Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- cytosol 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH03643 | Soybean | mitochondrion | 96.52 | 96.17 |
VIT_11s0016g05900.t01 | Wine grape | cytosol | 75.64 | 81.3 |
Solyc07g007820.2.1 | Tomato | cytosol | 77.29 | 74.96 |
GSMUA_Achr6P03060_001 | Banana | cytosol | 73.63 | 73.49 |
CDY71126 | Canola | cytosol, mitochondrion | 57.33 | 73.47 |
GSMUA_Achr5P23570_001 | Banana | cytosol | 72.53 | 72.66 |
CDY41768 | Canola | cytosol, mitochondrion | 52.93 | 72.61 |
PGSC0003DMT400017184 | Potato | cytosol | 56.59 | 71.69 |
AT5G35200.2 | Thale cress | cytosol | 68.86 | 69.12 |
Zm00001d037484_P002 | Maize | cytosol, mitochondrion | 69.6 | 68.97 |
CDY12401 | Canola | cytosol, mitochondrion | 67.95 | 68.7 |
Bra038937.1-P | Field mustard | mitochondrion | 69.05 | 68.55 |
KXG19435 | Sorghum | cytosol, mitochondrion | 70.33 | 68.09 |
Os06t0175500-01 | Rice | plasma membrane | 69.78 | 66.84 |
TraesCS7A01G138400.1 | Wheat | cytosol | 68.13 | 65.96 |
HORVU7Hr1G028590.1 | Barley | cytosol | 68.13 | 65.84 |
TraesCS7D01G140200.1 | Wheat | cytosol | 67.95 | 65.78 |
TraesCS7B01G040500.1 | Wheat | cytosol | 67.77 | 65.6 |
Zm00001d045154_P002 | Maize | mitochondrion | 68.68 | 62.71 |
KXG31293 | Sorghum | cytosol | 60.99 | 60.55 |
Os02t0803300-01 | Rice | cytosol | 63.0 | 60.46 |
Zm00001d052008_P003 | Maize | cytosol | 58.97 | 58.23 |
HORVU6Hr1G087330.4 | Barley | cytosol | 58.24 | 54.64 |
TraesCS6A01G370500.1 | Wheat | cytosol | 57.14 | 53.61 |
TraesCS6D01G354100.2 | Wheat | cytosol | 57.88 | 53.38 |
TraesCS6B01G407500.2 | Wheat | cytosol | 57.69 | 53.3 |
KRH58627 | Soybean | nucleus | 52.93 | 50.79 |
KRH42533 | Soybean | cytosol | 52.38 | 50.35 |
KRH12315 | Soybean | cytosol | 53.85 | 49.33 |
KRH37330 | Soybean | cytosol | 53.3 | 48.83 |
KRH38239 | Soybean | cytosol | 49.45 | 48.74 |
KRH19094 | Soybean | cytosol | 50.55 | 48.08 |
KRH02791 | Soybean | cytosol | 50.37 | 47.91 |
KRH54979 | Soybean | cytosol | 35.9 | 38.74 |
KRH05593 | Soybean | cytosol | 5.49 | 34.88 |
KRH58332 | Soybean | mitochondrion | 32.23 | 30.09 |
KRH10492 | Soybean | cytosol, mitochondrion | 32.6 | 29.87 |
KRH43936 | Soybean | cytosol, mitochondrion | 32.05 | 29.51 |
KRH52429 | Soybean | endoplasmic reticulum | 32.23 | 27.46 |
KRH61760 | Soybean | mitochondrion | 31.87 | 26.69 |
KRH20132 | Soybean | cytosol | 28.94 | 25.82 |
KRH41749 | Soybean | cytosol | 13.37 | 25.8 |
KRH60451 | Soybean | mitochondrion | 19.6 | 24.15 |
KRH09259 | Soybean | cytosol, nucleus, peroxisome | 17.77 | 22.56 |
KRH38757 | Soybean | cytosol, nucleus, peroxisome | 17.22 | 21.66 |
KRH58584 | Soybean | mitochondrion | 15.2 | 20.8 |
KRG89239 | Soybean | cytosol, mitochondrion | 14.47 | 20.57 |
KRH49763 | Soybean | mitochondrion | 14.47 | 20.31 |
KRH42490 | Soybean | cytosol | 15.02 | 20.3 |
KRH17907 | Soybean | cytosol | 22.34 | 16.71 |
Protein Annotations
Gene3D:1.20.58.150 | Gene3D:1.25.40.90 | EntrezGene:100815239 | MapMan:35.1 | EMBL:ACUP02008244 | InterPro:ANTH_dom |
InterPro:Clathrin_AP_dom2 | InterPro:ENTH | InterPro:ENTH_VHS | EnsemblPlantsGene:GLYMA_13G160700 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0005543 | GO:GO:0005545 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008289 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0030136 |
GO:GO:0030276 | GO:GO:0048268 | UniProt:I1LZR5 | InterPro:IPR008942 | InterPro:IPR013809 | InterPro:IPR014712 |
EnsemblPlants:KRH20163 | ProteinID:KRH20163 | ProteinID:KRH20163.1 | PFAM:PF07651 | PFscan:PS50942 | PANTHER:PTHR22951 |
PANTHER:PTHR22951:SF32 | SMART:SM00273 | SUPFAM:SSF48464 | SUPFAM:SSF89009 | UniParc:UPI000233B395 | SEG:seg |
Description
hypothetical protein
Coordinates
chr13:-:27637320..27642737
Molecular Weight (calculated)
60682.1 Da
IEP (calculated)
5.905
GRAVY (calculated)
-0.410
Length
546 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGGTQKSLR KALGALKDTT TVSLAKVNSD YKELDIAIVR ATNHVERPAK EKHIRAIFSA ISATRPRADV AYCIHALARR LSKTHNWAVA LKTLIVIHRA
101: LREVDPTFHE ELINYGRSRS HMLNMAHFKD DSSPNAWDYS AWVRTYALFL EERLECFRVL KYDIEADRPR TKDLDTAELL EQLPTLQQLL HRVIDCQPHG
201: AAVNNFVIQL ALSMVASESI KIYQAISDGT VNMVDKFFEM QRHDALKALD IYRRVGHQAE RLSEFYEICR NLDIGRGEKF IKVEQPPSSF LQAMEEYVKD
301: APQGPIVRKD QAIENKEVLA IEYKKTTEVE EECPPSPSPS PPPPPPSEPV KVEAPPVQPP PDLLNLEDPV PAAAELEEKN ALALAIVPVA VEQQPSAVSN
401: QANGTTGWEL ALVTAPSSNE SATTASKLAG GLDKLTLDSL YDDALRRNNQ NVSYNPWEPA PGGNMMQPTM HDPFFASNTV AAPPSVQMAS MSNQQQAFMY
501: QQQQQMMMAP QQQSVNPFGN PYGATAVHPY GSGMPVQSYN PYTGLI
101: LREVDPTFHE ELINYGRSRS HMLNMAHFKD DSSPNAWDYS AWVRTYALFL EERLECFRVL KYDIEADRPR TKDLDTAELL EQLPTLQQLL HRVIDCQPHG
201: AAVNNFVIQL ALSMVASESI KIYQAISDGT VNMVDKFFEM QRHDALKALD IYRRVGHQAE RLSEFYEICR NLDIGRGEKF IKVEQPPSSF LQAMEEYVKD
301: APQGPIVRKD QAIENKEVLA IEYKKTTEVE EECPPSPSPS PPPPPPSEPV KVEAPPVQPP PDLLNLEDPV PAAAELEEKN ALALAIVPVA VEQQPSAVSN
401: QANGTTGWEL ALVTAPSSNE SATTASKLAG GLDKLTLDSL YDDALRRNNQ NVSYNPWEPA PGGNMMQPTM HDPFFASNTV AAPPSVQMAS MSNQQQAFMY
501: QQQQQMMMAP QQQSVNPFGN PYGATAVHPY GSGMPVQSYN PYTGLI
001: MSGGGGSQSS LRRYLGAIKD TTTVSLAKVN SDYKELDIAI VKATNHVERP SKERYIRAIF MAISATRPRA DVAYCIHALA RRLSRTHNWA VALKTLIVIH
101: RALREVDQTF HEEVINYSRS RSHMLNMSHF KDDSGPNAWA YSAWVRFYAL FLEERLECFR VLKYDVEVDP PRTKDLDTPD LLEQLPALQE LLFRVLDCQP
201: EGAAVQNHII QLALSMVISE STKIYQALTD GIDNLVDKFF DMQRNDAVKA LDMYRRAVKQ AGRLSEFFEV CKSVNVGRGE RFIKIEQPPT SFLQAMEEYV
301: KEAPLAAGVK KEQVVEKLTA PKEILAIEYE IPPKVVEEKP ASPEPVKAEA EKPVEKQPDL LSMDDPAPMV SELEEKNALA LAIVPVSVEQ PHSTTDFTNG
401: NSTGWELALV TAPSSNEGAA ADSKLAGGLD KLTLDSLYED AIRVSQQQNR SYNPWEQNPV HNGHMMHQPF YASNGVAAPQ PFQMANQNHQ TFGYQHQNAG
501: MMMGPVQQPY QQQQQNMNNP FGNPFVSNGN PQQPQGYNPY PRYM
101: RALREVDQTF HEEVINYSRS RSHMLNMSHF KDDSGPNAWA YSAWVRFYAL FLEERLECFR VLKYDVEVDP PRTKDLDTPD LLEQLPALQE LLFRVLDCQP
201: EGAAVQNHII QLALSMVISE STKIYQALTD GIDNLVDKFF DMQRNDAVKA LDMYRRAVKQ AGRLSEFFEV CKSVNVGRGE RFIKIEQPPT SFLQAMEEYV
301: KEAPLAAGVK KEQVVEKLTA PKEILAIEYE IPPKVVEEKP ASPEPVKAEA EKPVEKQPDL LSMDDPAPMV SELEEKNALA LAIVPVSVEQ PHSTTDFTNG
401: NSTGWELALV TAPSSNEGAA ADSKLAGGLD KLTLDSLYED AIRVSQQQNR SYNPWEQNPV HNGHMMHQPF YASNGVAAPQ PFQMANQNHQ TFGYQHQNAG
501: MMMGPVQQPY QQQQQNMNNP FGNPFVSNGN PQQPQGYNPY PRYM
Arabidopsis Description
Putative clathrin assembly protein At5g35200 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHS0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.