Factsheet for Bra017439.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04095	Canola	cytosol	100.0	100.0
Bra024871.1-P	Field mustard	cytosol	90.37	90.37
AT2G01600.1	Thale cress	cytosol, mitochondrion	86.34	86.34
KRH42533	Soybean	cytosol	71.8	72.18
KRH58627	Soybean	nucleus	71.63	71.88
Bra026647.1-P	Field mustard	cytosol	90.19	71.53
VIT_01s0011g05330.t01	Wine grape	cytosol, mitochondrion	69.53	70.02
Solyc04g007860.2.1	Tomato	cytosol, plastid	68.83	69.8
PGSC0003DMT400075923	Potato	cytosol	68.48	69.45
KRH38239	Soybean	cytosol	67.08	69.13
GSMUA_Achr4P13420_001	Banana	cytosol	60.07	64.23
GSMUA_Achr9P21890_001	Banana	cytosol	62.17	63.39
Zm00001d038892_P001	Maize	mitochondrion	61.65	62.52
EES19899	Sorghum	cytosol, mitochondrion, plastid	61.65	62.41
Os05t0549000-01	Rice	plasma membrane	61.82	62.26
TraesCS1D01G375800.1	Wheat	cytosol, mitochondrion, plastid	60.95	61.59
TraesCS1B01G388800.1	Wheat	cytosol, mitochondrion, plastid	60.77	61.52
Os01t0694900-01	Rice	cytosol	61.12	61.44
TraesCS1A01G369700.1	Wheat	cytosol, mitochondrion, plastid	60.77	61.42
EES01312	Sorghum	cytosol	59.54	60.39
TraesCS3B01G292000.2	Wheat	cytosol, mitochondrion, plastid	59.37	60.32
TraesCS3A01G258900.1	Wheat	cytosol	58.84	60.11
TraesCS3D01G259000.2	Wheat	cytosol	59.02	59.86
Zm00001d009452_P007	Maize	cytosol, mitochondrion, plastid	56.39	55.33
HORVU1Hr1G078340.3	Barley	plastid	60.77	54.82
Zm00001d043773_P003	Maize	cytosol	57.79	52.63
Bra026179.1-P	Field mustard	cytosol, mitochondrion	69.18	51.57
Bra020460.1-P	Field mustard	cytosol	53.59	51.52
Bra002750.1-P	Field mustard	cytosol	53.24	51.26
Bra013934.1-P	Field mustard	cytosol	52.01	49.42
Bra038937.1-P	Field mustard	mitochondrion	45.01	46.73
Bra030518.1-P	Field mustard	mitochondrion	29.6	28.64
Bra032561.1-P	Field mustard	mitochondrion	29.6	28.31
Bra036250.1-P	Field mustard	mitochondrion	29.42	27.95
Bra007800.1-P	Field mustard	cytosol	29.25	27.24
Bra011333.1-P	Field mustard	cytosol	28.9	26.32
Bra034252.1-P	Field mustard	cytosol	29.77	26.19
Bra033369.1-P	Field mustard	cytosol	20.49	24.95
Bra012491.1-P	Field mustard	mitochondrion	16.46	24.87
Bra033960.1-P	Field mustard	mitochondrion	15.76	24.73
Bra024772.1-P	Field mustard	mitochondrion	15.41	23.34
Bra028000.1-P	Field mustard	mitochondrion	15.06	23.18
Bra004282.1-P	Field mustard	mitochondrion	14.36	22.71
Bra026195.1-P	Field mustard	cytosol	13.84	22.19
Bra030600.1-P	Field mustard	cytosol, golgi, nucleus	22.59	20.0
Bra015381.1-P	Field mustard	cytosol	22.24	19.94

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.6.2	InterPro:ANTH_dom	EnsemblPlantsGene:Bra017439	EnsemblPlants:Bra017439.1
EnsemblPlants:Bra017439.1-P	InterPro:Clathrin_AP_dom2	ncoils:Coil	InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043
GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712
UniProt:M4DLQ8	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF54	SMART:SM00273
SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI000254233F	SEG:seg	:	:

Description

AT2G01600 (E=3e-260) | epsin N-terminal homology (ENTH) domain-containing protein

Coordinates

chrA09:-:15379274..15382692

Molecular Weight (calculated)

63321.2 Da

IEP (calculated)

4.797

GRAVY (calculated)

-0.426

Length

571 amino acids

Sequence
(BLAST)

001: MGTLQTWRKA YGALKDTTKV GLVRVNSDYA DLDVAIVKAT NHVECPPKDR HLRKIFAATA VTRARADVAY CIHALSRRLH KTRNWTVALK TLIVIHRLLR
101: EGDPTFREEL LNFSQRVRIL QISNFKDDSG PIAWDCSAWV RTYALFLEER LECFRVLRYD TEAEPLTKAT PGHDKGYSRT RDLDGEEILL QLPALQQLLY
201: RLIGCRPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII NLIDKFFEMP KHEAITSLEI YKRAGQQARS LSEFYEACKG LELARNFQFP VLREPPQSFL
301: ATMEEYIKEA PRAVDAPAEP LLLTYRPDDG LPDQDTEPSH EERELVLPSD DVVLASEDTE YSPPPPPSAT TQSQSIIDTD DLLGLNTSAP DASAIEDQNA
401: LALAIISNDG NSSTPRSFQA NDYDPTGWEL ALVTTPSNDI SAATDRQLAG GLDTLTLNSL YDDGAYIASQ RPVYGAPAPN PFEVHDPFAT SNGTPPPQQP
501: AVNNPFGAYQ PPYGQHQLQL ALAPNPQSNN NSSNPFGDFG EFPVSQQPNT SGFGDFAVNQ HNNPFRSTGL I

Best Arabidopsis Sequence Match ( AT2G01600.1 )
(BLAST)

001: MGTLQSWRKA YGALKDSTKV GLVRVNSEYA DLDVAIVKAT NHVECPPKDR HLRKIFAATS VTRARADVAY CIHALSRRLH KTRNWTVALK TLIVIHRLLR
101: EGDPTFREEL LNFSQRGRIL QLSNFKDDSS PIAWDCSAWV RTYALFLEER LECFRVLKYD TEAERLPKSN PGQDKGYSRT RDLDGEELLE QLPALQQLLY
201: RLIGCRPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII NLIDKFFEMA KHEAITSLEI YKRAGQQARS LSDFYEACKG LELARNFQFP VLREPPQSFL
301: TTMEEYIKEA PRVVDVPAEP LLLTYRPDDG LTTEDTEPSH EEREMLPSDD VVVVSEETEP SPPPPPSANA QNFIDTDDLW GLNTGAPDTS VIEDQNALAL
401: AIVSTDADPP TPHFGQPNNY DPTGWELALV TAPSSDISAS TERKLAGGLD TLTLSSLYDD GAYIASQRPV YGAPAPNPFA SHDPFASSNG TAPPPQQQAV
501: NNPFGAYQQT YQHQPQPTYQ HQSNPPTNNS NPFGDFGEFP VNPVSQQPNT SGYGDFSVNQ HNNPFRSTGL I

Arabidopsis Description

Putative clathrin assembly protein At2g01600 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBH2]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.