Factsheet for TraesCS7A01G421900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G414100.1	Wheat	mitochondrion	94.91	95.25
TraesCS7B01G322300.1	Wheat	mitochondrion	93.86	94.69
HORVU7Hr1G097510.7	Barley	mitochondrion	78.25	87.28
KXG20765	Sorghum	mitochondrion	68.95	69.19
Os06t0699800-00	Rice	cytosol	52.63	68.34
CDY42239	Canola	cytosol	37.19	62.91
Solyc12g017440.1.1	Tomato	cytosol	31.93	60.87
GSMUA_Achr3P05590_001	Banana	cytosol	54.74	57.14
TraesCS1A01G369700.1	Wheat	cytosol, mitochondrion, plastid	53.16	53.63
CDY47927	Canola	cytosol	46.84	52.87
Solyc02g043810.2.1	Tomato	cytosol	53.33	52.6
PGSC0003DMT400036570	Potato	cytosol	52.81	52.53
KRH19094	Soybean	cytosol	52.81	52.44
CDY52732	Canola	cytosol	53.68	52.31
VIT_11s0103g00620.t01	Wine grape	cytosol	54.21	52.28
TraesCS3A01G258900.1	Wheat	cytosol	51.05	52.06
CDY38276	Canola	cytosol	54.04	52.03
AT5G57200.1	Thale cress	cytosol	53.86	51.95
KRH02791	Soybean	cytosol	52.28	51.92
Bra002750.1-P	Field mustard	cytosol	53.86	51.77
Bra020460.1-P	Field mustard	cytosol	52.98	50.84
KRH37330	Soybean	cytosol	53.16	50.84
KRH12315	Soybean	cytosol	53.16	50.84
AT4G25940.1	Thale cress	cytosol	52.81	50.08
TraesCS7A01G490500.2	Wheat	cytosol	50.18	49.83
CDX94400	Canola	cytosol	51.93	49.66
CDX89382	Canola	cytosol	51.93	49.25
Bra013934.1-P	Field mustard	cytosol	51.93	49.25
TraesCS6A01G154100.1	Wheat	cytosol	49.3	47.95
TraesCS7A01G138400.1	Wheat	cytosol	45.96	46.45
TraesCS6A01G370500.1	Wheat	cytosol	41.93	41.07
Solyc12g017430.1.1	Tomato	nucleus	14.21	38.21
PGSC0003DMT400025029	Potato	nucleus	17.89	35.92
TraesCS4A01G097200.1	Wheat	cytosol, mitochondrion, plastid	31.05	27.74
TraesCS1A01G035100.1	Wheat	cytosol	29.65	27.44
TraesCS1A01G266200.1	Wheat	cytosol	28.95	27.27
TraesCS5A01G297400.1	Wheat	mitochondrion	14.56	22.02
TraesCS4A01G227800.1	Wheat	mitochondrion	12.81	18.48

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2	InterPro:ENTH
InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289
GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942
InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF20
SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	EnsemblPlantsGene:TraesCS7A01G421900	EnsemblPlants:TraesCS7A01G421900.1	TIGR:cd03564
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:612697951..612700926

Molecular Weight (calculated)

61633.7 Da

IEP (calculated)

5.280

GRAVY (calculated)

-0.301

Length

570 amino acids

Sequence
(BLAST)

001: MGTPSMQKSW RKACGAIKDS TTVSLAKVNS GRDHLKDLDV AVVKATSHVE RPPKDRHLAK IVGARSRTEV SHCVHALARR LSNTSNWVVA LKALVVIHRA
101: LREGDGGAFR EELLSHGRRR GHALRMSSFK DDSGHLAWDC SAWVRTYALF LEERLECFAV LRYDVEAERL RAPAPAAEGQ TPHTKAQGRT RGLGKDDLLE
201: QLPALQQLLF RLVGCQPEGA AFGNYLIQYA LALVLKESFK IYCAVNDGII NLVDVFFDMS KLDAIKAQDI YRRTGTLAKS LSEFYVLCRG LELARNFQFP
301: VLREPPASFL ATMEEYIREA PRAGHVANKT IEYRQLDPTA DQEEQPPPEP PREATTEEPT VEEPLPEPEE EAHSATDLDD EPEPATTTAD FDLLGLHEVS
401: SAAAEIEESN ALALAIVAPG GGSSASASAS AAVGMAGSSG WELALVAART DISNRSAEMK LAGGFDGLLL DSLYEDAARR QQQQATHADP AGDPFAASTS
501: VAPPTDVQMS MMQQQQQEMF GMPLPFQHAG AAAASSQALA NPFGDAYSAM LPQGQGQGTP FHGHGSGSLI

Best Arabidopsis Sequence Match ( AT1G14910.1 )
(BLAST)

001: MGTLQSWRRA YGALKDTTKV GLVRVNSDYA ELDVAIVKAT NHVECPPKDR HLRKIFLATS AIRPRADVAY CIHALSRRLH KTRNWTVALK ALLVIHRLLR
101: DGDPTFREEL LNFSQKGRIM QISNFKDDSS PVAWDCSGWV RTYALFLEER LECFRVLKYD IEAERLPKVS PGQEKGYSKT RDLDGEKLLE QLPALQQLLH
201: RLIGCKPEGA AKHNHIIQYA LSLVLKESFK VYCAINEGII NLVEKFFEMP RHEAIKALEI YKRAGLQAGN LSAFYEVCKG LELARNFQFP VLREPPQSFL
301: TTMEEYMRDA PQMVDVTSGP LLLTYTPDDG LTSEDVGPSH EEHETSSPSD SAVVPSEETQ LSSQSPPSVE TPQNFIDTDD LLGLHDDTPD PLAILDQNAL
401: ALALVSNDVD SSPFSFGQAR DLDPSGWELA LVTTPSNDIS AATERQLAGG LDTLTLNSLY DDGALRAAQQ PAYGVPASNP FEVQDLFAFS DSVSPPSAVN
501: NPFGLYEPTY HQQEQQPQLQ VAPSPANPFG DFGEFPIVPV SEPQSTTSFG AFPVPVSEPS NTTGFGEIPV VPVTEPPNTT AFGEFPVVPV SEPQNITGFG
601: ALPVTPASEP SNTTGFGEFP VVSVSAPQNT TGFGALPVIP VSEPSKTTGL GEFPVVPVSE PQNTTGFGEF PVNAGAHEQH NSNNPFGSTG FL

Arabidopsis Description

Putative clathrin assembly protein At1g14910 [Source:UniProtKB/Swiss-Prot;Acc:P94017]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.