CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48813	Canola	cytosol	98.44	97.43
CDY36239	Canola	cytosol	91.51	92.47
CDY17660	Canola	cytosol	91.51	92.47
CDY17459	Canola	cytosol	89.77	90.88
CDY04095	Canola	cytosol	89.77	90.72
AT2G01600.1	Thale cress	cytosol, mitochondrion	85.96	86.87
Bra026647.1-P	Field mustard	cytosol	97.75	78.33
KRH42533	Soybean	cytosol	72.27	73.42
KRH58627	Soybean	nucleus	71.92	72.94
VIT_01s0011g05330.t01	Wine grape	cytosol, mitochondrion	69.84	71.08
KRH38239	Soybean	cytosol	67.24	70.04
Solyc04g007860.2.1	Tomato	cytosol, plastid	67.94	69.63
PGSC0003DMT400075923	Potato	cytosol	67.59	69.27
CDY42239	Canola	cytosol	38.99	66.77
GSMUA_Achr4P13420_001	Banana	cytosol	59.27	64.04
EES19899	Sorghum	cytosol, mitochondrion, plastid	62.56	64.01
Zm00001d038892_P001	Maize	mitochondrion	62.39	63.94
GSMUA_Achr9P21890_001	Banana	cytosol	61.35	63.21
Os05t0549000-01	Rice	plasma membrane	62.05	63.14
TraesCS1D01G375800.1	Wheat	cytosol, mitochondrion, plastid	61.35	62.65
Os01t0694900-01	Rice	cytosol	61.53	62.5
TraesCS1A01G369700.1	Wheat	cytosol, mitochondrion, plastid	61.18	62.48
TraesCS1B01G388800.1	Wheat	cytosol, mitochondrion, plastid	61.01	62.41
TraesCS3B01G292000.2	Wheat	cytosol, mitochondrion, plastid	59.97	61.57
TraesCS3A01G258900.1	Wheat	cytosol	59.45	61.36
EES01312	Sorghum	cytosol	59.79	61.28
TraesCS3D01G259000.2	Wheat	cytosol	59.45	60.92
CDY45299	Canola	mitochondrion	69.32	58.14
CDY53525	Canola	cytosol, mitochondrion	70.19	58.11
Zm00001d009452_P007	Maize	cytosol, mitochondrion, plastid	57.02	56.53
HORVU1Hr1G078340.3	Barley	plastid	61.18	55.77
CDY47927	Canola	cytosol	47.14	53.86
Zm00001d043773_P003	Maize	cytosol	57.89	53.27
CDY52732	Canola	cytosol	52.86	52.14
CDY41768	Canola	cytosol, mitochondrion	35.88	52.01
CDY38276	Canola	cytosol	53.03	51.69
CDY71126	Canola	cytosol, mitochondrion	37.61	50.94
CDX94400	Canola	cytosol	51.13	49.5
CDX89382	Canola	cytosol	51.3	49.25
CDY12401	Canola	cytosol, mitochondrion	43.67	46.67
CDX76976	Canola	cytosol	29.64	28.84
CDY35361	Canola	cytosol	29.46	28.76
CDY15448	Canola	mitochondrion	28.42	28.67
CDY11530	Canola	cytosol	28.77	28.62
CDY32494	Canola	mitochondrion	27.9	28.15
CDX68831	Canola	cytosol	28.42	27.75
CDX75232	Canola	cytosol	28.42	27.66
CDY22070	Canola	mitochondrion	28.25	27.08
CDY21904	Canola	mitochondrion	28.08	27.05
CDY64692	Canola	mitochondrion	16.29	24.8
CDY18283	Canola	cytosol, nucleus, peroxisome	20.62	24.79
CDY12691	Canola	mitochondrion	15.42	24.45
CDX89917	Canola	cytosol	19.76	24.31
CDX81471	Canola	mitochondrion	15.42	24.18
CDY03862	Canola	mitochondrion	15.77	23.88
CDY18145	Canola	cytosol	19.24	23.82
CDY45281	Canola	cytosol	13.86	23.32
CDY50184	Canola	mitochondrion	14.73	23.1
CDY60368	Canola	mitochondrion	15.08	23.02
CDY01884	Canola	mitochondrion	14.04	22.69
CDY41097	Canola	cytosol	13.52	22.67
CDX93766	Canola	mitochondrion	14.56	22.64
CDY57160	Canola	mitochondrion	14.73	22.49
CDX96047	Canola	mitochondrion	13.86	22.16
CDY15531	Canola	cytosol, golgi, nucleus	22.53	21.31
CDX76977	Canola	cytosol	19.24	21.26
CDY53396	Canola	cytosol	21.84	21.18
CDX86594	Canola	cytosol, golgi, nucleus	23.22	20.62
CDX76760	Canola	cytosol	16.64	20.56
CDY37444	Canola	nucleus	8.15	16.73
CDX86691	Canola	cytosol, mitochondrion	28.94	16.52

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.6.2	GO:A0A078FBV8	UniProt:A0A078FBV8	InterPro:ANTH_dom
EnsemblPlants:CDY09433	ProteinID:CDY09433	ProteinID:CDY09433.1	InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987
GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	EnsemblPlantsGene:GSBRNA2T00030933001	InterPro:IPR008942
InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF54
SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI0004EEC908	SEG:seg	:

Description

BnaA02g25770DBnaA02g25770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FBV8]

Coordinates

chrLK031995:-:917190..920433

Molecular Weight (calculated)

64110.1 Da

IEP (calculated)

4.860

GRAVY (calculated)

-0.483

Length

577 amino acids

Sequence
(BLAST)

001: MGTLQTWRKA YGALKDTTKV GLVRVNSDYA DLDVAIVKAT NHVECPPKDR HLRKIFAATA VTRARADVAY CIHALSRRLH KTRNWTVALK TLIVIHRLLR
101: EGDPTFREEL LNFSQRGRIL QLSNFKDDSS PIAWDCSAWV RTYALFLEER LECFRVLKYD TEAERLPKAT PGQDKGYSRT RDLDGEELLV QLPALQQLLY
201: RLIGCRPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII NLIDKFFEMP KHEAMSSFEI YKRAGQQTRS LSEFYEACKG LELARNFQFP VLREPPQSFL
301: STMEEYIKEA PRAVDAPAEP LLLTYRPDDG LPDEDPEPSH EEREVVLPSD DVVLVSEDTE PSPPPPPPSA STQSQNIIDT DDLLGLNSGG PDASAIENQN
401: ARALAIIPTD DNPATPRFGH ANDYDPSGWE LALVTTPSND ISAATDRQLG GGLDTLTLNS LYDDGAYIAS QRPVYGAPAP NPFEVHHDPF AASSNGIQTP
501: QQPAVNNPFG AYQPTYHHQE QQQLQLALPN PTANNNPFGD FGEFPVNPVS QQPNTSGFGD FAVNQPNNNP FHSTGLL

Best Arabidopsis Sequence Match ( AT2G01600.1 )
(BLAST)

001: MGTLQSWRKA YGALKDSTKV GLVRVNSEYA DLDVAIVKAT NHVECPPKDR HLRKIFAATS VTRARADVAY CIHALSRRLH KTRNWTVALK TLIVIHRLLR
101: EGDPTFREEL LNFSQRGRIL QLSNFKDDSS PIAWDCSAWV RTYALFLEER LECFRVLKYD TEAERLPKSN PGQDKGYSRT RDLDGEELLE QLPALQQLLY
201: RLIGCRPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII NLIDKFFEMA KHEAITSLEI YKRAGQQARS LSDFYEACKG LELARNFQFP VLREPPQSFL
301: TTMEEYIKEA PRVVDVPAEP LLLTYRPDDG LTTEDTEPSH EEREMLPSDD VVVVSEETEP SPPPPPSANA QNFIDTDDLW GLNTGAPDTS VIEDQNALAL
401: AIVSTDADPP TPHFGQPNNY DPTGWELALV TAPSSDISAS TERKLAGGLD TLTLSSLYDD GAYIASQRPV YGAPAPNPFA SHDPFASSNG TAPPPQQQAV
501: NNPFGAYQQT YQHQPQPTYQ HQSNPPTNNS NPFGDFGEFP VNPVSQQPNT SGYGDFSVNQ HNNPFRSTGL I

Arabidopsis Description

Putative clathrin assembly protein At2g01600 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBH2]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.