Factsheet for Os05t0426100-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G065590.1	Barley	cytosol	65.47	71.95
HORVU0Hr1G000720.3	Barley	cytosol	64.71	71.12
TraesCS1B01G277200.1	Wheat	cytosol	64.41	70.91
TraesCS1A01G266200.1	Wheat	cytosol	64.26	70.74
EES18258	Sorghum	cytosol	65.92	70.47
Zm00001d010228_P001	Maize	cytosol	64.26	69.59
TraesCS1D01G266400.1	Wheat	mitochondrion	65.92	66.31
GSMUA_Achr6P18600_001	Banana	cytosol, mitochondrion	44.44	55.74
GSMUA_Achr10P...	Banana	mitochondrion	40.84	53.86
GSMUA_Achr11P...	Banana	cytosol	41.89	53.65
VIT_12s0055g00790.t01	Wine grape	cytosol, mitochondrion	45.8	52.41
KRH43936	Soybean	cytosol, mitochondrion	45.05	50.59
PGSC0003DMT400076552	Potato	cytosol, mitochondrion	43.84	50.17
KRH10492	Soybean	cytosol, mitochondrion	44.89	50.17
Solyc01g104870.2.1	Tomato	cytosol, mitochondrion	43.39	49.74
CDY15448	Canola	mitochondrion	42.64	49.65
CDY32494	Canola	mitochondrion	42.49	49.48
KRH58332	Soybean	mitochondrion	43.24	49.23
Os01t0881100-01	Rice	mitochondrion	38.29	48.94
Bra032561.1-P	Field mustard	mitochondrion	43.84	48.91
AT1G03050.1	Thale cress	cytosol, mitochondrion	43.69	48.58
Bra030518.1-P	Field mustard	mitochondrion	42.94	48.47
Bra036250.1-P	Field mustard	mitochondrion	43.54	48.25
CDY22070	Canola	mitochondrion	43.39	48.01
PGSC0003DMT400059062	Potato	cytosol	42.94	47.99
CDY21904	Canola	mitochondrion	43.09	47.91
AT4G02650.1	Thale cress	mitochondrion	43.09	46.97
Solyc11g044860.1.1	Tomato	cytosol	34.68	46.2
CDY18145	Canola	cytosol	30.63	43.78
Bra033369.1-P	Field mustard	cytosol	30.63	43.5
CDX89917	Canola	cytosol	30.63	43.5
Os05t0112101-01	Rice	plasma membrane	36.64	42.0
Os03t0275500-01	Rice	plasma membrane	40.84	41.78
Os06t0661400-01	Rice	cytosol	15.17	40.4
CDY37444	Canola	nucleus	16.22	38.43
Os06t0175500-01	Rice	plasma membrane	26.13	30.53
Os05t0549000-01	Rice	plasma membrane	25.83	30.34
Os06t0699800-00	Rice	cytosol	19.82	30.07
Os01t0694900-01	Rice	cytosol	25.23	29.58
Os02t0803300-01	Rice	cytosol	24.62	28.82
Os02t0175700-01	Rice	plasma membrane	24.92	28.47
CDX86691	Canola	cytosol, mitochondrion	42.49	27.99
Os08t0467300-01	Rice	mitochondrion	13.51	22.73
Os11t0244600-01	Rice	cytosol	11.71	19.75

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.6.2	EntrezGene:9270756	ProteinID:AAV25008.1	InterPro:ANTH_dom
ProteinID:BAS94113.1	InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136
GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	EnsemblPlantsGene:Os05g0426100
EnsemblPlants:Os05t0426100-00	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF12	UniProt:Q60EC1
SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI000044D461	RefSeq:XP_015639253.1	SEG:seg

Description

Similar to predicted protein. (Os05t0426100-00)

Coordinates

chr5:+:20877789..20879887

Molecular Weight (calculated)

72356.5 Da

IEP (calculated)

5.698

GRAVY (calculated)

-0.379

Length

666 amino acids

Sequence
(BLAST)

001: MCQEVKRDLS HTVHGVHPPP QSAGDLSAAR NPRGAHFNHR RLHHPPIRLK HRRDGEQPAN VVAMPPSKLR KAIGAVKDQT SIGLAKVGSG GAAASELDVA
101: IVKATRHSES FPADERHVRE VIALTLHSRA YVGACVASLS RRLGRTRSWA VALKTLALVH RLLADGDQAF EQEVFYATRR GTRMLNMSDF CDHSRTDAWD
201: FSAFVRTYAA YLDDRLEYRM QAKHGGAARP GQPLREQLYA SPGNRFNYDD FIMRDDEADK AVALVARETP TSEMTLEQLL AKAQQLQHLL DRFIACRPVG
301: AAKTNRVVSV SLYPLVKESV QLYCELTEVM AALVEQFPEM EADDCERVHA VFCGLAKQLD ELEALYTWCK DAYVCRQSDV PEVELITQKK LELMDEFVRD
401: RRAAAAQSPE PPRREASPVV EDDVSATKAL PAPEEPVAAA QEEQNAGETV PAEPEAPPLI ADGDADFLNL KGDAMSGEEH GRQLALALFD GNPAGSAPAP
501: DAFDPSSTDW ETALVQSASA LAHQRAELGG GLSMLVLDGM YSQAAAASTA ANAQAFSGSA SSVAMRPPGA PMLALPAPPG TSGASGDPFA ASMAVAPPAY
601: VQMSDMETKQ HQLVEEQMVW QQYGKNGMSG QGALAMLEQQ RPPQQQMQMQ MLPNGGYNYA GYHRSS

Best Arabidopsis Sequence Match ( AT1G03050.1 )
(BLAST)

001: MGSSKFKRAI GAVKDQTSVG LAKVNGRSAS LSELDVAIVK ATRHEEFPAE EKYIREILSL TSYSRSYINA CVSTLSRRLN KTKCWTVALK TLILIQRLLG
101: EGDQAYEQEI FFATRRGTRL LNMSDFRDVS RSNSWDYSAF VRTYALYLDE RLDFRMQARH GKRGVYCVGG EADEEEQDQA AADLSTAIVV RSQPIAEMKT
201: EQIFIRIQHL QQLLDRFLAC RPTGNARNNR VVIVALYPIV KESFQIYYDV TEIMGILIER FMELDIPDSI KVYDIFCRVS KQFEELDQFY SWCKNMGIAR
301: SSEYPEIEKI TQKKLDLMDE FIRDKSALEH TKQSKSVKSE ADEDDDEART EEVNEEQEDM NAIKALPEPP PKEEDDVKPE EEAKEEVIIE KKQEEMGDLL
401: DLGNTNGGEA GQAGDSLALA LFDGPYASGS GSESGPGWEA FKDDSADWET ALVQTATNLS GQKSELGGGF DMLLLNGMYQ HGAVNAAVKT STAYGASGSA
501: SSMAFGSAGR PAATMLALPA PSTANGNAGN INSPVPMDPF AASLEVAPPA YVQMNDMEKK QRMLMEEQMM WDQYSRDGRQ GHMNLRQNQN QPYSYTPQY

Arabidopsis Description

Putative clathrin assembly protein At1g03050 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA65]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.