CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0016g05480.t01	Wine grape	cytosol	68.14	65.88
PGSC0003DMT400079380	Potato	cytosol, mitochondrion, plastid	64.38	63.96
Solyc07g008060.1.1	Tomato	cytosol	64.05	63.84
KRH52429	Soybean	endoplasmic reticulum	64.38	61.47
KRH61760	Soybean	mitochondrion	64.38	60.43
TraesCS4D01G208100.1	Wheat	cytosol, mitochondrion, plastid	55.23	60.36
Zm00001d030399_P001	Maize	cytosol	33.66	58.86
Zm00001d046121_P001	Maize	cytosol	34.31	57.85
Zm00001d047804_P001	Maize	plasma membrane	59.15	57.1
EER92480	Sorghum	cytosol, mitochondrion, plastid	59.15	56.12
Zm00001d028620_P001	Maize	plasma membrane	58.5	56.02
TraesCS4B01G207200.1	Wheat	cytosol, mitochondrion, plastid	57.68	55.33
GSMUA_Achr9P03950_001	Banana	cytosol, mitochondrion, plastid	47.55	55.22
TraesCS4A01G097200.1	Wheat	cytosol, mitochondrion, plastid	57.35	55.02
Os03t0275500-01	Rice	plasma membrane	58.5	54.99
KRH05593	Soybean	cytosol	7.68	54.65
HORVU4Hr1G059660.3	Barley	cytosol, mitochondrion, plastid	57.19	54.18
Os05t0112101-01	Rice	plasma membrane	49.51	52.15
GSMUA_Achr11P...	Banana	cytosol	38.24	51.32
TraesCS1B01G044800.1	Wheat	cytosol	49.35	48.87
TraesCS1A01G035100.1	Wheat	cytosol	49.18	48.86
TraesCS1D01G036500.1	Wheat	cytosol	49.02	48.54
HORVU1Hr1G005290.1	Barley	cytosol	48.2	47.73
EES18894	Sorghum	cytosol	48.04	47.19
Zm00001d035652_P001	Maize	cytosol	45.59	46.73
GSMUA_Achr6P33420_001	Banana	cytosol, mitochondrion, plastid	46.41	44.94
KRH43936	Soybean	cytosol, mitochondrion	41.99	43.34
KRH10492	Soybean	cytosol, mitochondrion	41.99	43.12
KRH58332	Soybean	mitochondrion	41.01	42.91
KRH58627	Soybean	nucleus	27.45	29.53
KRH41749	Soybean	cytosol	13.56	29.33
KRH38239	Soybean	cytosol	26.47	29.24
KRH42533	Soybean	cytosol	27.12	29.23
KRH20163	Soybean	cytosol	25.82	28.94
KRH02791	Soybean	cytosol	27.12	28.92
KRH03643	Soybean	mitochondrion	25.82	28.83
KRH37330	Soybean	cytosol	27.94	28.69
KRH12315	Soybean	cytosol	27.94	28.69
KRH19094	Soybean	cytosol	26.8	28.57
KRH42490	Soybean	cytosol	17.16	25.99
KRH60451	Soybean	mitochondrion	18.79	25.96
KRH58584	Soybean	mitochondrion	16.83	25.81
KRG89239	Soybean	cytosol, mitochondrion	15.85	25.26
KRH49763	Soybean	mitochondrion	15.36	24.16
KRH09259	Soybean	cytosol, nucleus, peroxisome	15.85	22.56
KRH38757	Soybean	cytosol, nucleus, peroxisome	15.85	22.35
KRH17907	Soybean	cytosol	25.82	21.64
KRH54979	Soybean	cytosol	16.18	19.57

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	EntrezGene:100799406	MapMan:22.1.6.2	EMBL:ACUP02008240	InterPro:ANTH_dom
InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	EnsemblPlantsGene:GLYMA_13G158500	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136
GO:GO:0030276	GO:GO:0048268	UniProt:I1LZP6	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712
EnsemblPlants:KRH20132	ProteinID:KRH20132	ProteinID:KRH20132.1	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951
PANTHER:PTHR22951:SF27	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI000233D1DA	SEG:seg

Description

hypothetical protein

Coordinates

chr13:-:27371526..27373819

Molecular Weight (calculated)

66994.8 Da

IEP (calculated)

5.605

GRAVY (calculated)

-0.274

Length

612 amino acids

Sequence
(BLAST)

001: MASSTIRKAI GVVKDQTSIS IAKVAGNLAP DLEVLIVKAT SHEQVPADEK YVREILTLTS LSRSYINASL VTISKRLNKT RDWIVAIKAL LLVHRLLVDA
101: HPAFEEEIVH STRLGTSRIL NMSDFRDDAH SNSWDQVGFV RVYSLYLDAK VDFVAYRRKL SGGVVESVEF RDEFGSAERE RNEVTPVREM GAERVLKRLN
201: RLLRMLDRVL GCRPSGAAKN NSLVLVALYQ VVRDSFKLYA EVCDVLGVLL DRFTEMEYEH CVKAFDSYVS AAKMMDELVG FYGWCKDTGI ARSSEYPDVQ
301: RITDKLLGTL EGFLKEMSCR PKSPERKLEV KVTVNESQPE ADMNKVKALP APETESFTPP PPMSVAQPNK IAPNSQKQTS DLVDLREDGV SADEQGNKLA
401: LALFSGAATV RTEGSWEAFP SNGESEVKSA WETPAAEAGK ADWELALVEN TSNLSRQKAD LAGGFDPLLL NGMYDQGAVR QHVSTTQLSG GSASSVALPG
501: PGKSATPVLA LPAPDGTVQA VGPQDPFAAS LTVPPPSYVQ IADMERKQHL LVQEQQLWQQ YGRDGMQGQL GLSRVAGAPG YYAPAPQPMM PYGMPQFGGI
601: GQPGGYYPAP YY

Best Arabidopsis Sequence Match ( AT4G32285.2 )
(BLAST)

001: MALSMRKAIG VVKDQTSIGI AKVASNMAPD LEVAIVKATS HDDDQSSDKY IREILSLTSL SRGYVHACVT SVSRRLKKTR DWIVALKALM LVHRLLNEGD
101: PLFQEEILYA TRRGTRILNM SDFRDEAHSS SWDHSAFVRT YASYLDQRLE LALFERRGRN GGGSSSSHQS NGDDGYNRSR DDFRSPPPRT YDYETGNGFG
201: MPKRSRSFGD VNEIGAREEK KSVTPLREMT PERIFGKMGH LQRLLDRFLS CRPTGLAKNS RMILIAMYPV VKESFRLYAD ICEVLAVLLD KFFDMEYTDC
301: VKAFDAYASA AKQIDELIAF YHWCKDTGVA RSSEYPEVQR ITSKLLETLE EFVRDRAKRA KSPERKEIEA PPAPAPPVEE PVDMNEIKAL PPPENHTPPP
401: PPAPEPKPQQ PQVTDDLVNL REDDVSGDDQ GNKFALALFA GPPANNGKWE AFSSDNNVTS AWQNPAAELG KADWELALVE TASNLEHQKA AMGGGLDPLL
501: LNGMYDQGAV RQHVSTSELT GGSSSSVALP LPGKVNSHIL ALPAPDGTVQ KVNQDPFAAS LTIPPPSYVQ MAEMDKKQYL LTQEQQLWQQ YQQEGMRGQA
601: SLAKMNTAQT AMPYGMPPVN GMGPSPMGYY YNNPY

Arabidopsis Description

Probable clathrin assembly protein At4g32285 [Source:UniProtKB/Swiss-Prot;Acc:Q8S9J8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.