Factsheet for Solyc01g005070.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058608	Potato	mitochondrion	95.23	94.75
Solyc04g008350.1.1	Tomato	mitochondrion	57.04	57.76
VIT_01s0011g06370.t01	Wine grape	mitochondrion	49.75	51.43
AT1G25240.2	Thale cress	mitochondrion	44.22	46.68
CDY60368	Canola	mitochondrion	44.22	46.56
Bra024772.1-P	Field mustard	mitochondrion	43.97	46.42
KRH58584	Soybean	mitochondrion	46.48	46.37
CDY57160	Canola	mitochondrion	43.72	46.03
CDY03862	Canola	mitochondrion	43.97	45.93
CDY64692	Canola	mitochondrion	43.72	45.91
KRH42490	Soybean	cytosol	46.48	45.79
Bra012491.1-P	Field mustard	mitochondrion	43.47	45.77
Bra033960.1-P	Field mustard	mitochondrion	39.7	43.41
CDY12691	Canola	mitochondrion	39.7	43.41
AT1G68110.1	Thale cress	mitochondrion	41.21	43.27
CDX81471	Canola	mitochondrion	39.95	43.21
KRG89239	Soybean	cytosol, mitochondrion	41.46	42.97
CDY01884	Canola	mitochondrion	38.44	42.86
CDX96047	Canola	mitochondrion	38.69	42.66
KRH49763	Soybean	mitochondrion	41.46	42.42
Bra004282.1-P	Field mustard	mitochondrion	38.44	42.38
AT1G14686.1	Thale cress	cytosol	34.67	40.71
CDY45281	Canola	cytosol	33.92	39.36
CDY41097	Canola	cytosol	33.92	39.24
Bra026195.1-P	Field mustard	cytosol	33.92	37.92
GSMUA_Achr7P18620_001	Banana	mitochondrion	35.43	36.34
AT2G01920.1	Thale cress	mitochondrion	28.14	35.9
Zm00001d049990_P001	Maize	mitochondrion	33.92	34.79
EES13983	Sorghum	mitochondrion	34.67	34.33
Os08t0467300-01	Rice	mitochondrion	33.92	34.09
GSMUA_Achr8P22890_001	Banana	mitochondrion	32.91	33.0
GSMUA_Achr7P02390_001	Banana	cytosol	32.91	31.49
EER96828	Sorghum	mitochondrion	31.41	31.09
Zm00001d005869_P001	Maize	mitochondrion	30.65	30.65
TraesCS5A01G297400.1	Wheat	mitochondrion	28.64	30.24
TraesCS5B01G296700.1	Wheat	mitochondrion	28.39	29.58
GSMUA_Achr3P20230_001	Banana	mitochondrion	24.12	29.0
Zm00001d031760_P001	Maize	mitochondrion	33.67	27.24
HORVU5Hr1G078270.1	Barley	cytosol	28.64	25.85
TraesCS5D01G304500.1	Wheat	mitochondrion	28.64	25.79
Solyc12g017440.1.1	Tomato	cytosol	18.84	25.08
HORVU7Hr1G089710.1	Barley	mitochondrion	10.05	22.6
Solyc01g005170.1.1	Tomato	cytosol, mitochondrion, plastid	18.59	17.87
Solyc08g059660.1.1	Tomato	cytosol	24.87	15.57
Solyc01g104870.2.1	Tomato	cytosol, mitochondrion	22.36	15.32
Solyc07g007820.2.1	Tomato	cytosol	21.61	15.28
Solyc04g007860.2.1	Tomato	cytosol, plastid	21.61	15.28
Solyc02g043810.2.1	Tomato	cytosol	21.86	15.05
Solyc07g008060.1.1	Tomato	cytosol	22.61	14.66
Solyc06g011450.1.1	Tomato	cytosol	22.36	14.5
Solyc12g010530.1.1	Tomato	cytosol	19.85	13.3
Solyc12g006000.1.1	Tomato	cytosol	23.62	12.91
Solyc07g049380.1.1	Tomato	cytosol	23.62	12.65
Solyc11g044860.1.1	Tomato	cytosol	14.32	11.4
Solyc12g017430.1.1	Tomato	nucleus	1.76	3.3

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2	InterPro:ENTH
InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289
GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942
InterPro:IPR013809	InterPro:IPR014712	UniProt:K4AS74	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951
PANTHER:PTHR22951:SF19	SUPFAM:SSF48464	SUPFAM:SSF89009	EnsemblPlantsGene:Solyc01g005070.2	EnsemblPlants:Solyc01g005070.2.1	UniParc:UPI00027618D3
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1:+:65457..66982

Molecular Weight (calculated)

45981.1 Da

IEP (calculated)

6.281

GRAVY (calculated)

-0.167

Length

398 amino acids

Sequence
(BLAST)

001: MRLWRKAFGL VKDHKSLWLA SISRRTSFRN PEMEAAVIKA TSHDELTIDM KNVDRVYKWL RLSPTHLKSL IWSISLRMEK TKSWVVAIKG LMLMHGVYSS
101: KIPAIQRIGR LPFDLSNFKD GYSDPYKIWG INEFIRAYFT YLDQKSSLLF MNLQERRNLQ NLEHINDDDN NNNNVVVMVE GRYSMIQDLV LLQKLQYLLD
201: MLLEIRPLCG NAVVPLVLEA MDCVMIEVFD VYSRICNGIA RILLRIDSAG KVEASMALGI VQKAMMQGEE LSVYFELCQS IGVKNAAEFP TIEQIPYEDI
301: KELEEIINGV SEKESRMLPY QHEAKGIVVV REKNGDQNIE KESKLRTVIT DKWEKFDEDL MQNDGVKIAP YAINPFEICT YNVPIKRTPD LPDLISFL

Best Arabidopsis Sequence Match ( AT1G25240.2 )
(BLAST)

001: MMKLWKRASG ALKDRKTLFT IGFSRKTSFR NPDLDSAIIH ATSHDDSSVD YHNAHRVYKW IRSSPANLKP LVHALSSRVN RTRSWIVALK ALMLVHGVLC
101: CKVTSLQEIR RLPFDLSDFS DGHSRPSKTW GFNAFIRAYF SFLDQYSFFL SDQIRRRHKK PQLDSVNQEL ERIEKLQSLL HMLLQIRPMA DNMKKTLILE
201: AMDCVVIEIF DIYGRICSAI AKLLIKIHPA AGKAEAVIAL KIVKKATSQG EDLALYFEFC KEFGVSNAHD IPKFVTIPEE DIKAIEKVIN GVEEEEVKKK
301: EDEVEEEKSI ILVERPELQT IITDKWEIFE DDFCFTCKDI KETDQHRKFN MDPSPLPLIV IDEPVYFTHT LPDLITF

Arabidopsis Description

ENTH/VHS/GAT family protein [Source:TAIR;Acc:AT1G25240]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.