Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1D01G036500.1 | Wheat | cytosol | 95.45 | 95.15 |
TraesCS1B01G044800.1 | Wheat | cytosol | 94.64 | 94.34 |
HORVU1Hr1G005290.1 | Barley | cytosol | 91.23 | 90.94 |
Os05t0112101-01 | Rice | plasma membrane | 67.69 | 71.77 |
EES18894 | Sorghum | cytosol | 64.77 | 64.04 |
Zm00001d035652_P001 | Maize | cytosol | 62.01 | 63.99 |
CDY35361 | Canola | cytosol | 52.44 | 54.65 |
CDX76976 | Canola | cytosol | 52.44 | 54.47 |
CDY11530 | Canola | cytosol | 51.14 | 54.31 |
TraesCS4A01G097200.1 | Wheat | cytosol, mitochondrion, plastid | 55.84 | 53.92 |
CDX68831 | Canola | cytosol | 51.62 | 53.81 |
CDX75232 | Canola | cytosol | 51.62 | 53.63 |
GSMUA_Achr9P03950_001 | Banana | cytosol, mitochondrion, plastid | 44.97 | 52.56 |
KRH52429 | Soybean | endoplasmic reticulum | 54.38 | 52.26 |
PGSC0003DMT400079380 | Potato | cytosol, mitochondrion, plastid | 51.95 | 51.95 |
Bra007800.1-P | Field mustard | cytosol | 51.3 | 51.55 |
Bra011333.1-P | Field mustard | cytosol | 52.44 | 51.52 |
VIT_11s0016g05480.t01 | Wine grape | cytosol | 52.76 | 51.34 |
GSMUA_Achr11P... | Banana | cytosol | 37.99 | 51.32 |
Solyc07g008060.1.1 | Tomato | cytosol | 51.14 | 51.3 |
KRH61760 | Soybean | mitochondrion | 54.22 | 51.23 |
PGSC0003DMT400040963 | Potato | cytosol | 53.25 | 51.17 |
PGSC0003DMT400035762 | Potato | cytosol | 52.92 | 51.02 |
Solyc08g059660.1.1 | Tomato | cytosol | 52.27 | 50.63 |
AT4G32285.2 | Thale cress | cytosol | 52.11 | 50.55 |
Bra034252.1-P | Field mustard | cytosol | 53.25 | 50.54 |
VIT_04s0008g05540.t01 | Wine grape | cytosol | 54.22 | 50.38 |
Solyc06g011450.1.1 | Tomato | cytosol | 50.0 | 50.16 |
AT2G25430.1 | Thale cress | cytosol | 52.76 | 49.77 |
CDX76977 | Canola | cytosol | 41.88 | 49.43 |
KRH20132 | Soybean | cytosol | 48.86 | 49.18 |
CDX76760 | Canola | cytosol | 37.18 | 49.04 |
GSMUA_Achr6P33420_001 | Banana | cytosol, mitochondrion, plastid | 42.86 | 41.77 |
TraesCS1A01G266200.1 | Wheat | cytosol | 40.75 | 41.49 |
KRH05593 | Soybean | cytosol | 5.68 | 40.7 |
TraesCS7A01G421900.1 | Wheat | mitochondrion | 27.44 | 29.65 |
TraesCS3A01G258900.1 | Wheat | cytosol | 25.81 | 28.44 |
TraesCS1A01G369700.1 | Wheat | cytosol, mitochondrion, plastid | 25.97 | 28.32 |
TraesCS7A01G490500.2 | Wheat | cytosol | 26.3 | 28.22 |
TraesCS7A01G138400.1 | Wheat | cytosol | 25.0 | 27.3 |
TraesCS6A01G154100.1 | Wheat | cytosol | 24.35 | 25.6 |
TraesCS6A01G370500.1 | Wheat | cytosol | 23.86 | 25.26 |
TraesCS5A01G297400.1 | Wheat | mitochondrion | 13.8 | 22.55 |
TraesCS4A01G227800.1 | Wheat | mitochondrion | 12.18 | 18.99 |
Protein Annotations
Gene3D:1.20.58.150 | Gene3D:1.25.40.90 | MapMan:35.1 | InterPro:ANTH_dom | InterPro:Clathrin_AP_dom2 | InterPro:ENTH |
InterPro:ENTH_VHS | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005543 | GO:GO:0005545 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008289 |
GO:GO:0009987 | GO:GO:0016043 | GO:GO:0030136 | GO:GO:0030276 | GO:GO:0048268 | InterPro:IPR008942 |
InterPro:IPR013809 | InterPro:IPR014712 | PFAM:PF07651 | PFscan:PS50942 | PANTHER:PTHR22951 | PANTHER:PTHR22951:SF23 |
SMART:SM00273 | SUPFAM:SSF48464 | SUPFAM:SSF89009 | EnsemblPlantsGene:TraesCS1A01G035100 | EnsemblPlants:TraesCS1A01G035100.1 | TIGR:cd03564 |
SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1A:+:18310849..18312699
Molecular Weight (calculated)
65786.6 Da
IEP (calculated)
6.207
GRAVY (calculated)
-0.232
Length
616 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIRKALGAV KDQATIGIAK VSSAVAPDLD VAIVRATAHD DGPPDERHVQ EVLRLTSGSS RIHVAACVAT VSRRLARTRD YVVAAKCLAL LHRLVADGDP
101: HFRHELVRPA VSMGRRGGGA PVLAALSDFR DEAHSASWDH SAFVRAYALY LDDRVRFLLA LLPAPRTVRF ADDGYGYGGR AGGASPPPDM TVSVHDMDVE
201: GLLARGQQLR QLIDRFLACR PTGAARRSRV VLATLWPVVK ESARLYEDVA VVLAVLLDRF FDMEYPDCVK AFEAHVSTAR LVDDLLAFYS WCDDAGVARS
301: SDLPEVKRID DKLLETLEQF VRERGRAVQN SPPPRQLQHA VQEASPSEDE HHQAEYDMNG IKALPAPEHV KAATVARPEP AKASAAPVSR APDQTTDLVD
401: LRESAAGADE QGNKLALALF SEQPQSANSS WVAFPSDDSA PKATTTSAWQ TPAAEPGKAD WELALVETAS NLSRQTAALG GGMDPLLLHG MYDQGDVRHH
501: ARAQAASGSA SSVALPGAPA AHNNLALPGP DGAVGGDPFA ASLSVPPPSY VQMAEMERKQ ELLAQEQRMW AQYRQGGMQG QAGLNGLAVG GGGSAFASST
601: SVPMPMAYHG AGGYYY
101: HFRHELVRPA VSMGRRGGGA PVLAALSDFR DEAHSASWDH SAFVRAYALY LDDRVRFLLA LLPAPRTVRF ADDGYGYGGR AGGASPPPDM TVSVHDMDVE
201: GLLARGQQLR QLIDRFLACR PTGAARRSRV VLATLWPVVK ESARLYEDVA VVLAVLLDRF FDMEYPDCVK AFEAHVSTAR LVDDLLAFYS WCDDAGVARS
301: SDLPEVKRID DKLLETLEQF VRERGRAVQN SPPPRQLQHA VQEASPSEDE HHQAEYDMNG IKALPAPEHV KAATVARPEP AKASAAPVSR APDQTTDLVD
401: LRESAAGADE QGNKLALALF SEQPQSANSS WVAFPSDDSA PKATTTSAWQ TPAAEPGKAD WELALVETAS NLSRQTAALG GGMDPLLLHG MYDQGDVRHH
501: ARAQAASGSA SSVALPGAPA AHNNLALPGP DGAVGGDPFA ASLSVPPPSY VQMAEMERKQ ELLAQEQRMW AQYRQGGMQG QAGLNGLAVG GGGSAFASST
601: SVPMPMAYHG AGGYYY
001: MALSMRKAIG VVKDQTSIGI AKVASNMAPD LEVAIVKATS HDDDQSSDKY IREILSLTSL SRGYVHACVT SVSRRLKKTR DWIVALKALM LVHRLLNEGD
101: PLFQEEILYA TRRGTRILNM SDFRDEAHSS SWDHSAFVRT YASYLDQRLE LALFERRGRN GGGSSSSHQS NGDDGYNRSR DDFRSPPPRT YDYETGNGFG
201: MPKRSRSFGD VNEIGAREEK KSVTPLREMT PERIFGKMGH LQRLLDRFLS CRPTGLAKNS RMILIAMYPV VKESFRLYAD ICEVLAVLLD KFFDMEYTDC
301: VKAFDAYASA AKQIDELIAF YHWCKDTGVA RSSEYPEVQR ITSKLLETLE EFVRDRAKRA KSPERKEIEA PPAPAPPVEE PVDMNEIKAL PPPENHTPPP
401: PPAPEPKPQQ PQVTDDLVNL REDDVSGDDQ GNKFALALFA GPPANNGKWE AFSSDNNVTS AWQNPAAELG KADWELALVE TASNLEHQKA AMGGGLDPLL
501: LNGMYDQGAV RQHVSTSELT GGSSSSVALP LPGKVNSHIL ALPAPDGTVQ KVNQDPFAAS LTIPPPSYVQ MAEMDKKQYL LTQEQQLWQQ YQQEGMRGQA
601: SLAKMNTAQT AMPYGMPPVN GMGPSPMGYY YNNPY
101: PLFQEEILYA TRRGTRILNM SDFRDEAHSS SWDHSAFVRT YASYLDQRLE LALFERRGRN GGGSSSSHQS NGDDGYNRSR DDFRSPPPRT YDYETGNGFG
201: MPKRSRSFGD VNEIGAREEK KSVTPLREMT PERIFGKMGH LQRLLDRFLS CRPTGLAKNS RMILIAMYPV VKESFRLYAD ICEVLAVLLD KFFDMEYTDC
301: VKAFDAYASA AKQIDELIAF YHWCKDTGVA RSSEYPEVQR ITSKLLETLE EFVRDRAKRA KSPERKEIEA PPAPAPPVEE PVDMNEIKAL PPPENHTPPP
401: PPAPEPKPQQ PQVTDDLVNL REDDVSGDDQ GNKFALALFA GPPANNGKWE AFSSDNNVTS AWQNPAAELG KADWELALVE TASNLEHQKA AMGGGLDPLL
501: LNGMYDQGAV RQHVSTSELT GGSSSSVALP LPGKVNSHIL ALPAPDGTVQ KVNQDPFAAS LTIPPPSYVQ MAEMDKKQYL LTQEQQLWQQ YQQEGMRGQA
601: SLAKMNTAQT AMPYGMPPVN GMGPSPMGYY YNNPY
Arabidopsis Description
Probable clathrin assembly protein At4g32285 [Source:UniProtKB/Swiss-Prot;Acc:Q8S9J8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.