Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g017430.1.1 | Tomato | nucleus | 67.25 | 90.09 |
| PGSC0003DMT400017184 | Potato | cytosol | 33.8 | 22.27 |
| PGSC0003DMT400036570 | Potato | cytosol | 42.25 | 20.94 |
| GSMUA_Achr4P20660_001 | Banana | cytosol | 39.79 | 20.29 |
| GSMUA_Achr7P04960_001 | Banana | cytosol | 39.08 | 20.18 |
| GSMUA_Achr1P15690_001 | Banana | cytosol | 38.73 | 19.68 |
| KXG20765 | Sorghum | mitochondrion | 38.73 | 19.37 |
| GSMUA_Achr3P05590_001 | Banana | cytosol | 36.27 | 18.86 |
| TraesCS7D01G414100.1 | Wheat | mitochondrion | 36.27 | 18.13 |
| TraesCS7A01G490500.2 | Wheat | cytosol | 36.62 | 18.12 |
| EES06356 | Sorghum | cytosol | 36.27 | 18.07 |
| HORVU7Hr1G109970.5 | Barley | cytosol | 36.27 | 18.01 |
| KXG20534 | Sorghum | cytosol, mitochondrion | 36.62 | 17.93 |
| TraesCS7A01G421900.1 | Wheat | mitochondrion | 35.92 | 17.89 |
| TraesCS7D01G476900.2 | Wheat | cytosol | 36.27 | 17.79 |
| Zm00001d036672_P005 | Maize | cytosol | 35.92 | 17.74 |
| TraesCS7B01G393800.2 | Wheat | cytosol | 35.56 | 17.72 |
| TraesCS7B01G322300.1 | Wheat | mitochondrion | 35.21 | 17.7 |
| Zm00001d015430_P001 | Maize | cytosol | 35.56 | 17.5 |
| Os02t0175700-01 | Rice | plasma membrane | 35.92 | 17.5 |
| TraesCS6D01G143700.1 | Wheat | cytosol | 35.92 | 17.38 |
| TraesCS6B01G181800.1 | Wheat | cytosol | 34.86 | 17.16 |
| TraesCS6A01G154100.1 | Wheat | cytosol | 35.21 | 17.06 |
| HORVU6Hr1G030980.1 | Barley | cytosol | 36.62 | 16.8 |
| PGSC0003DMT400075923 | Potato | cytosol | 33.1 | 16.7 |
| TraesCS7B01G430700.2 | Wheat | cytosol | 6.69 | 13.29 |
| PGSC0003DMT400040963 | Potato | cytosol | 29.58 | 13.1 |
| PGSC0003DMT400079380 | Potato | cytosol, mitochondrion, plastid | 28.17 | 12.99 |
| PGSC0003DMT400035762 | Potato | cytosol | 28.87 | 12.83 |
| PGSC0003DMT400020390 | Potato | cytosol | 25.35 | 12.12 |
| PGSC0003DMT400076552 | Potato | cytosol, mitochondrion | 24.65 | 12.03 |
| HORVU7Hr1G097510.7 | Barley | mitochondrion | 21.13 | 11.74 |
| PGSC0003DMT400059062 | Potato | cytosol | 23.59 | 11.24 |
| Os06t0699800-00 | Rice | cytosol | 13.38 | 8.66 |
| PGSC0003DMT400036091 | Potato | cytosol | 18.31 | 7.16 |
| PGSC0003DMT400075705 | Potato | mitochondrion | 8.8 | 6.38 |
| PGSC0003DMT400001773 | Potato | nucleus | 16.9 | 6.37 |
| PGSC0003DMT400092428 | Potato | cytosol, mitochondrion, nucleus | 8.8 | 5.68 |
| PGSC0003DMT400058608 | Potato | mitochondrion | 7.75 | 5.5 |
| Solyc12g017440.1.1 | Tomato | cytosol | 5.63 | 5.35 |
| Os06t0661400-01 | Rice | cytosol | 4.23 | 4.8 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400025029 | EnsemblPlantsGene:PGSC0003DMG400009667 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| PANTHER:PTHR22951 | PANTHER:PTHR22951:SF21 | PGSC:PGSC0003DMG400009667 | SEG:seg | UniParc:UPI000296C2B5 | UniProt:M1AKX3 |
| MapMan:35.1 | : | : | : | : | : |
Description
Clathrin assembly protein [Source:PGSC_GENE;Acc:PGSC0003DMG400009667]
Coordinates
chr12:-:11083555..11088303
Molecular Weight (calculated)
32387.7 Da
IEP (calculated)
4.682
GRAVY (calculated)
-1.045
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEYIREAPQ TDSMPNNRLE YRETKQKPEK PEEIVSEASE NKVPEAKISE VKHTEAQEET VPKKEETPPL ISTEEPVDLL GLNQVDPRVA ELEKSNALAL
101: AIVPPGKENP SANNQVSETR KTSGWELALV TEPSNNRSQI TSDKELAGGF DKLLLDSLYQ DDASRRQIQL QQAGYSAGYG YGYEMPGQSS VNHNDPFAMS
201: NHIAPPTSVQ MMAQQQQQYQ MMQQQQQYMM QQQQRPQQNM LMVHHQYQGQ YSQQTWYMRS SNPFGDPFSY PQNNMPPRGN HPLI
101: AIVPPGKENP SANNQVSETR KTSGWELALV TEPSNNRSQI TSDKELAGGF DKLLLDSLYQ DDASRRQIQL QQAGYSAGYG YGYEMPGQSS VNHNDPFAMS
201: NHIAPPTSVQ MMAQQQQQYQ MMQQQQQYMM QQQQRPQQNM LMVHHQYQGQ YSQQTWYMRS SNPFGDPFSY PQNNMPPRGN HPLI
001: MATFNSFRKA VGAIKDSTTV SIAKVNSEFK DLDVAIVKAT NHVESAPKER HIRRIFSATS VVQPRADVAY CIHALAKRLS KTRNWVVAIK VLIVIHRTLR
101: EGDPTFREEL LNYSHRGHIL RISNFKDDTS PLAWDCSAWI RTYALFLEER LECYRVLKYD IEAERLPKGS GASSKNVDFN ASQTYRTRML SDEELLEQLP
201: ALQQLLYRLI GCQPEGSAYS NYLIQYALAL VLKESFKIYC AINDGIINLV DMFFEMSRHD AVKALNIYKR AGQQAENLAD FYEYCKGLEL ARNFQFPTLR
301: QPPPSFLATM EDYIKEAPQS GSVQKKLEYQ EKEEEEQEEE EAEHSVQPEE PAEADNQKEN SEGDQPLIEE EEEDQEKIEE EDAKPSFLID TDDLLGLNEI
401: NPKAAEIEDR NALALAIYPP GHEAPGPSNI LSLIETGGSG WELALVTPQN NNNNNNPRPA PNTKLAGGFD NLLLDSLYED DSARRQIQLT NAGYGHGGID
501: TTAAPPNPFQ MQQDPFAMSN NIAPPTNVQM AMQQQQQQQM TMMHQSPYNY THPHDYHQNH HHHQFSAGPS PSNPFGDAFL ALPPPPGSAG PQQNNHHHML
601: L
101: EGDPTFREEL LNYSHRGHIL RISNFKDDTS PLAWDCSAWI RTYALFLEER LECYRVLKYD IEAERLPKGS GASSKNVDFN ASQTYRTRML SDEELLEQLP
201: ALQQLLYRLI GCQPEGSAYS NYLIQYALAL VLKESFKIYC AINDGIINLV DMFFEMSRHD AVKALNIYKR AGQQAENLAD FYEYCKGLEL ARNFQFPTLR
301: QPPPSFLATM EDYIKEAPQS GSVQKKLEYQ EKEEEEQEEE EAEHSVQPEE PAEADNQKEN SEGDQPLIEE EEEDQEKIEE EDAKPSFLID TDDLLGLNEI
401: NPKAAEIEDR NALALAIYPP GHEAPGPSNI LSLIETGGSG WELALVTPQN NNNNNNPRPA PNTKLAGGFD NLLLDSLYED DSARRQIQLT NAGYGHGGID
501: TTAAPPNPFQ MQQDPFAMSN NIAPPTNVQM AMQQQQQQQM TMMHQSPYNY THPHDYHQNH HHHQFSAGPS PSNPFGDAFL ALPPPPGSAG PQQNNHHHML
601: L
Arabidopsis Description
Putative clathrin assembly protein At4g25940 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYT2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.