CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032561.1-P	Field mustard	mitochondrion	99.3	95.14
CDY37444	Canola	nucleus	43.71	88.97
CDY15448	Canola	mitochondrion	85.49	85.49
AT1G03050.1	Thale cress	cytosol, mitochondrion	87.94	83.97
CDY18145	Canola	cytosol	68.01	83.48
CDX89917	Canola	cytosol	68.18	83.16
CDY22070	Canola	mitochondrion	69.93	66.45
CDY21904	Canola	mitochondrion	69.23	66.11
VIT_12s0055g00790.t01	Wine grape	cytosol, mitochondrion	62.24	61.17
KRH43936	Soybean	cytosol, mitochondrion	61.19	59.02
KRH10492	Soybean	cytosol, mitochondrion	60.49	58.05
Solyc01g104870.2.1	Tomato	cytosol, mitochondrion	58.74	57.83
KRH58332	Soybean	mitochondrion	58.74	57.44
PGSC0003DMT400076552	Potato	cytosol, mitochondrion	58.39	57.39
GSMUA_Achr6P18600_001	Banana	cytosol, mitochondrion	52.1	56.12
PGSC0003DMT400059062	Potato	cytosol	55.24	53.02
GSMUA_Achr11P...	Banana	cytosol	47.9	52.69
GSMUA_Achr10P...	Banana	mitochondrion	46.33	52.48
Solyc11g044860.1.1	Tomato	cytosol	44.76	51.2
CDX86691	Canola	cytosol, mitochondrion	86.36	48.86
HORVU1Hr1G065590.1	Barley	cytosol	47.55	44.88
TraesCS1A01G266200.1	Wheat	cytosol	47.38	44.79
TraesCS1B01G277200.1	Wheat	cytosol	47.2	44.63
HORVU0Hr1G000720.3	Barley	cytosol	47.2	44.55
CDY35361	Canola	cytosol	45.98	44.5
EES18258	Sorghum	cytosol	48.43	44.46
CDX76976	Canola	cytosol	45.98	44.35
CDY11530	Canola	cytosol	44.76	44.14
Zm00001d010228_P001	Maize	cytosol	46.85	43.58
CDX68831	Canola	cytosol	44.23	42.81
CDX75232	Canola	cytosol	44.23	42.66
Os05t0426100-00	Rice	cytosol	49.48	42.49
Os01t0881100-01	Rice	mitochondrion	38.64	42.42
TraesCS1D01G266400.1	Wheat	mitochondrion	47.73	41.24
KXG33814	Sorghum	cytosol, mitochondrion	40.21	40.42
Zm00001d012220_P001	Maize	cytosol, mitochondrion, nucleus, plastid	38.81	40.0
CDX76760	Canola	cytosol	29.9	36.62
CDX76977	Canola	cytosol	33.04	36.21
CDY42239	Canola	cytosol	19.93	33.83
CDY41768	Canola	cytosol, mitochondrion	23.43	33.67
CDY71126	Canola	cytosol, mitochondrion	24.3	32.63
Zm00001d047867_P001	Maize	cytosol	17.31	30.09
CDY12401	Canola	cytosol, mitochondrion	27.97	29.63
CDY04095	Canola	cytosol	28.67	28.72
CDY17660	Canola	cytosol	28.32	28.37
CDY18283	Canola	cytosol, nucleus, peroxisome	23.6	28.12
CDY17459	Canola	cytosol	27.97	28.07
CDY36239	Canola	cytosol	27.97	28.02
CDY09433	Canola	cytosol, mitochondrion	28.15	27.9
CDY48813	Canola	cytosol	28.15	27.62
CDY52732	Canola	cytosol	27.8	27.18
CDY38276	Canola	cytosol	27.97	27.03
CDY47927	Canola	cytosol	23.43	26.53
CDY15531	Canola	cytosol, golgi, nucleus	27.27	25.57
CDY53396	Canola	cytosol	26.22	25.21
CDX89382	Canola	cytosol	26.22	24.96
CDX94400	Canola	cytosol	25.87	24.83
CDX81471	Canola	mitochondrion	15.91	24.73
CDY12691	Canola	mitochondrion	15.56	24.45
CDY01884	Canola	mitochondrion	15.04	24.09
CDY64692	Canola	mitochondrion	15.73	23.75
CDY50184	Canola	mitochondrion	15.04	23.37
CDX93766	Canola	mitochondrion	15.04	23.18
CDY03862	Canola	mitochondrion	15.38	23.1
CDX96047	Canola	mitochondrion	14.51	22.99
CDX86594	Canola	cytosol, golgi, nucleus	26.05	22.92
CDY45299	Canola	mitochondrion	27.27	22.67
CDY53525	Canola	cytosol, mitochondrion	27.62	22.67
CDY60368	Canola	mitochondrion	14.86	22.49
CDY57160	Canola	mitochondrion	14.69	22.22
CDY41097	Canola	cytosol	13.29	22.09
CDY45281	Canola	cytosol	13.11	21.87

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	GO:A0A078H518	UniProt:A0A078H518	InterPro:ANTH_dom
EnsemblPlants:CDY32494	ProteinID:CDY32494	ProteinID:CDY32494.1	InterPro:Clathrin_AP_dom2	ncoils:Coil	InterPro:ENTH
InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289
GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	EnsemblPlantsGene:GSBRNA2T00052472001
InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951
PANTHER:PTHR22951:SF12	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI0004EE08CE	SEG:seg

Description

BnaA09g51020DBnaA09g51020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H518]

Coordinates

chrLK032295:+:230195..232661

Molecular Weight (calculated)

64568.0 Da

IEP (calculated)

4.506

GRAVY (calculated)

-0.549

Length

572 amino acids

Sequence
(BLAST)

001: MSSSKLKRAI GAVKDQTSVG LAKVNGRSAS LSELDVAIVK ATRHEEYPAE EKYIREILSL TSYSRNYINA CVNTLSRRLN KTKCWTVALK TLILIQRLLG
101: EGDRAYEQEI FFATRRGTRL LNMSDFRDVS RSNSWDYSAF VRTYALYLDD RLDLRMQARH GKRGVYCVGG DTVDDKQDKP EADLSKAIVV RSQPTAEMKT
201: EEIFTRVQHL QQLLDRFLAC RPAGSARNNR VVIVALYPIV KESFQIYYDV TEIMGVLIER FMELEIPDSI KVYDIFCRVS KQFEELDQFY SWCKNMGIAR
301: SSEYPEIEKI TQKKLELMDE FIRDKTALEE TNNSKSVNEE DDDEAREEEV NEEQEEDMNA IKALPAPPPK EDEEEKTEEE AEEPVIIEEE KQEEVGDLLD
401: LVDISSESGP GWEAFKDDGA DWETALVQSA TNLSGQKTEL GGGFDMLLLN GMYQHGTVNA AVQNSTAYGA SGSASSMAFG SAGRPAATML ALPAPATANG
501: SSNGPVVPMD PFAASLVVAP PAYVQMNEME KKQRMLMEEQ IMWEQFSREG RQGHMNIRQN QNQPNYSYTP QY

Best Arabidopsis Sequence Match ( AT1G03050.1 )
(BLAST)

001: MGSSKFKRAI GAVKDQTSVG LAKVNGRSAS LSELDVAIVK ATRHEEFPAE EKYIREILSL TSYSRSYINA CVSTLSRRLN KTKCWTVALK TLILIQRLLG
101: EGDQAYEQEI FFATRRGTRL LNMSDFRDVS RSNSWDYSAF VRTYALYLDE RLDFRMQARH GKRGVYCVGG EADEEEQDQA AADLSTAIVV RSQPIAEMKT
201: EQIFIRIQHL QQLLDRFLAC RPTGNARNNR VVIVALYPIV KESFQIYYDV TEIMGILIER FMELDIPDSI KVYDIFCRVS KQFEELDQFY SWCKNMGIAR
301: SSEYPEIEKI TQKKLDLMDE FIRDKSALEH TKQSKSVKSE ADEDDDEART EEVNEEQEDM NAIKALPEPP PKEEDDVKPE EEAKEEVIIE KKQEEMGDLL
401: DLGNTNGGEA GQAGDSLALA LFDGPYASGS GSESGPGWEA FKDDSADWET ALVQTATNLS GQKSELGGGF DMLLLNGMYQ HGAVNAAVKT STAYGASGSA
501: SSMAFGSAGR PAATMLALPA PSTANGNAGN INSPVPMDPF AASLEVAPPA YVQMNDMEKK QRMLMEEQMM WDQYSRDGRQ GHMNLRQNQN QPYSYTPQY

Arabidopsis Description

Putative clathrin assembly protein At1g03050 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA65]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.