Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89917 | Canola | cytosol | 98.07 | 97.44 |
| CDY37444 | Canola | nucleus | 49.14 | 81.49 |
| AT1G03050.1 | Thale cress | cytosol, mitochondrion | 88.63 | 68.95 |
| CDY15448 | Canola | mitochondrion | 84.12 | 68.53 |
| CDY32494 | Canola | mitochondrion | 83.48 | 68.01 |
| CDY22070 | Canola | mitochondrion | 69.31 | 53.65 |
| CDY21904 | Canola | mitochondrion | 68.67 | 53.42 |
| Solyc11g044860.1.1 | Tomato | cytosol | 52.36 | 48.8 |
| VIT_12s0055g00790.t01 | Wine grape | cytosol, mitochondrion | 58.37 | 46.74 |
| KRH43936 | Soybean | cytosol, mitochondrion | 57.3 | 45.03 |
| KRH10492 | Soybean | cytosol, mitochondrion | 56.22 | 43.96 |
| KRH58332 | Soybean | mitochondrion | 54.51 | 43.42 |
| Solyc01g104870.2.1 | Tomato | cytosol, mitochondrion | 53.0 | 42.51 |
| PGSC0003DMT400076552 | Potato | cytosol, mitochondrion | 52.58 | 42.1 |
| GSMUA_Achr6P18600_001 | Banana | cytosol, mitochondrion | 47.64 | 41.81 |
| PGSC0003DMT400059062 | Potato | cytosol | 52.15 | 40.77 |
| CDX86691 | Canola | cytosol, mitochondrion | 85.19 | 39.27 |
| GSMUA_Achr10P... | Banana | mitochondrion | 40.99 | 37.82 |
| GSMUA_Achr11P... | Banana | cytosol | 41.85 | 37.5 |
| CDX76760 | Canola | cytosol | 37.12 | 37.05 |
| CDX76977 | Canola | cytosol | 41.2 | 36.78 |
| CDY11530 | Canola | cytosol | 41.2 | 33.1 |
| CDY35361 | Canola | cytosol | 41.63 | 32.83 |
| CDX76976 | Canola | cytosol | 41.63 | 32.72 |
| HORVU1Hr1G065590.1 | Barley | cytosol | 42.27 | 32.51 |
| TraesCS1A01G266200.1 | Wheat | cytosol | 42.06 | 32.4 |
| HORVU0Hr1G000720.3 | Barley | cytosol | 42.06 | 32.34 |
| CDX68831 | Canola | cytosol | 40.99 | 32.32 |
| EES18258 | Sorghum | cytosol | 43.13 | 32.26 |
| TraesCS1B01G277200.1 | Wheat | cytosol | 41.85 | 32.23 |
| CDX75232 | Canola | cytosol | 40.77 | 32.04 |
| Zm00001d010228_P001 | Maize | cytosol | 41.2 | 31.22 |
| KXG33814 | Sorghum | cytosol, mitochondrion | 37.77 | 30.93 |
| Os05t0426100-00 | Rice | cytosol | 43.78 | 30.63 |
| Zm00001d047867_P001 | Maize | cytosol | 21.46 | 30.4 |
| Os01t0881100-01 | Rice | mitochondrion | 33.69 | 30.13 |
| Zm00001d012220_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 35.62 | 29.91 |
| TraesCS1D01G266400.1 | Wheat | mitochondrion | 42.49 | 29.91 |
| CDY41768 | Canola | cytosol, mitochondrion | 17.6 | 20.6 |
| CDY71126 | Canola | cytosol, mitochondrion | 18.45 | 20.19 |
| CDY04095 | Canola | cytosol | 24.68 | 20.14 |
| CDY12401 | Canola | cytosol, mitochondrion | 22.96 | 19.81 |
| CDY17459 | Canola | cytosol | 24.03 | 19.65 |
| CDY17660 | Canola | cytosol | 24.03 | 19.61 |
| CDY36239 | Canola | cytosol | 23.61 | 19.26 |
| CDY09433 | Canola | cytosol, mitochondrion | 23.82 | 19.24 |
| CDY48813 | Canola | cytosol | 24.03 | 19.21 |
| CDY52732 | Canola | cytosol | 24.03 | 19.15 |
| CDY38276 | Canola | cytosol | 24.25 | 19.09 |
| CDY42239 | Canola | cytosol | 13.73 | 18.99 |
| CDY18283 | Canola | cytosol, nucleus, peroxisome | 19.31 | 18.75 |
| CDX89382 | Canola | cytosol | 22.75 | 17.64 |
| CDY53396 | Canola | cytosol | 22.32 | 17.48 |
| CDX94400 | Canola | cytosol | 22.32 | 17.45 |
| CDY47927 | Canola | cytosol | 18.88 | 17.43 |
| CDY15531 | Canola | cytosol, golgi, nucleus | 22.53 | 17.21 |
| CDY01884 | Canola | mitochondrion | 12.23 | 15.97 |
| CDY45299 | Canola | mitochondrion | 23.18 | 15.7 |
| CDY53525 | Canola | cytosol, mitochondrion | 23.39 | 15.64 |
| CDX86594 | Canola | cytosol, golgi, nucleus | 21.46 | 15.38 |
| CDY12691 | Canola | mitochondrion | 12.02 | 15.38 |
| CDX81471 | Canola | mitochondrion | 12.02 | 15.22 |
| CDX96047 | Canola | mitochondrion | 11.59 | 14.96 |
| CDY64692 | Canola | mitochondrion | 11.8 | 14.51 |
| CDY03862 | Canola | mitochondrion | 11.8 | 14.44 |
| CDY60368 | Canola | mitochondrion | 10.94 | 13.49 |
| CDY57160 | Canola | mitochondrion | 10.52 | 12.96 |
| CDY45281 | Canola | cytosol | 9.44 | 12.83 |
| CDY41097 | Canola | cytosol | 9.44 | 12.79 |
| CDY50184 | Canola | mitochondrion | 9.23 | 11.68 |
| CDX93766 | Canola | mitochondrion | 9.23 | 11.59 |
Protein Annotations
| Gene3D:1.20.58.150 | Gene3D:1.25.40.90 | MapMan:22.1.6.2 | GO:A0A078FUI3 | UniProt:A0A078FUI3 | InterPro:ANTH_dom |
| EnsemblPlants:CDY18145 | ProteinID:CDY18145 | ProteinID:CDY18145.1 | InterPro:Clathrin_AP_dom2 | ncoils:Coil | InterPro:ENTH |
| InterPro:ENTH_VHS | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005543 | GO:GO:0005545 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008289 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0030136 | GO:GO:0030276 | GO:GO:0048268 | EnsemblPlantsGene:GSBRNA2T00002667001 |
| InterPro:IPR008942 | InterPro:IPR013809 | InterPro:IPR014712 | PFAM:PF07651 | PFscan:PS50942 | PANTHER:PTHR22951 |
| PANTHER:PTHR22951:SF12 | SUPFAM:SSF48464 | SUPFAM:SSF89009 | UniParc:UPI0004EF2E10 | SEG:seg | : |
Description
BnaC05g01680DBnaC05g01680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FUI3]
Coordinates
chrLK032083:+:56640..58587
Molecular Weight (calculated)
52147.0 Da
IEP (calculated)
4.203
GRAVY (calculated)
-0.576
Length
466 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDFRDVSRS NSWDYSAFVR TYALYLDERL DFRMQTRHGK RGVYCVGGGD AVEDEKDKPE ADLSTAIVVR SQPIAEMKTE KIFTRVQHLQ QLLDRFLACR
101: PTAGGARNNR VVIVALYPIV KESFQIYYDV TEMMGILIER FMELDIPDSI KVYDIFCRVS KQFEELDQFY SWCKNMGIAR SSEYPEIEKI TQKKLDLMDE
201: FIKDKSTLDQ TKESQSVEED DDERAEEEED MNAIKALPAP PPKEEEEEEE QPEEEVIIEK KQEEVGDLLD LVDINGGEAL EAGDSLALAL FDGPYASGSG
301: SETGPGWEAF NDDGADWETA LVQTATKLSG QKTELGGGFD MLLLNGMYQH GTVNAAVQTS TAYGASGSAS SMAFGSAGRP AATMLALPAP ATANGNSNGT
401: VPMDPFAASL EVAPPAYVQM NDMEKKQRML MEEQMMWDQY SREGRQGHMN LRQNQNKPSY SYTPQY
101: PTAGGARNNR VVIVALYPIV KESFQIYYDV TEMMGILIER FMELDIPDSI KVYDIFCRVS KQFEELDQFY SWCKNMGIAR SSEYPEIEKI TQKKLDLMDE
201: FIKDKSTLDQ TKESQSVEED DDERAEEEED MNAIKALPAP PPKEEEEEEE QPEEEVIIEK KQEEVGDLLD LVDINGGEAL EAGDSLALAL FDGPYASGSG
301: SETGPGWEAF NDDGADWETA LVQTATKLSG QKTELGGGFD MLLLNGMYQH GTVNAAVQTS TAYGASGSAS SMAFGSAGRP AATMLALPAP ATANGNSNGT
401: VPMDPFAASL EVAPPAYVQM NDMEKKQRML MEEQMMWDQY SREGRQGHMN LRQNQNKPSY SYTPQY
001: MGSSKFKRAI GAVKDQTSVG LAKVNGRSAS LSELDVAIVK ATRHEEFPAE EKYIREILSL TSYSRSYINA CVSTLSRRLN KTKCWTVALK TLILIQRLLG
101: EGDQAYEQEI FFATRRGTRL LNMSDFRDVS RSNSWDYSAF VRTYALYLDE RLDFRMQARH GKRGVYCVGG EADEEEQDQA AADLSTAIVV RSQPIAEMKT
201: EQIFIRIQHL QQLLDRFLAC RPTGNARNNR VVIVALYPIV KESFQIYYDV TEIMGILIER FMELDIPDSI KVYDIFCRVS KQFEELDQFY SWCKNMGIAR
301: SSEYPEIEKI TQKKLDLMDE FIRDKSALEH TKQSKSVKSE ADEDDDEART EEVNEEQEDM NAIKALPEPP PKEEDDVKPE EEAKEEVIIE KKQEEMGDLL
401: DLGNTNGGEA GQAGDSLALA LFDGPYASGS GSESGPGWEA FKDDSADWET ALVQTATNLS GQKSELGGGF DMLLLNGMYQ HGAVNAAVKT STAYGASGSA
501: SSMAFGSAGR PAATMLALPA PSTANGNAGN INSPVPMDPF AASLEVAPPA YVQMNDMEKK QRMLMEEQMM WDQYSRDGRQ GHMNLRQNQN QPYSYTPQY
101: EGDQAYEQEI FFATRRGTRL LNMSDFRDVS RSNSWDYSAF VRTYALYLDE RLDFRMQARH GKRGVYCVGG EADEEEQDQA AADLSTAIVV RSQPIAEMKT
201: EQIFIRIQHL QQLLDRFLAC RPTGNARNNR VVIVALYPIV KESFQIYYDV TEIMGILIER FMELDIPDSI KVYDIFCRVS KQFEELDQFY SWCKNMGIAR
301: SSEYPEIEKI TQKKLDLMDE FIRDKSALEH TKQSKSVKSE ADEDDDEART EEVNEEQEDM NAIKALPEPP PKEEDDVKPE EEAKEEVIIE KKQEEMGDLL
401: DLGNTNGGEA GQAGDSLALA LFDGPYASGS GSESGPGWEA FKDDSADWET ALVQTATNLS GQKSELGGGF DMLLLNGMYQ HGAVNAAVKT STAYGASGSA
501: SSMAFGSAGR PAATMLALPA PSTANGNAGN INSPVPMDPF AASLEVAPPA YVQMNDMEKK QRMLMEEQMM WDQYSRDGRQ GHMNLRQNQN QPYSYTPQY
Arabidopsis Description
Putative clathrin assembly protein At1g03050 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA65]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.