CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58627	Soybean	nucleus	83.39	81.2
KRH42533	Soybean	cytosol	83.03	80.99
VIT_01s0011g05330.t01	Wine grape	cytosol, mitochondrion	74.55	72.84
PGSC0003DMT400075923	Potato	cytosol	72.74	71.58
Solyc04g007860.2.1	Tomato	cytosol, plastid	72.74	71.58
CDY17660	Canola	cytosol	70.58	68.48
AT2G01600.1	Thale cress	cytosol, mitochondrion	70.4	68.3
Bra024871.1-P	Field mustard	cytosol	70.04	67.95
CDY36239	Canola	cytosol	69.86	67.78
CDY17459	Canola	cytosol	69.31	67.37
CDY09433	Canola	cytosol, mitochondrion	70.04	67.24
Bra017439.1-P	Field mustard	cytosol	69.13	67.08
CDY04095	Canola	cytosol	69.13	67.08
CDY48813	Canola	cytosol	70.04	66.55
EES19899	Sorghum	cytosol, mitochondrion, plastid	66.97	65.78
GSMUA_Achr9P21890_001	Banana	cytosol	66.43	65.71
Zm00001d038892_P001	Maize	mitochondrion	66.43	65.36
GSMUA_Achr4P13420_001	Banana	cytosol	62.82	65.17
Os05t0549000-01	Rice	plasma membrane	66.43	64.9
EES01312	Sorghum	cytosol	65.16	64.12
TraesCS1D01G375800.1	Wheat	cytosol, mitochondrion, plastid	65.16	63.89
TraesCS1A01G369700.1	Wheat	cytosol, mitochondrion, plastid	64.98	63.72
TraesCS1B01G388800.1	Wheat	cytosol, mitochondrion, plastid	64.62	63.48
Os01t0694900-01	Rice	cytosol	64.8	63.2
TraesCS3A01G258900.1	Wheat	cytosol	61.73	61.18
TraesCS3B01G292000.2	Wheat	cytosol, mitochondrion, plastid	61.55	60.68
TraesCS3D01G259000.2	Wheat	cytosol	61.55	60.57
Zm00001d009452_P007	Maize	cytosol, mitochondrion, plastid	60.47	57.56
HORVU1Hr1G078340.3	Barley	plastid	65.16	57.03
Zm00001d043773_P003	Maize	cytosol	63.0	55.66
AT1G14910.1	Thale cress	mitochondrion	68.23	54.62
KRH02791	Soybean	cytosol	55.42	53.48
Bra026647.1-P	Field mustard	cytosol	68.77	52.92
KRH19094	Soybean	cytosol	54.69	52.79
KRH12315	Soybean	cytosol	56.32	52.35
CDY53525	Canola	cytosol, mitochondrion	65.16	51.79
CDY45299	Canola	mitochondrion	63.9	51.45
KRH37330	Soybean	cytosol	54.87	51.01
KRH03643	Soybean	mitochondrion	48.92	49.45
KRH20163	Soybean	cytosol	48.74	49.45
Bra026179.1-P	Field mustard	cytosol, mitochondrion	64.08	46.34
KRH05593	Soybean	cytosol	5.42	34.88
KRH54979	Soybean	cytosol	31.23	34.19
KRH10492	Soybean	cytosol, mitochondrion	31.23	29.03
KRH43936	Soybean	cytosol, mitochondrion	30.87	28.84
KRH52429	Soybean	endoplasmic reticulum	32.49	28.08
KRH58332	Soybean	mitochondrion	29.6	28.03
KRH61760	Soybean	mitochondrion	32.31	27.45
KRH20132	Soybean	cytosol	29.24	26.47
KRH41749	Soybean	cytosol	13.36	26.15
KRH09259	Soybean	cytosol, nucleus, peroxisome	18.95	24.42
KRH60451	Soybean	mitochondrion	19.31	24.15
KRH38757	Soybean	cytosol, nucleus, peroxisome	18.41	23.5
KRH42490	Soybean	cytosol	16.43	22.52
KRH58584	Soybean	mitochondrion	16.07	22.31
KRG89239	Soybean	cytosol, mitochondrion	13.0	18.75
KRH49763	Soybean	mitochondrion	13.0	18.51
KRH17907	Soybean	cytosol	24.37	18.49

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	EntrezGene:100796656	MapMan:22.1.6.2	EMBL:ACUP02005765	InterPro:ANTH_dom
InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	EnsemblPlantsGene:GLYMA_09G120600	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136
GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	UniProt:K7LDE5
EnsemblPlants:KRH38239	ProteinID:KRH38239	ProteinID:KRH38239.1	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951
PANTHER:PTHR22951:SF56	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI0002338473	SEG:seg

Description

hypothetical protein

Coordinates

chr9:+:29035421..29043730

Molecular Weight (calculated)

61932.5 Da

IEP (calculated)

5.279

GRAVY (calculated)

-0.294

Length

554 amino acids

Sequence
(BLAST)

001: MATLQSWRKA YGAIKDTTKV GLAHVNSDFA ELDVAVVKAT NHVERPPKDR HLRKILFATS VVRPRADVAY CIHAIARRLA KTRNWTVALK TLIVIHRMLR
101: EGDPTLREEF LNFSQRGRIL QPSNFKDDSS PIAWDCSAWV RTYALYLEER LECFQVLNYD IEAERLAKPV AGEDKGYSRT RDLNSEKLLE QLPALQQLLY
201: RLVGCRPEGA AISNYVIQYA LALVLKESFK IYCAINDGII NLVDKFFEMP RHEAIKAFDV YKRAGQQAES LSDFYEICKR LELARNFQFP VLREPPQSFL
301: VTMEEFIKEA PRVVIVPNEP LLLLTYRPEG VPTIEDNKSS EEQEPSVPVD DIVSNSEPAP PQSRNNFETG DLLGLNDSTP DASLIEERNA LALAIVSTET
401: GSTALDSSGA QARDFDPTEW EIALVSTPST NISSVNERQL AGGLNSLTLS SLYDEGAYRS AQQPVYVVPA PNPFEVQDPF ALSSSIPPTS TVQMAAIAQQ
501: HINPFLHYQP YQPLQQHMLM NPANPFGDAG YGAFPVNPVS HPHNKNPFGS TGLM

Best Arabidopsis Sequence Match ( AT2G01600.1 )
(BLAST)

001: MGTLQSWRKA YGALKDSTKV GLVRVNSEYA DLDVAIVKAT NHVECPPKDR HLRKIFAATS VTRARADVAY CIHALSRRLH KTRNWTVALK TLIVIHRLLR
101: EGDPTFREEL LNFSQRGRIL QLSNFKDDSS PIAWDCSAWV RTYALFLEER LECFRVLKYD TEAERLPKSN PGQDKGYSRT RDLDGEELLE QLPALQQLLY
201: RLIGCRPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII NLIDKFFEMA KHEAITSLEI YKRAGQQARS LSDFYEACKG LELARNFQFP VLREPPQSFL
301: TTMEEYIKEA PRVVDVPAEP LLLTYRPDDG LTTEDTEPSH EEREMLPSDD VVVVSEETEP SPPPPPSANA QNFIDTDDLW GLNTGAPDTS VIEDQNALAL
401: AIVSTDADPP TPHFGQPNNY DPTGWELALV TAPSSDISAS TERKLAGGLD TLTLSSLYDD GAYIASQRPV YGAPAPNPFA SHDPFASSNG TAPPPQQQAV
501: NNPFGAYQQT YQHQPQPTYQ HQSNPPTNNS NPFGDFGEFP VNPVSQQPNT SGYGDFSVNQ HNNPFRSTGL I

Arabidopsis Description

Putative clathrin assembly protein At2g01600 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBH2]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.