Factsheet for TraesCS7B01G430700.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g017440.1.1	Tomato	cytosol	38.46	18.39
CDY42239	Canola	cytosol	41.26	17.51
TraesCS7B01G393800.2	Wheat	cytosol	60.14	15.09
TraesCS3B01G292000.2	Wheat	cytosol, mitochondrion, plastid	51.05	12.99
KRH37330	Soybean	cytosol	53.85	12.92
KRH12315	Soybean	cytosol	53.85	12.92
VIT_11s0103g00620.t01	Wine grape	cytosol	53.15	12.86
KRH19094	Soybean	cytosol	51.05	12.72
TraesCS1B01G388800.1	Wheat	cytosol, mitochondrion, plastid	49.65	12.59
KRH02791	Soybean	cytosol	49.65	12.37
PGSC0003DMT400036570	Potato	cytosol	48.95	12.22
Solyc02g043810.2.1	Tomato	cytosol	48.95	12.11
CDY47927	Canola	cytosol	42.66	12.08
CDY52732	Canola	cytosol	48.95	11.97
TraesCS6B01G181800.1	Wheat	cytosol	48.25	11.96
CDY38276	Canola	cytosol	48.95	11.82
Bra002750.1-P	Field mustard	cytosol	48.25	11.64
Bra020460.1-P	Field mustard	cytosol	48.25	11.62
AT5G57200.1	Thale cress	cytosol	47.55	11.51
CDX89382	Canola	cytosol	46.85	11.15
CDX94400	Canola	cytosol	46.15	11.07
AT4G25940.1	Thale cress	cytosol	46.15	10.98
Bra013934.1-P	Field mustard	cytosol	46.15	10.98
TraesCS6B01G407500.2	Wheat	cytosol	44.06	10.66
TraesCS7B01G040500.1	Wheat	cytosol	41.26	10.46
TraesCS7B01G322300.1	Wheat	mitochondrion	39.86	10.09
TraesCS4B01G207200.1	Wheat	cytosol, mitochondrion, plastid	36.36	8.15
TraesCS1B01G277200.1	Wheat	cytosol	32.17	7.6
TraesCS1B01G044800.1	Wheat	cytosol	32.17	7.44
Solyc12g017430.1.1	Tomato	nucleus	10.49	7.08
PGSC0003DMT400025029	Potato	nucleus	13.29	6.69
TraesCS5B01G296700.1	Wheat	mitochondrion	17.48	6.54
TraesCS4B01G088300.1	Wheat	mitochondrion	14.69	5.32

Protein Annotations

EnsemblPlants:TraesCS7B01G430700.2	EnsemblPlantsGene:TraesCS7B01G430700	Gene3D:1.25.40.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005543
GO:GO:0008289	InterPro:ANTH_dom	InterPro:ENTH_VHS	InterPro:IPR008942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF21
PFAM:PF07651	SEG:seg	SUPFAM:SSF48464	TMHMM:TMhelix	MapMan:35.1	:

Description

No Description!

Coordinates

chr7B:-:699154418..699156433

Molecular Weight (calculated)

16092.7 Da

IEP (calculated)

10.357

GRAVY (calculated)

0.165

Length

143 amino acids

Sequence
(BLAST)

001: MGSGTWRKAY GALKDSTKVG LANFNIEYKD LDIAIVKTTN HVECPPKERH FRRIVFANSA NRPRARMSKT KSWIVGSLFV YLGSSSLSVY LCRLIILDSI
101: ISTRLQFFIG NEGFVYISST LFGFLGSLLP IVQHMSSNIS YLM

Best Arabidopsis Sequence Match ( AT2G01600.1 )
(BLAST)

001: MGTLQSWRKA YGALKDSTKV GLVRVNSEYA DLDVAIVKAT NHVECPPKDR HLRKIFAATS VTRARADVAY CIHALSRRLH KTRNWTVALK TLIVIHRLLR
101: EGDPTFREEL LNFSQRGRIL QLSNFKDDSS PIAWDCSAWV RTYALFLEER LECFRVLKYD TEAERLPKSN PGQDKGYSRT RDLDGEELLE QLPALQQLLY
201: RLIGCRPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII NLIDKFFEMA KHEAITSLEI YKRAGQQARS LSDFYEACKG LELARNFQFP VLREPPQSFL
301: TTMEEYIKEA PRVVDVPAEP LLLTYRPDDG LTTEDTEPSH EEREMLPSDD VVVVSEETEP SPPPPPSANA QNFIDTDDLW GLNTGAPDTS VIEDQNALAL
401: AIVSTDADPP TPHFGQPNNY DPTGWELALV TAPSSDISAS TERKLAGGLD TLTLSSLYDD GAYIASQRPV YGAPAPNPFA SHDPFASSNG TAPPPQQQAV
501: NNPFGAYQQT YQHQPQPTYQ HQSNPPTNNS NPFGDFGEFP VNPVSQQPNT SGYGDFSVNQ HNNPFRSTGL I

Arabidopsis Description

Putative clathrin assembly protein At2g01600 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBH2]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.