Factsheet for TraesCS1B01G277200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G266200.1	Wheat	cytosol	93.72	93.72
HORVU1Hr1G065590.1	Barley	cytosol	87.77	87.62
HORVU0Hr1G000720.3	Barley	cytosol	87.27	87.13
TraesCS1D01G266400.1	Wheat	mitochondrion	93.22	85.2
EES18258	Sorghum	cytosol	71.07	69.02
Zm00001d010228_P001	Maize	cytosol	69.42	68.29
Os05t0426100-00	Rice	cytosol	70.91	64.41
GSMUA_Achr10P...	Banana	mitochondrion	42.98	51.49
GSMUA_Achr11P...	Banana	cytosol	43.97	51.15
GSMUA_Achr6P18600_001	Banana	cytosol, mitochondrion	44.46	50.66
VIT_12s0055g00790.t01	Wine grape	cytosol, mitochondrion	47.27	49.14
KRH10492	Soybean	cytosol, mitochondrion	47.6	48.32
KRH43936	Soybean	cytosol, mitochondrion	47.27	48.23
CDY32494	Canola	mitochondrion	44.63	47.2
PGSC0003DMT400076552	Potato	cytosol, mitochondrion	45.29	47.08
CDY15448	Canola	mitochondrion	44.3	46.85
Solyc01g104870.2.1	Tomato	cytosol, mitochondrion	44.79	46.64
Bra032561.1-P	Field mustard	mitochondrion	45.95	46.57
KRH58332	Soybean	mitochondrion	44.79	46.32
AT1G03050.1	Thale cress	cytosol, mitochondrion	45.45	45.91
Bra030518.1-P	Field mustard	mitochondrion	44.63	45.76
Bra036250.1-P	Field mustard	mitochondrion	44.96	45.26
CDY21904	Canola	mitochondrion	44.79	45.24
CDY22070	Canola	mitochondrion	44.96	45.18
PGSC0003DMT400059062	Potato	cytosol	44.46	45.13
AT4G02650.1	Thale cress	mitochondrion	44.63	44.19
TraesCS4B01G207200.1	Wheat	cytosol, mitochondrion, plastid	45.45	43.1
Solyc11g044860.1.1	Tomato	cytosol	34.88	42.2
CDY18145	Canola	cytosol	32.23	41.85
Bra033369.1-P	Field mustard	cytosol	32.4	41.79
CDX89917	Canola	cytosol	32.23	41.58
TraesCS1B01G044800.1	Wheat	cytosol	39.34	38.51
CDY37444	Canola	nucleus	16.86	36.3
TraesCS7B01G430700.2	Wheat	cytosol	7.6	32.17
TraesCS7B01G040500.1	Wheat	cytosol	28.26	30.32
TraesCS1B01G388800.1	Wheat	cytosol, mitochondrion, plastid	26.61	28.55
TraesCS7B01G322300.1	Wheat	mitochondrion	26.12	27.96
TraesCS3B01G292000.2	Wheat	cytosol, mitochondrion, plastid	25.62	27.58
TraesCS7B01G393800.2	Wheat	cytosol	25.29	26.84
CDX86691	Canola	cytosol, mitochondrion	44.46	26.61
TraesCS6B01G407500.2	Wheat	cytosol	25.62	26.23
TraesCS6B01G181800.1	Wheat	cytosol	24.96	26.17
TraesCS5B01G296700.1	Wheat	mitochondrion	13.72	21.73
TraesCS4B01G088300.1	Wheat	mitochondrion	12.23	18.73

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.6.2	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2	InterPro:ENTH
InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289
GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942
InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF12
SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	EnsemblPlantsGene:TraesCS1B01G277200	EnsemblPlants:TraesCS1B01G277200.1	TIGR:cd03564
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:484882681..484884797

Molecular Weight (calculated)

65830.9 Da

IEP (calculated)

4.740

GRAVY (calculated)

-0.375

Length

605 amino acids

Sequence
(BLAST)

001: MAPSKLRKAL GAVKDKTSIG LAKVGGGSGF ASPELEVAIV KATKHDEKSP ADERRIREIV SLTRDSRGSA GACVAALSRR LGRTRSWDVA LKTLVIVRRL
101: LAEGDPVFEQ ELFYATRRGT RMLNMSDFCG RASDDDAWDF SAFVRTYAAY LDDRLEHRIQ ARQGGPNRCK LLRDELYMSP GNRFSNEGGN GSKREDAAAD
201: ADAAKAEAIV PRETPTSEMT LEQLLAKVQQ LQHLLDRFIA CRPVGAAKTN RVVSVSLYPL VKESVQLYCE LTEVMAALME QFPDMESADC ERVTGVFCGL
301: AKQIEELDSF YAWCKDAYVC RQSDVPEVEL ITQERLELMD EFVCDRRGAE YVRRLPPPSP EPSSPEPEVE EHDMSATRAL PAPAEPPAAV EQEHDASETA
401: HAEPEAPLIT TDVVNEEADF LNLKADAISG EEHGQQLARA LFDGHPAGSA PTCDVFDPSS ADWETALVES ASALANQRAM LGGGLDMMAL DGMYNHAAAA
501: NAQAFSGSAS SVALRPPGAP MLALPAPPGM CRAAPGADPF AASTVVPPPT YVQMSDMQKK QQLLTEEQMV WQQYGKNTMQ GQGGLAMREQ RPQQVMPPGV
601: YHRAS

Best Arabidopsis Sequence Match ( AT1G03050.1 )
(BLAST)

001: MGSSKFKRAI GAVKDQTSVG LAKVNGRSAS LSELDVAIVK ATRHEEFPAE EKYIREILSL TSYSRSYINA CVSTLSRRLN KTKCWTVALK TLILIQRLLG
101: EGDQAYEQEI FFATRRGTRL LNMSDFRDVS RSNSWDYSAF VRTYALYLDE RLDFRMQARH GKRGVYCVGG EADEEEQDQA AADLSTAIVV RSQPIAEMKT
201: EQIFIRIQHL QQLLDRFLAC RPTGNARNNR VVIVALYPIV KESFQIYYDV TEIMGILIER FMELDIPDSI KVYDIFCRVS KQFEELDQFY SWCKNMGIAR
301: SSEYPEIEKI TQKKLDLMDE FIRDKSALEH TKQSKSVKSE ADEDDDEART EEVNEEQEDM NAIKALPEPP PKEEDDVKPE EEAKEEVIIE KKQEEMGDLL
401: DLGNTNGGEA GQAGDSLALA LFDGPYASGS GSESGPGWEA FKDDSADWET ALVQTATNLS GQKSELGGGF DMLLLNGMYQ HGAVNAAVKT STAYGASGSA
501: SSMAFGSAGR PAATMLALPA PSTANGNAGN INSPVPMDPF AASLEVAPPA YVQMNDMEKK QRMLMEEQMM WDQYSRDGRQ GHMNLRQNQN QPYSYTPQY

Arabidopsis Description

Putative clathrin assembly protein At1g03050 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA65]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.