Factsheet for TraesCS1D01G266400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	plastid
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G266200.1	Wheat	cytosol	86.4	94.55
TraesCS1B01G277200.1	Wheat	cytosol	85.2	93.22
HORVU1Hr1G065590.1	Barley	cytosol	80.36	87.79
HORVU0Hr1G000720.3	Barley	cytosol	79.91	87.29
EES18258	Sorghum	cytosol	64.65	68.7
Zm00001d010228_P001	Maize	cytosol	63.14	67.97
Os05t0426100-00	Rice	cytosol	66.31	65.92
GSMUA_Achr10P...	Banana	mitochondrion	39.27	51.49
GSMUA_Achr6P18600_001	Banana	cytosol, mitochondrion	40.94	51.04
GSMUA_Achr11P...	Banana	cytosol	39.88	50.77
VIT_12s0055g00790.t01	Wine grape	cytosol, mitochondrion	43.66	49.66
KRH10492	Soybean	cytosol, mitochondrion	43.35	48.15
KRH43936	Soybean	cytosol, mitochondrion	43.05	48.06
CDY32494	Canola	mitochondrion	41.24	47.73
CDY15448	Canola	mitochondrion	40.94	47.38
Bra032561.1-P	Field mustard	mitochondrion	42.6	47.24
PGSC0003DMT400076552	Potato	cytosol, mitochondrion	41.39	47.08
AT1G03050.1	Thale cress	cytosol, mitochondrion	42.3	46.74
KRH58332	Soybean	mitochondrion	41.24	46.67
Solyc01g104870.2.1	Tomato	cytosol, mitochondrion	40.94	46.64
Bra030518.1-P	Field mustard	mitochondrion	41.24	46.27
Bra036250.1-P	Field mustard	mitochondrion	41.69	45.92
CDY21904	Canola	mitochondrion	41.54	45.91
CDY22070	Canola	mitochondrion	41.69	45.85
PGSC0003DMT400059062	Potato	cytosol	40.63	45.13
TraesCS4D01G208100.1	Wheat	cytosol, mitochondrion, plastid	38.07	45.0
AT4G02650.1	Thale cress	mitochondrion	41.39	44.84
CDY18145	Canola	cytosol	29.91	42.49
Bra033369.1-P	Field mustard	cytosol	30.06	42.43
CDX89917	Canola	cytosol	29.91	42.22
Solyc11g044860.1.1	Tomato	cytosol	31.87	42.2
TraesCS1D01G036500.1	Wheat	cytosol	36.56	39.16
CDY37444	Canola	nucleus	15.71	37.01
TraesCS7D01G140200.1	Wheat	cytosol	25.98	30.5
TraesCS1D01G375800.1	Wheat	cytosol, mitochondrion, plastid	25.08	29.38
TraesCS7D01G414100.1	Wheat	mitochondrion	24.77	28.87
TraesCS3D01G259000.2	Wheat	cytosol	24.02	28.24
TraesCS7D01G476900.2	Wheat	cytosol	23.87	27.29
CDX86691	Canola	cytosol, mitochondrion	41.09	26.9
TraesCS6D01G143700.1	Wheat	cytosol	23.72	26.75
TraesCS6D01G354100.2	Wheat	cytosol	23.72	26.52
TraesCS5D01G304500.1	Wheat	mitochondrion	13.14	19.68
TraesCS4D01G085400.1	Wheat	mitochondrion	11.63	19.49

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.6.2	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2	InterPro:ENTH
InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289
GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942
InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF12
SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	EnsemblPlantsGene:TraesCS1D01G266400	EnsemblPlants:TraesCS1D01G266400.1	TIGR:cd03564
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:362316459..362318551

Molecular Weight (calculated)

72249.8 Da

IEP (calculated)

5.192

GRAVY (calculated)

-0.366

Length

662 amino acids

Sequence
(BLAST)

001: MAPSFLGPPL RHPLPRARIS HASPSALRLR HHRLAPLPIA ATHHARKKLP IAPRPDVRTM APSKLRKALG AVKDKTSIGL AKVGGGSGFA SPELEVAIVK
101: ATKHDENFPA DERHIREIVS LTRDSRGSAG ACVAALSRRL GRTRSWDVAL KTLVIVHRLL AEGDPVFEQE LFYATRRGTR MLNMSDFCGR ASDDDAWDYS
201: AFVRTYAAYL DDRLEHRIQA RQGGPNRCKL LRDELYMSPG DRFSREGVDG SKREDGSKRE DAPADADAAK AVAIVPRETP TSEMSLEQLL AKVQQLQHLL
301: DRFIACRPVG AAKTNRVVTV SLYPMVKESV QLYCELTEVM AALMERFPDM ESADCERVTG VFCGLAKQIE DLDSFYSWCK DAYVCRQSDV PEVEVITQER
401: LELMDEFICD RRGTEYVQRL PPPSPEPSSP EPEVEEYDMS ATRALPAPAE PPAAVEQEQD ASETAHAEPE APLITTDVVD EEADFLNLKA DAMSGEEHGQ
501: QLALALFDGN PAGSAPTCDV FDPSSADWET ALVESASALA HQRAMLGGGL DMMALDGMYN HAAAANAQVF SGSASSVALR PPGAPMLALP APPGMCSAAP
601: GADPFAASTV VPPPTYVQMS DMQTKQQLLT EEQMVWQQYG KNGMQGQRPQ QLMPPGVYHR AS

Best Arabidopsis Sequence Match ( AT1G03050.1 )
(BLAST)

001: MGSSKFKRAI GAVKDQTSVG LAKVNGRSAS LSELDVAIVK ATRHEEFPAE EKYIREILSL TSYSRSYINA CVSTLSRRLN KTKCWTVALK TLILIQRLLG
101: EGDQAYEQEI FFATRRGTRL LNMSDFRDVS RSNSWDYSAF VRTYALYLDE RLDFRMQARH GKRGVYCVGG EADEEEQDQA AADLSTAIVV RSQPIAEMKT
201: EQIFIRIQHL QQLLDRFLAC RPTGNARNNR VVIVALYPIV KESFQIYYDV TEIMGILIER FMELDIPDSI KVYDIFCRVS KQFEELDQFY SWCKNMGIAR
301: SSEYPEIEKI TQKKLDLMDE FIRDKSALEH TKQSKSVKSE ADEDDDEART EEVNEEQEDM NAIKALPEPP PKEEDDVKPE EEAKEEVIIE KKQEEMGDLL
401: DLGNTNGGEA GQAGDSLALA LFDGPYASGS GSESGPGWEA FKDDSADWET ALVQTATNLS GQKSELGGGF DMLLLNGMYQ HGAVNAAVKT STAYGASGSA
501: SSMAFGSAGR PAATMLALPA PSTANGNAGN INSPVPMDPF AASLEVAPPA YVQMNDMEKK QRMLMEEQMM WDQYSRDGRQ GHMNLRQNQN QPYSYTPQY

Arabidopsis Description

Putative clathrin assembly protein At1g03050 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA65]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.