CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43936	Soybean	cytosol, mitochondrion	74.19	73.19
KRH10492	Soybean	cytosol, mitochondrion	73.85	72.48
VIT_12s0055g00790.t01	Wine grape	cytosol, mitochondrion	64.27	64.6
PGSC0003DMT400076552	Potato	cytosol, mitochondrion	61.37	61.68
Solyc01g104870.2.1	Tomato	cytosol, mitochondrion	60.51	60.93
CDY15448	Canola	mitochondrion	58.63	59.97
GSMUA_Achr6P18600_001	Banana	cytosol, mitochondrion	54.36	59.89
CDY32494	Canola	mitochondrion	57.44	58.74
Bra030518.1-P	Field mustard	mitochondrion	58.97	58.47
GSMUA_Achr10P...	Banana	mitochondrion	50.09	58.02
Bra032561.1-P	Field mustard	mitochondrion	59.15	57.96
GSMUA_Achr11P...	Banana	cytosol	51.45	57.88
CDY22070	Canola	mitochondrion	58.97	57.31
AT4G02650.1	Thale cress	mitochondrion	59.83	57.28
AT1G03050.1	Thale cress	cytosol, mitochondrion	58.63	57.26
Bra036250.1-P	Field mustard	mitochondrion	58.63	57.07
CDY21904	Canola	mitochondrion	58.12	56.76
PGSC0003DMT400059062	Potato	cytosol	57.09	56.04
CDX89917	Canola	cytosol	43.76	54.58
CDY18145	Canola	cytosol	43.42	54.51
Bra033369.1-P	Field mustard	cytosol	43.59	54.37
Solyc11g044860.1.1	Tomato	cytosol	45.98	53.8
CDY37444	Canola	nucleus	23.08	48.04
HORVU1Hr1G065590.1	Barley	cytosol	47.86	46.2
HORVU0Hr1G000720.3	Barley	cytosol	47.69	46.04
EES18258	Sorghum	cytosol	48.72	45.75
Zm00001d010228_P001	Maize	cytosol	47.52	45.2
TraesCS1A01G266200.1	Wheat	cytosol	46.67	45.12
TraesCS1B01G277200.1	Wheat	cytosol	46.32	44.79
KRH52429	Soybean	endoplasmic reticulum	48.55	44.31
Os01t0881100-01	Rice	mitochondrion	38.97	43.76
KRH61760	Soybean	mitochondrion	48.72	43.71
Os05t0426100-00	Rice	cytosol	49.23	43.24
TraesCS1D01G266400.1	Wheat	mitochondrion	46.67	41.24
KRH20132	Soybean	cytosol	42.91	41.01
KRH05593	Soybean	cytosol	5.98	40.7
KXG33814	Sorghum	cytosol, mitochondrion	39.49	40.6
Zm00001d012220_P001	Maize	cytosol, mitochondrion, nucleus, plastid	38.29	40.36
CDX86691	Canola	cytosol, mitochondrion	58.12	33.63
KRH20163	Soybean	cytosol	30.09	32.23
KRH03643	Soybean	mitochondrion	29.74	31.75
KRH58627	Soybean	nucleus	30.26	31.11
KRH42533	Soybean	cytosol	29.91	30.81
KRH38239	Soybean	cytosol	28.03	29.6
KRH19094	Soybean	cytosol	28.72	29.27
KRH02791	Soybean	cytosol	28.21	28.75
KRH12315	Soybean	cytosol	29.06	28.52
KRH37330	Soybean	cytosol	28.72	28.19
Zm00001d047867_P001	Maize	cytosol	15.21	27.05
KRH41749	Soybean	cytosol	12.31	25.44
KRH60451	Soybean	mitochondrion	18.29	24.15
KRH38757	Soybean	cytosol, nucleus, peroxisome	17.27	23.27
KRH42490	Soybean	cytosol	15.9	23.02
KRG89239	Soybean	cytosol, mitochondrion	15.04	22.92
KRH58584	Soybean	mitochondrion	15.56	22.81
KRH09259	Soybean	cytosol, nucleus, peroxisome	16.75	22.79
KRH49763	Soybean	mitochondrion	14.19	21.34
KRH17907	Soybean	cytosol	26.15	20.96
KRH54979	Soybean	cytosol	18.12	20.95

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	EntrezGene:100808441	MapMan:22.1.6.2	EMBL:ACUP02003251	InterPro:ANTH_dom
InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	EnsemblPlantsGene:GLYMA_05G120800	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136
GO:GO:0030276	GO:GO:0048268	UniProt:I1K2S4	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712
EnsemblPlants:KRH58332	ProteinID:KRH58332	ProteinID:KRH58332.1	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951
PANTHER:PTHR22951:SF12	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI0002339819	SEG:seg

Description

hypothetical protein

Coordinates

chr5:-:31370892..31374949

Molecular Weight (calculated)

66595.9 Da

IEP (calculated)

4.877

GRAVY (calculated)

-0.513

Length

585 amino acids

Sequence
(BLAST)

001: MSPSTLRRAI GAVKDQTSIG LAMVGNSTSL ADLDVAIVKA TRHDEYPAEE KHLKEILSLT CYSRAFISAC VNTLSRRLSK TSSWTVALKT LILIQRLLSD
101: GDPAYEQEIF FSTRRGTRLL NMSDFRGNSK YNSWDFCAFV RTYALYLDER LEYMMQNKRG KRSRFAIDEE EEETMERESR YSREREKNRE ILKVTPLCEM
201: KTEELFSKMQ HLQLLVERFL ACRPTGRAKT HRIVIVALYP IVKESFQIYD NITEILCIFI DRFIGMELPD CIKVYDIFCR VGKQYDELDL FYSWSKSVGI
301: ARSTEYPEIE RVTTKKLEVM DQYIRDKAQH KKLYIQEENN EEEEPEEDMN AIKALPAPEY FNEEPEEVKE ETKEEDIKEE KLVQTEGDLL NLGDDMVTSQ
401: EHGDSLALAL FDGALPTSAT QALPWHAFDD AADWETALVQ SSSNLSNQKP SLGGGFDTLL LDGMYRQAAT NMQRQSHGMN GSASSVALGS AGRPAMLALP
501: APPTSGSGSS LDSADPFAAS LAVAPPAYVQ MSEIEKKQRL LMEEQEMWQQ YARSGMQGNV AFTKLQPNNT YHMGQYPQNY GHYYH

Best Arabidopsis Sequence Match ( AT1G03050.1 )
(BLAST)

001: MGSSKFKRAI GAVKDQTSVG LAKVNGRSAS LSELDVAIVK ATRHEEFPAE EKYIREILSL TSYSRSYINA CVSTLSRRLN KTKCWTVALK TLILIQRLLG
101: EGDQAYEQEI FFATRRGTRL LNMSDFRDVS RSNSWDYSAF VRTYALYLDE RLDFRMQARH GKRGVYCVGG EADEEEQDQA AADLSTAIVV RSQPIAEMKT
201: EQIFIRIQHL QQLLDRFLAC RPTGNARNNR VVIVALYPIV KESFQIYYDV TEIMGILIER FMELDIPDSI KVYDIFCRVS KQFEELDQFY SWCKNMGIAR
301: SSEYPEIEKI TQKKLDLMDE FIRDKSALEH TKQSKSVKSE ADEDDDEART EEVNEEQEDM NAIKALPEPP PKEEDDVKPE EEAKEEVIIE KKQEEMGDLL
401: DLGNTNGGEA GQAGDSLALA LFDGPYASGS GSESGPGWEA FKDDSADWET ALVQTATNLS GQKSELGGGF DMLLLNGMYQ HGAVNAAVKT STAYGASGSA
501: SSMAFGSAGR PAATMLALPA PSTANGNAGN INSPVPMDPF AASLEVAPPA YVQMNDMEKK QRMLMEEQMM WDQYSRDGRQ GHMNLRQNQN QPYSYTPQY

Arabidopsis Description

Putative clathrin assembly protein At1g03050 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA65]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.