Factsheet for TraesCS7B01G040500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G138400.1	Wheat	cytosol	99.47	99.47
HORVU7Hr1G028590.1	Barley	cytosol	99.47	99.29
TraesCS7D01G140200.1	Wheat	cytosol	99.11	99.11
Zm00001d037484_P002	Maize	cytosol, mitochondrion	83.33	85.3
KXG19435	Sorghum	cytosol, mitochondrion	85.28	85.28
Os06t0175500-01	Rice	plasma membrane	83.16	82.28
Zm00001d045154_P002	Maize	mitochondrion	83.87	79.1
GSMUA_Achr6P03060_001	Banana	cytosol	69.15	71.3
GSMUA_Achr5P23570_001	Banana	cytosol	67.73	70.09
VIT_11s0016g05900.t01	Wine grape	cytosol	61.88	68.7
Solyc07g007820.2.1	Tomato	cytosol	67.91	68.03
KRH20163	Soybean	cytosol	65.6	67.77
KRH03643	Soybean	mitochondrion	65.78	67.7
CDY41768	Canola	cytosol, mitochondrion	46.81	66.33
CDY71126	Canola	cytosol, mitochondrion	50.0	66.2
PGSC0003DMT400017184	Potato	cytosol	48.58	63.57
AT5G35200.2	Thale cress	cytosol	59.93	62.13
CDY12401	Canola	cytosol, mitochondrion	59.4	62.04
Bra038937.1-P	Field mustard	mitochondrion	60.11	61.64
TraesCS6B01G407500.2	Wheat	cytosol	62.77	59.9
TraesCS1B01G388800.1	Wheat	cytosol, mitochondrion, plastid	48.4	48.4
TraesCS3B01G292000.2	Wheat	cytosol, mitochondrion, plastid	46.81	46.98
TraesCS7B01G322300.1	Wheat	mitochondrion	46.1	46.02
TraesCS6B01G181800.1	Wheat	cytosol	46.1	45.06
TraesCS7B01G393800.2	Wheat	cytosol	43.44	42.98
TraesCS7B01G430700.2	Wheat	cytosol	10.46	41.26
TraesCS4B01G207200.1	Wheat	cytosol, mitochondrion, plastid	32.98	29.15
TraesCS1B01G277200.1	Wheat	cytosol	30.32	28.26
TraesCS1B01G044800.1	Wheat	cytosol	27.3	24.92
TraesCS5B01G296700.1	Wheat	mitochondrion	13.12	19.37
TraesCS4B01G088300.1	Wheat	mitochondrion	12.23	17.47

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2	InterPro:ENTH
InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289
GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942
InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF32
SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	EnsemblPlantsGene:TraesCS7B01G040500	EnsemblPlants:TraesCS7B01G040500.1	TIGR:cd03564
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:40353139..40358696

Molecular Weight (calculated)

62257.9 Da

IEP (calculated)

5.384

GRAVY (calculated)

-0.377

Length

564 amino acids

Sequence
(BLAST)

001: MAGGGTQQSL RKYLGALKDT TTVSLAKVNS DYKELDIAIV KATNHSERPS REKYIREIFL SISAARPRAD VAYCIHALAR RLSKTRNWAV ALKTLIVIHR
101: ALREVDPTFR EELINYGRSR SHMLNMAYFK DDSSSGAWDY SAWVRTYASY LEERLECFRV LKYDVESDPP RTRDLDTVGV LDHLPPLQQL LFRLLACQPQ
201: GASSYNVIIQ HALSMVALES VKIYTAISDG TINLVDKFFE MQRNDAVRAL DIYKRATNQS KRLSEFYEVC KTIHVARGEK FLKIEQPPAS FMQTMEEYVR
301: DAPAMKDKAI LAIEYNKEPE EEVKPTSPPP VSEPEVEQEP EPEPEPEPVK EEAPAAEPTD LLGLNETHPA VAEIDERNAL ALAIVPIDDV PKAAPAFENG
401: VAGWELALVT APSSNETAVA SGKKLAGGLD LLTLDSLYED ANRRASQPAS YNPWETTGAA PAPMMQQPAA MQDPFYGSNG YAAPHAVQMA AMAQQQQAFM
501: LQQQMMMASH HPQAQQYHQA QAAPANPFGA NPFAPAGAQH PYGGAGTGMM PLHAVQGNAY TGLI

Best Arabidopsis Sequence Match ( AT5G35200.1 )
(BLAST)

001: MSGGGGSQSS LRRYLGAIKD TTTVSLAKVN SDYKELDIAI VKATNHVERP SKERYIRAIF MAISATRPRA DVAYCIHALA RRLSRTHNWA VALKTLIVIH
101: RALREVDQTF HEEVINYSRS RSHMLNMSHF KDDSGPNAWA YSAWVRFYAL FLEERLECFR VLKYDVEVDP PRTKDLDTPD LLEQLPALQE LLFRVLDCQP
201: EGAAVQNHII QLALSMVISE STKIYQALTD GIDNLVDKFF DMQRNDAVKA LDMYRRAVKQ AGRLSEFFEV CKSVNVGRGE RFIKIEQPPT SFLQAMEEYV
301: KEAPLAAGVK KEQVVEKLTA PKEILAIEYE IPPKVVEEKP ASPEPVKAEA EKPVEKQPDL LSMDDPAPMV SELEEKNALA LAIVPVSVEQ PHSTTDFTNG
401: NSTGWELALV TAPSSNEGAA ADSKLAGGLD KLTLDSLYED AIRVSQQQNR SYNPWEQNPV HNGHMMHQPF YASNGVAAPQ PFQMANQNHQ TFGYQHQNAG
501: MMMGPVQQPY QQQQQNMNNP FGNPFVSNGN PQQPQGYNPY PRYM

Arabidopsis Description

Putative clathrin assembly protein At5g35200 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHS0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.