Factsheet for HORVU1Hr1G078340.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G375800.1	Wheat	cytosol, mitochondrion, plastid	86.57	96.99
TraesCS1B01G388800.1	Wheat	cytosol, mitochondrion, plastid	86.1	96.63
TraesCS1A01G369700.1	Wheat	cytosol, mitochondrion, plastid	86.1	96.46
Os05t0549000-01	Rice	plasma membrane	78.99	88.18
EES19899	Sorghum	cytosol, mitochondrion, plastid	77.73	87.23
Zm00001d038892_P001	Maize	mitochondrion	76.78	86.32
Zm00001d009452_P007	Maize	cytosol, mitochondrion, plastid	70.93	77.15
GSMUA_Achr9P21890_001	Banana	cytosol	66.98	75.71
GSMUA_Achr4P13420_001	Banana	cytosol	63.03	74.72
KRH42533	Soybean	cytosol	61.77	68.84
VIT_01s0011g05330.t01	Wine grape	cytosol, mitochondrion	60.82	67.9
KRH58627	Soybean	nucleus	60.98	67.84
Solyc04g007860.2.1	Tomato	cytosol, plastid	58.93	66.25
PGSC0003DMT400075923	Potato	cytosol	58.77	66.07
KRH38239	Soybean	cytosol	57.03	65.16
AT2G01600.1	Thale cress	cytosol, mitochondrion	56.4	62.52
Bra024871.1-P	Field mustard	cytosol	56.4	62.52
CDY17660	Canola	cytosol	56.4	62.52
CDY36239	Canola	cytosol	56.08	62.17
CDY09433	Canola	cytosol, mitochondrion	55.77	61.18
CDY48813	Canola	cytosol	56.24	61.06
Bra017439.1-P	Field mustard	cytosol	54.82	60.77
CDY04095	Canola	cytosol	54.82	60.77
CDY17459	Canola	cytosol	54.66	60.7
HORVU7Hr1G109970.5	Barley	cytosol	48.82	54.02
HORVU7Hr1G097510.7	Barley	mitochondrion	42.02	52.05
HORVU6Hr1G030980.1	Barley	cytosol	49.92	51.05
AT1G14910.1	Thale cress	mitochondrion	54.03	49.42
HORVU7Hr1G028590.1	Barley	cytosol	43.92	49.2
Bra026647.1-P	Field mustard	cytosol	55.77	49.03
CDY53525	Canola	cytosol, mitochondrion	53.87	48.92
CDY45299	Canola	mitochondrion	53.08	48.84
Bra026179.1-P	Field mustard	cytosol, mitochondrion	53.24	43.99
HORVU6Hr1G087330.4	Barley	cytosol	38.7	42.1
HORVU4Hr1G059660.3	Barley	cytosol, mitochondrion, plastid	29.23	28.64
HORVU1Hr1G065590.1	Barley	cytosol	25.91	27.06
HORVU0Hr1G000720.3	Barley	cytosol	25.75	26.9
HORVU1Hr1G005290.1	Barley	cytosol	25.28	25.89
HORVU7Hr1G089710.1	Barley	mitochondrion	5.85	20.9
HORVU4Hr1G015050.1	Barley	mitochondrion	12.64	20.25
HORVU5Hr1G078270.1	Barley	cytosol	12.48	17.91

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.6.2	UniProt:A0A287GDB1	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2
InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543
GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268
EnsemblPlantsGene:HORVU1Hr1G078340	EnsemblPlants:HORVU1Hr1G078340.3	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651
PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF56	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009
UniParc:UPI000B47DC95	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:519993456..520001653

Molecular Weight (calculated)

69910.5 Da

IEP (calculated)

5.553

GRAVY (calculated)

-0.492

Length

633 amino acids

Sequence
(BLAST)

001: RTPTSQKAPP SPPLSHTPPQ VTRTVTPRPR LRETVANKQP TPHPKRRHSQ RAAAGAEPGE GEGEGEGEMA SMQSWRKAYG AIKDTTTVSL ANINSDFKDL
101: DVAIVKATNH VECPPKERHL RKIAAATSIA RPRADIAYCI HALSRRLSKT RNWIVALKTL VVVHRLLREG DPTFREELLN FTQRGRILQL SNFKDDSSPI
201: AWDCSAWVRT YGQFLEERLE CFRILKYDVE AERLSKQGQG PEKGHSRTRD LDSQDLLEQL PALQQLLYRL VGCRPEGAAN NNYLVQYALA LVLKESFKIY
301: CAINDGIINL VDKFFEMARH EALKALEIYR RAGQQAGNLS DFYENCRGLE LARNFQFPTL REPPQTFLVT MEEYVRDAPR MVPVREPLEF PERLLLTYKP
401: EEAEEVSVPD PVEEEQPPVE EPVPVQSVAE VVSPPSKPVV ADTGDLLGLN DPSPAVSAIE ESNALALAII PSDPSTSTTS STTWQDKGFD PTGWELALVT
501: APSNTNSSVT DSQLGGGLDK LILDSLYDEG AYRQSQQQQL YGSSAPNPFM TNDPFAMSNH VAAPSSVQMA AMSQQQQQIP TMIHQNPFGP PIQPQHPGAG
601: PAAVNPFLDS GFGAFPAANN QQQQANPFGG SLL

Best Arabidopsis Sequence Match ( AT2G01600.1 )
(BLAST)

001: MGTLQSWRKA YGALKDSTKV GLVRVNSEYA DLDVAIVKAT NHVECPPKDR HLRKIFAATS VTRARADVAY CIHALSRRLH KTRNWTVALK TLIVIHRLLR
101: EGDPTFREEL LNFSQRGRIL QLSNFKDDSS PIAWDCSAWV RTYALFLEER LECFRVLKYD TEAERLPKSN PGQDKGYSRT RDLDGEELLE QLPALQQLLY
201: RLIGCRPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII NLIDKFFEMA KHEAITSLEI YKRAGQQARS LSDFYEACKG LELARNFQFP VLREPPQSFL
301: TTMEEYIKEA PRVVDVPAEP LLLTYRPDDG LTTEDTEPSH EEREMLPSDD VVVVSEETEP SPPPPPSANA QNFIDTDDLW GLNTGAPDTS VIEDQNALAL
401: AIVSTDADPP TPHFGQPNNY DPTGWELALV TAPSSDISAS TERKLAGGLD TLTLSSLYDD GAYIASQRPV YGAPAPNPFA SHDPFASSNG TAPPPQQQAV
501: NNPFGAYQQT YQHQPQPTYQ HQSNPPTNNS NPFGDFGEFP VNPVSQQPNT SGYGDFSVNQ HNNPFRSTGL I

Arabidopsis Description

Putative clathrin assembly protein At2g01600 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBH2]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.