Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45281 | Canola | cytosol | 96.51 | 96.79 |
| Bra026195.1-P | Field mustard | cytosol | 97.09 | 93.82 |
| AT1G14686.1 | Thale cress | cytosol | 72.97 | 74.04 |
| CDY60368 | Canola | mitochondrion | 41.28 | 37.57 |
| CDY12691 | Canola | mitochondrion | 39.53 | 37.36 |
| CDY57160 | Canola | mitochondrion | 40.99 | 37.3 |
| CDX81471 | Canola | mitochondrion | 39.24 | 36.68 |
| CDY64692 | Canola | mitochondrion | 40.41 | 36.68 |
| CDY03862 | Canola | mitochondrion | 39.24 | 35.43 |
| CDY01884 | Canola | mitochondrion | 36.63 | 35.29 |
| VIT_01s0011g06370.t01 | Wine grape | mitochondrion | 38.37 | 34.29 |
| CDX96047 | Canola | mitochondrion | 35.76 | 34.07 |
| Solyc01g005070.2.1 | Tomato | mitochondrion | 39.24 | 33.92 |
| PGSC0003DMT400058608 | Potato | mitochondrion | 38.66 | 33.25 |
| PGSC0003DMT400075705 | Potato | mitochondrion | 37.79 | 33.16 |
| Solyc04g008350.1.1 | Tomato | mitochondrion | 37.79 | 33.08 |
| KRH49763 | Soybean | mitochondrion | 36.34 | 32.13 |
| KRG89239 | Soybean | cytosol, mitochondrion | 35.76 | 32.03 |
| KRH58584 | Soybean | mitochondrion | 36.92 | 31.83 |
| KRH42490 | Soybean | cytosol | 36.92 | 31.44 |
| EES13983 | Sorghum | mitochondrion | 34.59 | 29.6 |
| Zm00001d049990_P001 | Maize | mitochondrion | 32.56 | 28.87 |
| EER96828 | Sorghum | mitochondrion | 33.14 | 28.36 |
| Os08t0467300-01 | Rice | mitochondrion | 31.98 | 27.78 |
| Zm00001d005869_P001 | Maize | mitochondrion | 31.69 | 27.39 |
| GSMUA_Achr7P18620_001 | Banana | mitochondrion | 30.81 | 27.32 |
| TraesCS5B01G296700.1 | Wheat | mitochondrion | 28.78 | 25.92 |
| TraesCS5A01G297400.1 | Wheat | mitochondrion | 28.2 | 25.73 |
| GSMUA_Achr7P02390_001 | Banana | cytosol | 30.23 | 25.0 |
| GSMUA_Achr8P22890_001 | Banana | mitochondrion | 28.78 | 24.94 |
| GSMUA_Achr3P20230_001 | Banana | mitochondrion | 22.97 | 23.87 |
| HORVU7Hr1G089710.1 | Barley | mitochondrion | 12.21 | 23.73 |
| Zm00001d031760_P001 | Maize | mitochondrion | 33.43 | 23.37 |
| HORVU5Hr1G078270.1 | Barley | cytosol | 28.78 | 22.45 |
| TraesCS5D01G304500.1 | Wheat | mitochondrion | 28.2 | 21.95 |
| CDY42239 | Canola | cytosol | 19.19 | 19.58 |
| CDY41768 | Canola | cytosol, mitochondrion | 19.48 | 16.83 |
| CDY71126 | Canola | cytosol, mitochondrion | 19.48 | 15.73 |
| CDY50184 | Canola | mitochondrion | 16.57 | 15.49 |
| CDX93766 | Canola | mitochondrion | 16.28 | 15.09 |
| CDY47927 | Canola | cytosol | 21.8 | 14.85 |
| CDY18283 | Canola | cytosol, nucleus, peroxisome | 20.35 | 14.58 |
| CDY35361 | Canola | cytosol | 24.13 | 14.04 |
| CDX76976 | Canola | cytosol | 24.13 | 14.0 |
| CDY17660 | Canola | cytosol | 22.97 | 13.84 |
| CDY48813 | Canola | cytosol | 23.26 | 13.72 |
| CDY17459 | Canola | cytosol | 22.67 | 13.68 |
| CDY36239 | Canola | cytosol | 22.67 | 13.66 |
| CDY11530 | Canola | cytosol | 22.97 | 13.62 |
| CDX68831 | Canola | cytosol | 23.26 | 13.54 |
| CDY09433 | Canola | cytosol, mitochondrion | 22.67 | 13.52 |
| CDX75232 | Canola | cytosol | 23.26 | 13.49 |
| CDY04095 | Canola | cytosol | 22.09 | 13.31 |
| CDY15448 | Canola | mitochondrion | 22.09 | 13.29 |
| CDY32494 | Canola | mitochondrion | 22.09 | 13.29 |
| CDY15531 | Canola | cytosol, golgi, nucleus | 23.55 | 13.28 |
| CDY21904 | Canola | mitochondrion | 22.97 | 13.19 |
| CDY22070 | Canola | mitochondrion | 22.97 | 13.12 |
| CDY52732 | Canola | cytosol | 22.09 | 12.99 |
| CDY12401 | Canola | cytosol, mitochondrion | 20.35 | 12.96 |
| CDY38276 | Canola | cytosol | 22.09 | 12.84 |
| CDX86594 | Canola | cytosol, golgi, nucleus | 23.26 | 12.31 |
| CDX89382 | Canola | cytosol | 21.22 | 12.15 |
| CDX94400 | Canola | cytosol | 20.93 | 12.08 |
| CDY53396 | Canola | cytosol | 20.64 | 11.93 |
| CDY45299 | Canola | mitochondrion | 22.38 | 11.19 |
| CDY53525 | Canola | cytosol, mitochondrion | 22.38 | 11.05 |
| CDX89917 | Canola | cytosol | 13.08 | 9.59 |
| CDY18145 | Canola | cytosol | 12.79 | 9.44 |
| CDX76760 | Canola | cytosol | 11.92 | 8.78 |
| CDX76977 | Canola | cytosol | 12.21 | 8.05 |
| CDX86691 | Canola | cytosol, mitochondrion | 22.97 | 7.81 |
| CDY37444 | Canola | nucleus | 1.74 | 2.14 |
Protein Annotations
| Gene3D:1.20.58.150 | Gene3D:1.25.40.90 | MapMan:35.1 | GO:A0A078HTB6 | UniProt:A0A078HTB6 | InterPro:ANTH_dom |
| EnsemblPlants:CDY41097 | ProteinID:CDY41097 | ProteinID:CDY41097.1 | InterPro:Clathrin_AP_dom2 | InterPro:ENTH | InterPro:ENTH_VHS |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005543 | GO:GO:0005545 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008289 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0030136 | GO:GO:0030276 | GO:GO:0048268 | EnsemblPlantsGene:GSBRNA2T00072429001 | InterPro:IPR008942 |
| InterPro:IPR013809 | InterPro:IPR014712 | PFAM:PF07651 | PFscan:PS50942 | PANTHER:PTHR22951 | PANTHER:PTHR22951:SF19 |
| SUPFAM:SSF48464 | SUPFAM:SSF89009 | UniParc:UPI0004EE3268 | SEG:seg | : | : |
Description
BnaC05g10880DBnaC05g10880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HTB6]
Coordinates
chrLK032490:-:82658..83725
Molecular Weight (calculated)
38722.5 Da
IEP (calculated)
4.700
GRAVY (calculated)
-0.141
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MNIWKRASVA LKDGTSLIAA DDLLKAAVVK ATNHDEYCID PENALFIYRH VRATPASLKP LISAISSRVT RTRSWVVALK GLMLMHGFFL SKTTAAESIG
101: RLPFDLSAFG REGNSRTSSS SRSGGFNLFV RAYFAFLDRR SILFHDGNRH RYDEESSVMI RLVIIRKMQV IIDSLVRIKP IGESVRIPVI NEAMENVISE
201: ILEIYGWICR RIAEVLPNVN SKSGKRQADV ALKIVAKSMT QGEELVKYFV FCRDLGVANA QEIPNFVRIP VDDVIHLHEI VWTDKEEEQG GEEEPDEEEG
301: EEEMERELIP VIDDLIKLDD DEAMEDDEPP TAPPVVDVPD LISL
101: RLPFDLSAFG REGNSRTSSS SRSGGFNLFV RAYFAFLDRR SILFHDGNRH RYDEESSVMI RLVIIRKMQV IIDSLVRIKP IGESVRIPVI NEAMENVISE
201: ILEIYGWICR RIAEVLPNVN SKSGKRQADV ALKIVAKSMT QGEELVKYFV FCRDLGVANA QEIPNFVRIP VDDVIHLHEI VWTDKEEEQG GEEEPDEEEG
301: EEEMERELIP VIDDLIKLDD DEAMEDDEPP TAPPVVDVPD LISL
001: MKLWKRAAVV LKDGPSLIAA DDILTAAVVK ATSHDELSID TESAQFIYRH VLSSPSSLKP LVSLISSRVK RTRSWAVALK GLMLMHGFFL CKSTVAESIG
101: RLPFDLSSFG EGNSRIMSKS GGFNLFVRAY FAFLDRRSIL FHDGNRHRYN EESSVLIRLV IIRKMQIIVD SLIRIKPIGE NMMIPVINEA MENVVSEIME
201: IYGWICRRIA EVLPNVHSKI GKTEADLALK IVAKSMKQGG ELKKYFEFCK DLGVSNAQEI PNFVRIPEAD VIHLDELVRT AMESSEESAE RTEIAEEEEE
301: EEEEIETKLS DLITLDHNEE APASPPRVVV VDIPDLISF
101: RLPFDLSSFG EGNSRIMSKS GGFNLFVRAY FAFLDRRSIL FHDGNRHRYN EESSVLIRLV IIRKMQIIVD SLIRIKPIGE NMMIPVINEA MENVVSEIME
201: IYGWICRRIA EVLPNVHSKI GKTEADLALK IVAKSMKQGG ELKKYFEFCK DLGVSNAQEI PNFVRIPEAD VIHLDELVRT AMESSEESAE RTEIAEEEEE
301: EEEEIETKLS DLITLDHNEE APASPPRVVV VDIPDLISF
Arabidopsis Description
Putative clathrin assembly protein At1g14686 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQW4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.