Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04095 | Canola | cytosol | 95.79 | 95.62 |
| CDY36239 | Canola | cytosol | 91.58 | 91.42 |
| CDY17660 | Canola | cytosol | 91.23 | 91.07 |
| CDY09433 | Canola | cytosol, mitochondrion | 90.88 | 89.77 |
| CDY48813 | Canola | cytosol | 91.58 | 89.54 |
| AT2G01600.1 | Thale cress | cytosol, mitochondrion | 87.37 | 87.22 |
| KRH42533 | Soybean | cytosol | 72.28 | 72.54 |
| KRH58627 | Soybean | nucleus | 72.11 | 72.23 |
| VIT_01s0011g05330.t01 | Wine grape | cytosol, mitochondrion | 69.82 | 70.19 |
| Solyc04g007860.2.1 | Tomato | cytosol, plastid | 68.6 | 69.45 |
| KRH38239 | Soybean | cytosol | 67.37 | 69.31 |
| PGSC0003DMT400075923 | Potato | cytosol | 68.42 | 69.27 |
| CDY42239 | Canola | cytosol | 39.47 | 66.77 |
| GSMUA_Achr4P13420_001 | Banana | cytosol | 60.7 | 64.79 |
| GSMUA_Achr9P21890_001 | Banana | cytosol | 62.11 | 63.21 |
| EES19899 | Sorghum | cytosol, mitochondrion, plastid | 61.75 | 62.41 |
| Zm00001d038892_P001 | Maize | mitochondrion | 61.58 | 62.34 |
| Os05t0549000-01 | Rice | plasma membrane | 61.75 | 62.08 |
| Os01t0694900-01 | Rice | cytosol | 61.4 | 61.62 |
| TraesCS1A01G369700.1 | Wheat | cytosol, mitochondrion, plastid | 61.05 | 61.59 |
| TraesCS1D01G375800.1 | Wheat | cytosol, mitochondrion, plastid | 60.88 | 61.42 |
| TraesCS1B01G388800.1 | Wheat | cytosol, mitochondrion, plastid | 60.7 | 61.35 |
| TraesCS3B01G292000.2 | Wheat | cytosol, mitochondrion, plastid | 59.65 | 60.5 |
| TraesCS3A01G258900.1 | Wheat | cytosol | 59.12 | 60.29 |
| EES01312 | Sorghum | cytosol | 59.3 | 60.04 |
| TraesCS3D01G259000.2 | Wheat | cytosol | 59.3 | 60.04 |
| CDY45299 | Canola | mitochondrion | 69.82 | 57.85 |
| CDY53525 | Canola | cytosol, mitochondrion | 70.53 | 57.68 |
| Zm00001d009452_P007 | Maize | cytosol, mitochondrion, plastid | 56.67 | 55.5 |
| HORVU1Hr1G078340.3 | Barley | plastid | 60.7 | 54.66 |
| CDY47927 | Canola | cytosol | 47.89 | 54.06 |
| CDY41768 | Canola | cytosol, mitochondrion | 36.67 | 52.51 |
| Zm00001d043773_P003 | Maize | cytosol | 57.72 | 52.47 |
| CDY52732 | Canola | cytosol | 52.98 | 51.62 |
| CDY71126 | Canola | cytosol, mitochondrion | 38.42 | 51.41 |
| CDY38276 | Canola | cytosol | 52.98 | 51.01 |
| CDX94400 | Canola | cytosol | 52.28 | 50.0 |
| CDX89382 | Canola | cytosol | 52.46 | 49.75 |
| CDY12401 | Canola | cytosol, mitochondrion | 44.56 | 47.04 |
| CDY15448 | Canola | mitochondrion | 28.95 | 28.85 |
| CDX76976 | Canola | cytosol | 29.3 | 28.16 |
| CDY11530 | Canola | cytosol | 28.6 | 28.1 |
| CDY35361 | Canola | cytosol | 29.12 | 28.09 |
| CDY32494 | Canola | mitochondrion | 28.07 | 27.97 |
| CDX68831 | Canola | cytosol | 28.42 | 27.41 |
| CDY22070 | Canola | mitochondrion | 28.95 | 27.41 |
| CDY21904 | Canola | mitochondrion | 28.77 | 27.38 |
| CDX75232 | Canola | cytosol | 28.42 | 27.32 |
| CDY64692 | Canola | mitochondrion | 16.49 | 24.8 |
| CDY12691 | Canola | mitochondrion | 15.44 | 24.18 |
| CDY03862 | Canola | mitochondrion | 16.14 | 24.15 |
| CDX89917 | Canola | cytosol | 19.82 | 24.09 |
| CDY18145 | Canola | cytosol | 19.65 | 24.03 |
| CDY18283 | Canola | cytosol, nucleus, peroxisome | 20.18 | 23.96 |
| CDX81471 | Canola | mitochondrion | 15.44 | 23.91 |
| CDY50184 | Canola | mitochondrion | 15.09 | 23.37 |
| CDY45281 | Canola | cytosol | 14.04 | 23.32 |
| CDY60368 | Canola | mitochondrion | 15.26 | 23.02 |
| CDX93766 | Canola | mitochondrion | 14.91 | 22.91 |
| CDY01884 | Canola | mitochondrion | 14.21 | 22.69 |
| CDY41097 | Canola | cytosol | 13.68 | 22.67 |
| CDY57160 | Canola | mitochondrion | 14.91 | 22.49 |
| CDX96047 | Canola | mitochondrion | 14.04 | 22.16 |
| CDY15531 | Canola | cytosol, golgi, nucleus | 22.11 | 20.66 |
| CDY53396 | Canola | cytosol | 21.4 | 20.5 |
| CDX76977 | Canola | cytosol | 18.77 | 20.5 |
| CDX86594 | Canola | cytosol, golgi, nucleus | 22.98 | 20.15 |
| CDX76760 | Canola | cytosol | 16.32 | 19.91 |
| CDY37444 | Canola | nucleus | 8.42 | 17.08 |
| CDX86691 | Canola | cytosol, mitochondrion | 29.3 | 16.52 |
Protein Annotations
| Gene3D:1.20.58.150 | Gene3D:1.25.40.90 | MapMan:22.1.6.2 | GO:A0A078FWD8 | UniProt:A0A078FWD8 | InterPro:ANTH_dom |
| EnsemblPlants:CDY17459 | ProteinID:CDY17459 | ProteinID:CDY17459.1 | InterPro:Clathrin_AP_dom2 | InterPro:ENTH | InterPro:ENTH_VHS |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005543 | GO:GO:0005545 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008289 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0030136 | GO:GO:0030276 | GO:GO:0048268 | EnsemblPlantsGene:GSBRNA2T00095627001 | InterPro:IPR008942 |
| InterPro:IPR013809 | InterPro:IPR014712 | PFAM:PF07651 | PFscan:PS50942 | PANTHER:PTHR22951 | PANTHER:PTHR22951:SF54 |
| SMART:SM00273 | SUPFAM:SSF48464 | SUPFAM:SSF89009 | UniParc:UPI0004EF13C1 | SEG:seg | : |
Description
BnaC09g20780DBnaC09g20780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FWD8]
Coordinates
chrLK032073:-:629033..632401
Molecular Weight (calculated)
63038.9 Da
IEP (calculated)
4.761
GRAVY (calculated)
-0.403
Length
570 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTLQSWRKA YGALKDTTKV GLVRVNSDYA DLDVAIVKAT NHVECPPKDR HLRKIFAATA VTRARADVAY CIHALTRRLH KTRNWTVALK TLIVIHRLLR
101: EGDPTFREEL LNFSQRGRIL QISNFKDDSG PIAWDCSAWV RTYALFLEER LECFRVLRYD TEAEPLTKAT PGQDKGYSRT RDLDGEELLL QLPALQQLLY
201: RLIGCKPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII NLIDKFFEMP KHEAVTSLEI YKRAGQQARS LSEFYEACKG LELARNFQFP VLREPPQSFL
301: TTMEEYIKEA PRAVDAPAEP LLLTYRPDDG LEDTEPSHEE REVVLPSDDV VLVSEETEHS PPPPPSATTQ SQDIIDTDDL LGLNTAAPDA SAIEDQNALA
401: LAIISTDGGN ASTPRSFQAN DYDPTGWELA LVTTPSNDIS AATDRQLAGG LDTLTLNSLY DDGAYIASQR PVYGAPAPNP FEVHDPFATS NGTLPPQQPA
501: VNNPFGAYQP TYGQHQLQLV GAPNAQANNN SSNPFGDFGE FPVSQQPNTS GFGDFAVNQH NNPFRSTGLI
101: EGDPTFREEL LNFSQRGRIL QISNFKDDSG PIAWDCSAWV RTYALFLEER LECFRVLRYD TEAEPLTKAT PGQDKGYSRT RDLDGEELLL QLPALQQLLY
201: RLIGCKPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII NLIDKFFEMP KHEAVTSLEI YKRAGQQARS LSEFYEACKG LELARNFQFP VLREPPQSFL
301: TTMEEYIKEA PRAVDAPAEP LLLTYRPDDG LEDTEPSHEE REVVLPSDDV VLVSEETEHS PPPPPSATTQ SQDIIDTDDL LGLNTAAPDA SAIEDQNALA
401: LAIISTDGGN ASTPRSFQAN DYDPTGWELA LVTTPSNDIS AATDRQLAGG LDTLTLNSLY DDGAYIASQR PVYGAPAPNP FEVHDPFATS NGTLPPQQPA
501: VNNPFGAYQP TYGQHQLQLV GAPNAQANNN SSNPFGDFGE FPVSQQPNTS GFGDFAVNQH NNPFRSTGLI
001: MGTLQSWRKA YGALKDSTKV GLVRVNSEYA DLDVAIVKAT NHVECPPKDR HLRKIFAATS VTRARADVAY CIHALSRRLH KTRNWTVALK TLIVIHRLLR
101: EGDPTFREEL LNFSQRGRIL QLSNFKDDSS PIAWDCSAWV RTYALFLEER LECFRVLKYD TEAERLPKSN PGQDKGYSRT RDLDGEELLE QLPALQQLLY
201: RLIGCRPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII NLIDKFFEMA KHEAITSLEI YKRAGQQARS LSDFYEACKG LELARNFQFP VLREPPQSFL
301: TTMEEYIKEA PRVVDVPAEP LLLTYRPDDG LTTEDTEPSH EEREMLPSDD VVVVSEETEP SPPPPPSANA QNFIDTDDLW GLNTGAPDTS VIEDQNALAL
401: AIVSTDADPP TPHFGQPNNY DPTGWELALV TAPSSDISAS TERKLAGGLD TLTLSSLYDD GAYIASQRPV YGAPAPNPFA SHDPFASSNG TAPPPQQQAV
501: NNPFGAYQQT YQHQPQPTYQ HQSNPPTNNS NPFGDFGEFP VNPVSQQPNT SGYGDFSVNQ HNNPFRSTGL I
101: EGDPTFREEL LNFSQRGRIL QLSNFKDDSS PIAWDCSAWV RTYALFLEER LECFRVLKYD TEAERLPKSN PGQDKGYSRT RDLDGEELLE QLPALQQLLY
201: RLIGCRPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII NLIDKFFEMA KHEAITSLEI YKRAGQQARS LSDFYEACKG LELARNFQFP VLREPPQSFL
301: TTMEEYIKEA PRVVDVPAEP LLLTYRPDDG LTTEDTEPSH EEREMLPSDD VVVVSEETEP SPPPPPSANA QNFIDTDDLW GLNTGAPDTS VIEDQNALAL
401: AIVSTDADPP TPHFGQPNNY DPTGWELALV TAPSSDISAS TERKLAGGLD TLTLSSLYDD GAYIASQRPV YGAPAPNPFA SHDPFASSNG TAPPPQQQAV
501: NNPFGAYQQT YQHQPQPTYQ HQSNPPTNNS NPFGDFGEFP VNPVSQQPNT SGYGDFSVNQ HNNPFRSTGL I
Arabidopsis Description
Putative clathrin assembly protein At2g01600 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBH2]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.