Factsheet for GSMUA_Achr11P09010_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P18600_001	Banana	cytosol, mitochondrion	76.92	75.33
GSMUA_Achr10P...	Banana	mitochondrion	67.88	69.9
VIT_12s0055g00790.t01	Wine grape	cytosol, mitochondrion	60.77	54.3
KRH10492	Soybean	cytosol, mitochondrion	60.38	52.68
KRH43936	Soybean	cytosol, mitochondrion	59.81	52.45
KRH58332	Soybean	mitochondrion	57.88	51.45
CDY15448	Canola	mitochondrion	54.81	49.83
AT1G03050.1	Thale cress	cytosol, mitochondrion	56.73	49.25
Solyc01g104870.2.1	Tomato	cytosol, mitochondrion	54.42	48.71
Bra030518.1-P	Field mustard	mitochondrion	54.81	48.31
PGSC0003DMT400076552	Potato	cytosol, mitochondrion	54.04	48.28
CDY32494	Canola	mitochondrion	52.69	47.9
CDY21904	Canola	mitochondrion	55.0	47.75
Bra036250.1-P	Field mustard	mitochondrion	54.81	47.42
CDY22070	Canola	mitochondrion	54.81	47.34
Bra032561.1-P	Field mustard	mitochondrion	54.23	47.24
AT4G02650.1	Thale cress	mitochondrion	55.19	46.97
PGSC0003DMT400059062	Potato	cytosol	52.88	46.14
HORVU0Hr1G000720.3	Barley	cytosol	53.27	45.71
HORVU1Hr1G065590.1	Barley	cytosol	53.08	45.54
GSMUA_Achr9P03950_001	Banana	cytosol, mitochondrion, plastid	45.96	45.35
EES18258	Sorghum	cytosol	53.85	44.94
TraesCS1A01G266200.1	Wheat	cytosol	51.35	44.13
TraesCS1B01G277200.1	Wheat	cytosol	51.15	43.97
Os01t0881100-01	Rice	mitochondrion	44.04	43.95
Zm00001d010228_P001	Maize	cytosol	51.35	43.41
GSMUA_Achr11P...	Banana	cytosol	37.5	42.76
Os05t0426100-00	Rice	cytosol	53.65	41.89
CDY18145	Canola	cytosol	37.5	41.85
Solyc11g044860.1.1	Tomato	cytosol	40.0	41.6
CDX89917	Canola	cytosol	37.31	41.36
Bra033369.1-P	Field mustard	cytosol	37.12	41.15
TraesCS1D01G266400.1	Wheat	mitochondrion	50.77	39.88
Zm00001d012220_P001	Maize	cytosol, mitochondrion, nucleus, plastid	41.73	39.1
KXG33814	Sorghum	cytosol, mitochondrion	41.73	38.14
GSMUA_Achr6P33420_001	Banana	cytosol, mitochondrion, plastid	45.0	37.03
GSMUA_Achr4P13420_001	Banana	cytosol	31.35	30.52
GSMUA_Achr7P04960_001	Banana	cytosol	31.54	29.82
GSMUA_Achr6P03060_001	Banana	cytosol	31.35	29.8
CDY37444	Canola	nucleus	15.96	29.54
GSMUA_Achr1P15690_001	Banana	cytosol	31.73	29.52
GSMUA_Achr9P21890_001	Banana	cytosol	31.73	29.46
Zm00001d047867_P001	Maize	cytosol	18.46	29.18
GSMUA_Achr5P23570_001	Banana	cytosol	30.58	29.17
GSMUA_Achr4P05920_001	Banana	cytosol	30.58	29.01
GSMUA_Achr4P20660_001	Banana	cytosol	30.96	28.9
GSMUA_Achr2P18700_001	Banana	cytosol	27.12	28.14
CDX86691	Canola	cytosol, mitochondrion	53.65	27.6
GSMUA_Achr3P05590_001	Banana	cytosol	28.65	27.29
GSMUA_Achr7P02300_001	Banana	plastid	25.58	26.34
GSMUA_Achr7P02390_001	Banana	cytosol	16.35	20.43
GSMUA_Achr7P18620_001	Banana	mitochondrion	14.81	19.85
GSMUA_Achr8P22890_001	Banana	mitochondrion	14.81	19.4
GSMUA_Achr3P20230_001	Banana	mitochondrion	11.54	18.13

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2	ncoils:Coil
InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543
GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268
EnsemblPlantsGene:GSMUA_Achr11G09010_001	EnsemblPlants:GSMUA_Achr11P09010_001	EnsemblPlants:GSMUA_Achr11T09010_001	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712
UniProt:M0RQN1	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF12	SMART:SM00273
SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI00029594CB	SEG:seg	:	:

Description

Putative clathrin assembly protein At1g03050 [Source:GMGC_GENE;Acc:GSMUA_Achr11G09010_001]

Coordinates

chr11:+:6937968..6939815

Molecular Weight (calculated)

58706.7 Da

IEP (calculated)

6.089

GRAVY (calculated)

-0.498

Length

520 amino acids

Sequence
(BLAST)

001: MAPSTIRKAL GAVKDQTSIG LAKVSNSTML SELDVAIVKA TRHDEFPAEE KHIREILSLT CYSRAYVGAC VSSLSRRLGK TQSWTVALKT LILIHRLLTE
101: GDPAYEQEIF FATRRGTRML NMSDFRDNSG ADAWDFSSFV RTYALYLDER LDYRMHGRRK RRGSRSNIND DEEEEAAAAA ATSSKATPVR EMTTDRIFAR
201: TRHLQHMLER FLACRPTGAA KHDRIVAVAL YPLVKESFQI YYDLTEIMNI FIDRFMDLEV PECVCIHEIF SRLAKQFDEL DLFYGWSKSA GVCRSSEYPE
301: VERISPKKLD VMDEFIRDKA ALAHAKEQRS LEADRDPPTT RTRRPRTTNP TVAEVKVDKE EEKEEEEVDL LNLKEDAMTG EEHGNMLALA LFDRHMSSDA
401: APKCEAFPNG DSSNWEMALV ETASNLSGQK ASLGAKPMLA LPAPAVDGAT YGGGGDPFAA SLMVPPPSYV QMSDMEKKQH LLTEEQRVWQ QYAKDGMQGQ
501: LALAKLQQQQ YQYHPGARMY

Best Arabidopsis Sequence Match ( AT1G03050.1 )
(BLAST)

001: MGSSKFKRAI GAVKDQTSVG LAKVNGRSAS LSELDVAIVK ATRHEEFPAE EKYIREILSL TSYSRSYINA CVSTLSRRLN KTKCWTVALK TLILIQRLLG
101: EGDQAYEQEI FFATRRGTRL LNMSDFRDVS RSNSWDYSAF VRTYALYLDE RLDFRMQARH GKRGVYCVGG EADEEEQDQA AADLSTAIVV RSQPIAEMKT
201: EQIFIRIQHL QQLLDRFLAC RPTGNARNNR VVIVALYPIV KESFQIYYDV TEIMGILIER FMELDIPDSI KVYDIFCRVS KQFEELDQFY SWCKNMGIAR
301: SSEYPEIEKI TQKKLDLMDE FIRDKSALEH TKQSKSVKSE ADEDDDEART EEVNEEQEDM NAIKALPEPP PKEEDDVKPE EEAKEEVIIE KKQEEMGDLL
401: DLGNTNGGEA GQAGDSLALA LFDGPYASGS GSESGPGWEA FKDDSADWET ALVQTATNLS GQKSELGGGF DMLLLNGMYQ HGAVNAAVKT STAYGASGSA
501: SSMAFGSAGR PAATMLALPA PSTANGNAGN INSPVPMDPF AASLEVAPPA YVQMNDMEKK QRMLMEEQMM WDQYSRDGRQ GHMNLRQNQN QPYSYTPQY

Arabidopsis Description

Putative clathrin assembly protein At1g03050 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA65]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.