEF PVVNVSQPQM
601: TTGFGELPVA AASEPQMTAG FGEFPVFAVS EPQMTTEPQM TSGPVVPVSE EQKNSGLGEF SVITASEPQK TTGFGEFPAN AAGGHQQYNS SNPFGGM

Best Arabidopsis Sequence Match ( AT1G14910.1 )
(BLAST)

001: MGTLQSWRRA YGALKDTTKV GLVRVNSDYA ELDVAIVKAT NHVECPPKDR HLRKIFLATS AIRPRADVAY CIHALSRRLH KTRNWTVALK ALLVIHRLLR
101: DGDPTFREEL LNFSQKGRIM QISNFKDDSS PVAWDCSGWV RTYALFLEER LECFRVLKYD IEAERLPKVS PGQEKGYSKT RDLDGEKLLE QLPALQQLLH
201: RLIGCKPEGA AKHNHIIQYA LSLVLKESFK VYCAINEGII NLVEKFFEMP RHEAIKALEI YKRAGLQAGN LSAFYEVCKG LELARNFQFP VLREPPQSFL
301: TTMEEYMRDA PQMVDVTSGP LLLTYTPDDG LTSEDVGPSH EEHETSSPSD SAVVPSEETQ LSSQSPPSVE TPQNFIDTDD LLGLHDDTPD PLAILDQNAL
401: ALALVSNDVD SSPFSFGQAR DLDPSGWELA LVTTPSNDIS AATERQLAGG LDTLTLNSLY DDGALRAAQQ PAYGVPASNP FEVQDLFAFS DSVSPPSAVN
501: NPFGLYEPTY HQQEQQPQLQ VAPSPANPFG DFGEFPIVPV SEPQSTTSFG AFPVPVSEPS NTTGFGEIPV VPVTEPPNTT AFGEFPVVPV SEPQNITGFG
601: ALPVTPASEP SNTTGFGEFP VVSVSAPQNT TGFGALPVIP VSEPSKTTGL GEFPVVPVSE PQNTTGFGEF PVNAGAHEQH NSNNPFGSTG FL

Arabidopsis Description

Putative clathrin assembly protein At1g14910 [Source:UniProtKB/Swiss-Prot;Acc:P94017]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.