CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58627	Soybean	nucleus	96.83	96.66
KRH38239	Soybean	cytosol	80.99	83.03
VIT_01s0011g05330.t01	Wine grape	cytosol, mitochondrion	78.35	78.48
Solyc04g007860.2.1	Tomato	cytosol, plastid	76.23	76.91
PGSC0003DMT400075923	Potato	cytosol	76.06	76.73
CDY17660	Canola	cytosol	75.18	74.78
Bra024871.1-P	Field mustard	cytosol	74.82	74.43
CDY36239	Canola	cytosol	74.3	73.91
AT2G01600.1	Thale cress	cytosol, mitochondrion	73.94	73.56
CDY17459	Canola	cytosol	72.54	72.28
CDY09433	Canola	cytosol, mitochondrion	73.42	72.27
CDY48813	Canola	cytosol	73.77	71.87
CDY04095	Canola	cytosol	72.18	71.8
Bra017439.1-P	Field mustard	cytosol	72.18	71.8
GSMUA_Achr9P21890_001	Banana	cytosol	70.42	71.43
GSMUA_Achr4P13420_001	Banana	cytosol	66.55	70.79
EES19899	Sorghum	cytosol, mitochondrion, plastid	69.54	70.04
Zm00001d038892_P001	Maize	mitochondrion	69.19	69.8
Os05t0549000-01	Rice	plasma membrane	69.54	69.66
TraesCS1D01G375800.1	Wheat	cytosol, mitochondrion, plastid	68.66	69.03
TraesCS1A01G369700.1	Wheat	cytosol, mitochondrion, plastid	68.49	68.85
TraesCS1B01G388800.1	Wheat	cytosol, mitochondrion, plastid	68.13	68.62
Os01t0694900-01	Rice	cytosol	67.96	67.96
EES01312	Sorghum	cytosol	66.2	66.79
TraesCS3B01G292000.2	Wheat	cytosol, mitochondrion, plastid	65.32	66.01
TraesCS3A01G258900.1	Wheat	cytosol	64.96	66.01
TraesCS3D01G259000.2	Wheat	cytosol	65.32	65.9
HORVU1Hr1G078340.3	Barley	plastid	68.84	61.77
Zm00001d009452_P007	Maize	cytosol, mitochondrion, plastid	63.2	61.68
Zm00001d043773_P003	Maize	cytosol	64.08	58.05
AT1G14910.1	Thale cress	mitochondrion	70.6	57.95
Bra026647.1-P	Field mustard	cytosol	72.71	57.36
CDY45299	Canola	mitochondrion	67.96	56.1
CDY53525	Canola	cytosol, mitochondrion	68.84	56.1
KRH02791	Soybean	cytosol	56.51	55.92
KRH19094	Soybean	cytosol	56.34	55.75
KRH12315	Soybean	cytosol	58.27	55.54
KRH37330	Soybean	cytosol	57.57	54.87
KRH20163	Soybean	cytosol	50.35	52.38
KRH03643	Soybean	mitochondrion	50.53	52.37
Bra026179.1-P	Field mustard	cytosol, mitochondrion	67.96	50.39
KRH05593	Soybean	cytosol	5.81	38.37
KRH54979	Soybean	cytosol	31.87	35.77
KRH58332	Soybean	mitochondrion	30.81	29.91
KRH10492	Soybean	cytosol, mitochondrion	30.81	29.36
KRH43936	Soybean	cytosol, mitochondrion	30.46	29.17
KRH52429	Soybean	endoplasmic reticulum	31.87	28.24
KRH61760	Soybean	mitochondrion	32.04	27.91
KRH20132	Soybean	cytosol	29.23	27.12
KRH41749	Soybean	cytosol	13.38	26.86
KRH60451	Soybean	mitochondrion	19.72	25.28
KRH09259	Soybean	cytosol, nucleus, peroxisome	18.13	23.95
KRH58584	Soybean	mitochondrion	16.73	23.81
KRH42490	Soybean	cytosol	16.9	23.76
KRH38757	Soybean	cytosol, nucleus, peroxisome	17.78	23.27
KRG89239	Soybean	cytosol, mitochondrion	13.73	20.31
KRH49763	Soybean	mitochondrion	13.56	19.79
KRH17907	Soybean	cytosol	23.94	18.63

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	EntrezGene:100794160	MapMan:22.1.6.2	EMBL:ACUP02004811	InterPro:ANTH_dom
InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	EnsemblPlantsGene:GLYMA_08G095000	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136
GO:GO:0030276	GO:GO:0048268	UniProt:I1KRS8	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712
EnsemblPlants:KRH42533	ProteinID:KRH42533	ProteinID:KRH42533.1	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951
PANTHER:PTHR22951:SF54	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI0002338B05	SEG:seg

Description

hypothetical protein

Coordinates

chr8:-:7229393..7239060

Molecular Weight (calculated)

63046.5 Da

IEP (calculated)

4.845

GRAVY (calculated)

-0.389

Length

568 amino acids

Sequence
(BLAST)

001: MGTLQSWRRA YGAIKDTTKV GLAHVNSDYA DLDVAIVKAT NHVECPPKER HLRKILFATS AVRPRADVAY CIHALSRRLT KTRNWTVALK TLIVIHRLLR
101: EGDPTFREEL LNFSQRGRIL QLSNFKDDSS PIAWDCSAWV RTYALFLEER LECFRILKYD IEAERLPKPV QGQEKGYSKT RDLDSEELLE QLPALQQLLY
201: RLVGCRPEGA AVSNYVIQYA LALVLKESFK IYCAINDGII NLVDKFFEMP RHEAIKALEA YKRAGQQAAS LSDFYDVCKG LELARNFQFP VLREPPQSFL
301: TTMEEYIKEA PRVVTVPTEP LLQLTYRPEE VLAIEDAKPS DEEQEPPVPV DNNVVVSDSE PAPPPPPPSS HNNFETGDLL GLNDTAPDAS SIEERNALAL
401: AIVPTETGTT SAFNTTAAQT KDFDPTGWEL ALVSTPSTDI SAANERQLAG GLDSLTLNSL YDEAAYRSQQ PVYGAPAPNP FEMQDPFALS SSIPPPPAVQ
501: LAAMQQQANP FGPYQQPFQP QPQPQQQQHH MLMNPANPFG DAGFGAFPAP NPAPHPQNNN PFGSTGLL

Best Arabidopsis Sequence Match ( AT2G01600.1 )
(BLAST)

001: MGTLQSWRKA YGALKDSTKV GLVRVNSEYA DLDVAIVKAT NHVECPPKDR HLRKIFAATS VTRARADVAY CIHALSRRLH KTRNWTVALK TLIVIHRLLR
101: EGDPTFREEL LNFSQRGRIL QLSNFKDDSS PIAWDCSAWV RTYALFLEER LECFRVLKYD TEAERLPKSN PGQDKGYSRT RDLDGEELLE QLPALQQLLY
201: RLIGCRPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII NLIDKFFEMA KHEAITSLEI YKRAGQQARS LSDFYEACKG LELARNFQFP VLREPPQSFL
301: TTMEEYIKEA PRVVDVPAEP LLLTYRPDDG LTTEDTEPSH EEREMLPSDD VVVVSEETEP SPPPPPSANA QNFIDTDDLW GLNTGAPDTS VIEDQNALAL
401: AIVSTDADPP TPHFGQPNNY DPTGWELALV TAPSSDISAS TERKLAGGLD TLTLSSLYDD GAYIASQRPV YGAPAPNPFA SHDPFASSNG TAPPPQQQAV
501: NNPFGAYQQT YQHQPQPTYQ HQSNPPTNNS NPFGDFGEFP VNPVSQQPNT SGYGDFSVNQ HNNPFRSTGL I

Arabidopsis Description

Putative clathrin assembly protein At2g01600 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBH2]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.