CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12691	Canola	mitochondrion	97.01	98.08
CDY01884	Canola	mitochondrion	76.36	78.71
CDX96047	Canola	mitochondrion	76.36	77.84
AT1G68110.1	Thale cress	mitochondrion	76.36	74.14
CDY64692	Canola	mitochondrion	67.12	65.17
CDY03862	Canola	mitochondrion	65.76	63.52
CDY60368	Canola	mitochondrion	64.4	62.7
CDY57160	Canola	mitochondrion	64.13	62.43
VIT_01s0011g06370.t01	Wine grape	mitochondrion	45.11	43.12
Solyc01g005070.2.1	Tomato	mitochondrion	43.21	39.95
PGSC0003DMT400058608	Potato	mitochondrion	43.21	39.75
CDY45281	Canola	cytosol	36.96	39.65
CDY41097	Canola	cytosol	36.68	39.24
PGSC0003DMT400075705	Potato	mitochondrion	41.03	38.52
KRH58584	Soybean	mitochondrion	41.3	38.1
Solyc04g008350.1.1	Tomato	mitochondrion	40.49	37.91
KRH42490	Soybean	cytosol	41.58	37.87
KRG89239	Soybean	cytosol, mitochondrion	38.32	36.72
EES13983	Sorghum	mitochondrion	38.86	35.57
Os08t0467300-01	Rice	mitochondrion	37.77	35.1
KRH49763	Soybean	mitochondrion	36.96	34.96
GSMUA_Achr7P18620_001	Banana	mitochondrion	35.87	34.02
Zm00001d049990_P001	Maize	mitochondrion	35.87	34.02
EER96828	Sorghum	mitochondrion	36.68	33.58
Zm00001d005869_P001	Maize	mitochondrion	35.87	33.17
TraesCS5A01G297400.1	Wheat	mitochondrion	32.61	31.83
TraesCS5B01G296700.1	Wheat	mitochondrion	32.88	31.68
GSMUA_Achr8P22890_001	Banana	mitochondrion	33.42	30.98
GSMUA_Achr7P02390_001	Banana	cytosol	34.78	30.77
GSMUA_Achr3P20230_001	Banana	mitochondrion	25.54	28.4
HORVU5Hr1G078270.1	Barley	cytosol	32.61	27.21
TraesCS5D01G304500.1	Wheat	mitochondrion	32.34	26.92
Zm00001d031760_P001	Maize	mitochondrion	35.87	26.83
HORVU7Hr1G089710.1	Barley	mitochondrion	12.77	26.55
CDY42239	Canola	cytosol	20.65	22.55
CDY41768	Canola	cytosol, mitochondrion	20.11	18.59
CDY50184	Canola	mitochondrion	18.21	18.21
CDX93766	Canola	mitochondrion	18.21	18.06
CDY71126	Canola	cytosol, mitochondrion	20.65	17.84
CDY47927	Canola	cytosol	23.64	17.23
CDY32494	Canola	mitochondrion	24.73	15.91
CDY48813	Canola	cytosol	25.0	15.78
CDY04095	Canola	cytosol	24.46	15.76
CDY36239	Canola	cytosol	24.46	15.76
CDY17660	Canola	cytosol	24.46	15.76
CDX68831	Canola	cytosol	25.27	15.74
CDX75232	Canola	cytosol	25.27	15.68
CDY18283	Canola	cytosol, nucleus, peroxisome	20.38	15.62
CDY35361	Canola	cytosol	25.0	15.57
CDY15448	Canola	mitochondrion	24.18	15.56
CDY52732	Canola	cytosol	24.73	15.56
CDY11530	Canola	cytosol	24.46	15.52
CDX76976	Canola	cytosol	25.0	15.51
CDY17459	Canola	cytosol	23.91	15.44
CDY09433	Canola	cytosol, mitochondrion	24.18	15.42
CDY38276	Canola	cytosol	24.73	15.37
CDY12401	Canola	cytosol, mitochondrion	22.55	15.37
CDY15531	Canola	cytosol, golgi, nucleus	24.73	14.92
CDY21904	Canola	mitochondrion	24.18	14.86
CDY22070	Canola	mitochondrion	24.18	14.78
CDX89382	Canola	cytosol	23.1	14.14
CDX94400	Canola	cytosol	22.83	14.09
CDY45299	Canola	mitochondrion	25.82	13.81
CDX86594	Canola	cytosol, golgi, nucleus	24.18	13.69
CDY53525	Canola	cytosol, mitochondrion	25.54	13.49
CDY53396	Canola	cytosol	20.92	12.94
CDX89917	Canola	cytosol	15.76	12.37
CDY18145	Canola	cytosol	15.22	12.02
CDX76977	Canola	cytosol	14.13	9.96
CDX76760	Canola	cytosol	12.5	9.85
CDX86691	Canola	cytosol, mitochondrion	25.27	9.2
CDY37444	Canola	nucleus	3.8	4.98

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	GO:A0A078CWE0	InterPro:ANTH_dom	EnsemblPlants:CDX81471
ProteinID:CDX81471	ProteinID:CDX81471.1	InterPro:Clathrin_AP_dom2	ncoils:Coil	InterPro:ENTH	InterPro:ENTH_VHS
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987
GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	EnsemblPlantsGene:GSBRNA2T00135080001	InterPro:IPR008942
InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF19
SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI0004EF4270	SEG:seg	:

Description

BnaC02g17750D

Coordinates

chrLK031825:+:19146..20322

Molecular Weight (calculated)

41715.3 Da

IEP (calculated)

7.462

GRAVY (calculated)

-0.180

Length

368 amino acids

Sequence
(BLAST)

001: MKLWKRAAAA IKDQKSLLAV GFSRRASYRN TDLEAAIIKA TSHDDSSVDY SNAQRVYKWI KASPLNLKTL VHALSSRVNH TRSWIVALKS LMLLHGVISC
101: KVPSVVGEIR RLPFDLSDFS DGHSSLSRTW GFNIFVRAYF AFLNSYSSFT ADQISRTRAN LRSDKVDSVK QQLDRIQKLQ SLLDLILQIR PIADNMKRAL
201: ILEAMDCIVL ESINIYGRIC SGIIKILPAA GKTDAARSLK IVNKATSQGE DLAMYFEFCK GFGVSNARDT PQFVTIPMAE VEAMEKMVKS VEKDEQKQEE
301: EVVEEEEKAI VLLEKPRLQT IITDKWETFE DDEYCFSEKA IQEYHQDPLP LVVSNQPVCY TMPDLITF

Best Arabidopsis Sequence Match ( AT1G68110.1 )
(BLAST)

001: MKLWKRAAAA IKDRKSLLAV GFSRRNSSYR NADLEAAIIK ATSHDDSSVD YSNAHRVYKW IRSSPLNLKT LVYAISSRVN HTRSWIVALK SLMLLHGVLC
101: CKVPSVVGEF RRLPFDLSDF SDGHSCLSKT WGFNVFVRTY FAFLHHYSSF LSDQIHRLRG NNRRSLEKTS DSVIQELERI QKLQSLLDMI LQIRPVADNM
201: KKTLILEAMD CLVIESINIY GRICGAVMKV LPLAGKSEAA TVLKIVNKTT SQGEDLIVYF EFCKGFGVSN AREIPQFVRI PEEEVEAIEK MIDTVQEKPK
301: LEKDEEKEDE KAMVVLEQPK KLQTIITDKW EIFEDDYRCF DRKDKWEIFE DEYHQNHLPL ITMNQPVYIT YTMPDLITF

Arabidopsis Description

Putative clathrin assembly protein At1g68110 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9X5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.