Factsheet for TraesCS3A01G258900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G259000.2	Wheat	cytosol	98.03	97.34
TraesCS3B01G292000.2	Wheat	cytosol, mitochondrion, plastid	97.67	97.15
Os01t0694900-01	Rice	cytosol	85.15	83.8
EES01312	Sorghum	cytosol	81.22	80.64
TraesCS1A01G369700.1	Wheat	cytosol, mitochondrion, plastid	79.07	78.23
GSMUA_Achr9P21890_001	Banana	cytosol	72.99	72.86
GSMUA_Achr4P13420_001	Banana	cytosol	69.59	72.85
Zm00001d043773_P003	Maize	cytosol	78.35	69.86
VIT_01s0011g05330.t01	Wine grape	cytosol, mitochondrion	66.19	65.26
KRH42533	Soybean	cytosol	66.01	64.96
KRH58627	Soybean	nucleus	65.65	64.5
PGSC0003DMT400075923	Potato	cytosol	64.58	64.12
Solyc04g007860.2.1	Tomato	cytosol, plastid	64.4	63.94
KRH38239	Soybean	cytosol	61.18	61.73
CDY17660	Canola	cytosol	62.08	60.77
Bra024871.1-P	Field mustard	cytosol	61.9	60.6
CDY36239	Canola	cytosol	61.54	60.25
AT2G01600.1	Thale cress	cytosol, mitochondrion	61.0	59.72
CDY09433	Canola	cytosol, mitochondrion	61.36	59.45
CDY48813	Canola	cytosol	61.9	59.35
CDY17459	Canola	cytosol	60.29	59.12
CDY04095	Canola	cytosol	60.11	58.84
Bra017439.1-P	Field mustard	cytosol	60.11	58.84
TraesCS7A01G421900.1	Wheat	mitochondrion	52.06	51.05
TraesCS7A01G490500.2	Wheat	cytosol	51.52	50.17
TraesCS6A01G154100.1	Wheat	cytosol	52.24	49.83
AT1G14910.1	Thale cress	mitochondrion	59.75	48.27
Bra026647.1-P	Field mustard	cytosol	61.0	47.36
CDY45299	Canola	mitochondrion	57.96	47.09
CDY53525	Canola	cytosol, mitochondrion	58.5	46.92
TraesCS7A01G138400.1	Wheat	cytosol	47.23	46.81
Bra026179.1-P	Field mustard	cytosol, mitochondrion	58.14	42.43
TraesCS6A01G370500.1	Wheat	cytosol	41.86	40.21
TraesCS4A01G097200.1	Wheat	cytosol, mitochondrion, plastid	31.13	27.27
TraesCS1A01G266200.1	Wheat	cytosol	28.09	25.95
TraesCS1A01G035100.1	Wheat	cytosol	28.44	25.81
TraesCS5A01G297400.1	Wheat	mitochondrion	13.95	20.69
TraesCS4A01G227800.1	Wheat	mitochondrion	13.6	19.24

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.6.2	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2	InterPro:ENTH
InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289
GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942
InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF56
SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	EnsemblPlantsGene:TraesCS3A01G258900	EnsemblPlants:TraesCS3A01G258900.1	TIGR:cd03564
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:481068943..481074831

Molecular Weight (calculated)

61867.5 Da

IEP (calculated)

4.919

GRAVY (calculated)

-0.331

Length

559 amino acids

Sequence
(BLAST)

001: MSALQSWRKA YGALKDTTTV SLASLNSDFK DLDVAIVKAT NHVECPPKDR HLRKIVAASS MARPQADVAY CIHALARRLA KTRSWIVALK TLVVIHRLLR
101: DGEPTFREEL LNFTQRVQIL QLSNFKDNSS PIAWDYSSWV RTYGLFLEER LQCFRILKYD IEAERLPKQG QGTEKAHSQT RELDSQALLE QMPALQQLLY
201: RLIGCRPEGA ANTNYLVQYA LALVLKESFK IYCAINDGII NLVDKFFEMP RHDALKALEI YRRAGQQAGN LSDFYENCRG LELARNFQFP TLREPPQTFL
301: STMEEYVKEA PRMVPIKDPL EFPERLLLTY KPEESEEVPE PVPVQEEVPQ MEEPAPVPSL TEVASSPPNT RVADTGDLLG LSDPNPSVSA IEESNALALA
401: ITPTGVNTST TSTASVQDIG FDPTGWELAL VTTSSSNTNS LAVDSTLGGG FDKLTLDSLY DDGTYRQMQQ QLPYGSVPHN PFMASDPFTV SNQVASPPSV
501: QMAAMGQQPQ QMQPNPFGPP SHPQPVPNPF LDAGFGPFPA ANGNGMHAQA NPFGTAQLL

Best Arabidopsis Sequence Match ( AT1G14910.1 )
(BLAST)

001: MGTLQSWRRA YGALKDTTKV GLVRVNSDYA ELDVAIVKAT NHVECPPKDR HLRKIFLATS AIRPRADVAY CIHALSRRLH KTRNWTVALK ALLVIHRLLR
101: DGDPTFREEL LNFSQKGRIM QISNFKDDSS PVAWDCSGWV RTYALFLEER LECFRVLKYD IEAERLPKVS PGQEKGYSKT RDLDGEKLLE QLPALQQLLH
201: RLIGCKPEGA AKHNHIIQYA LSLVLKESFK VYCAINEGII NLVEKFFEMP RHEAIKALEI YKRAGLQAGN LSAFYEVCKG LELARNFQFP VLREPPQSFL
301: TTMEEYMRDA PQMVDVTSGP LLLTYTPDDG LTSEDVGPSH EEHETSSPSD SAVVPSEETQ LSSQSPPSVE TPQNFIDTDD LLGLHDDTPD PLAILDQNAL
401: ALALVSNDVD SSPFSFGQAR DLDPSGWELA LVTTPSNDIS AATERQLAGG LDTLTLNSLY DDGALRAAQQ PAYGVPASNP FEVQDLFAFS DSVSPPSAVN
501: NPFGLYEPTY HQQEQQPQLQ VAPSPANPFG DFGEFPIVPV SEPQSTTSFG AFPVPVSEPS NTTGFGEIPV VPVTEPPNTT AFGEFPVVPV SEPQNITGFG
601: ALPVTPASEP SNTTGFGEFP VVSVSAPQNT TGFGALPVIP VSEPSKTTGL GEFPVVPVSE PQNTTGFGEF PVNAGAHEQH NSNNPFGSTG FL

Arabidopsis Description

Putative clathrin assembly protein At1g14910 [Source:UniProtKB/Swiss-Prot;Acc:P94017]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.