Factsheet for Zm00001d052008_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31293	Sorghum	cytosol	85.9	86.36
Os02t0803300-01	Rice	cytosol	75.05	72.94
Zm00001d037484_P002	Maize	cytosol, mitochondrion	65.46	65.7
TraesCS6D01G354100.2	Wheat	cytosol	67.09	62.67
TraesCS6A01G370500.1	Wheat	cytosol	65.82	62.54
HORVU6Hr1G087330.4	Barley	cytosol	65.64	62.37
TraesCS6B01G407500.2	Wheat	cytosol	66.55	62.27
GSMUA_Achr6P03060_001	Banana	cytosol	61.48	62.16
VIT_11s0016g05900.t01	Wine grape	cytosol	56.78	61.81
GSMUA_Achr5P23570_001	Banana	cytosol	59.31	60.18
CDY41768	Canola	cytosol, mitochondrion	42.68	59.3
Zm00001d045154_P002	Maize	mitochondrion	64.01	59.2
KRH03643	Soybean	mitochondrion	58.59	59.12
KRH20163	Soybean	cytosol	58.23	58.97
Solyc07g007820.2.1	Tomato	cytosol	59.86	58.79
CDY71126	Canola	cytosol, mitochondrion	45.21	58.69
AT5G35200.2	Thale cress	cytosol	54.61	55.51
CDY12401	Canola	cytosol, mitochondrion	53.89	55.19
Bra038937.1-P	Field mustard	mitochondrion	54.43	54.73
PGSC0003DMT400017184	Potato	cytosol	42.5	54.52
Zm00001d038892_P001	Maize	mitochondrion	45.93	45.12
Zm00001d015430_P001	Maize	cytosol	44.85	42.98
Zm00001d036672_P005	Maize	cytosol	43.4	41.74
Zm00001d009452_P007	Maize	cytosol, mitochondrion, plastid	42.31	40.21
Zm00001d043773_P003	Maize	cytosol	43.58	38.44
Zm00001d046121_P001	Maize	cytosol	17.36	26.45
Zm00001d030399_P001	Maize	cytosol	16.09	25.43
Zm00001d047804_P001	Maize	plasma membrane	28.21	24.61
Zm00001d028620_P001	Maize	plasma membrane	28.03	24.26
Zm00001d010228_P001	Maize	cytosol	26.76	24.07
Zm00001d035652_P001	Maize	cytosol	25.14	23.28
Zm00001d012220_P001	Maize	cytosol, mitochondrion, nucleus, plastid	21.7	21.62
Zm00001d049990_P001	Maize	mitochondrion	13.74	19.59
Zm00001d005869_P001	Maize	mitochondrion	13.74	19.1
Zm00001d007272_P001	Maize	mitochondrion	11.21	15.7
Zm00001d049002_P001	Maize	mitochondrion	11.39	15.56
Zm00001d031760_P001	Maize	mitochondrion	13.2	14.84
Zm00001d047867_P001	Maize	cytosol	8.14	13.68

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	EntrezGene:103654165	MapMan:35.1	UniProt:A0A1D6QBX5	InterPro:ANTH_dom
ProteinID:AQK55741.1	InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136
GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651
PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF29	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009
UniParc:UPI000844A4FB	EnsemblPlantsGene:Zm00001d052008	EnsemblPlants:Zm00001d052008_P003	EnsemblPlants:Zm00001d052008_T003	SEG:seg	:

Description

Putative clathrin assembly protein

Coordinates

chr4:-:176339769..176344984

Molecular Weight (calculated)

61237.7 Da

IEP (calculated)

5.348

GRAVY (calculated)

-0.336

Length

553 amino acids

Sequence
(BLAST)

001: MAGGGTGIRK YMGALKDTTT VSIAKVNSDY KELDIAIVKA TNHVENPTKE KYVRDIFYHL SPGRPRADVA YCIRALGRRL SKTRNWAVAM KTLIVIHRAL
101: REVDPAFREE LISYGRSSSH MLYLSYFKDD SSAEAWDYSA WVRNYALYLE EKLESFRVLN YDVEKDPLVC SLIQFYNICV LNLVVQIRDL DTNGLLDQLP
201: ALQQLLFRLL GCQVALESVR IQTAINDGIL NLVDKFFEMQ RDDAIRALGM YRRAIEQAEQ LSEFYEVCKS IHIGRGERFL KIEQPPASFL ATMEEYVSNA
301: PLASTVQRNQ AVLAIEDSKK SEVEESQPTL PPPHSPAQES GPEPVQQVPP AADPTDLLGI NEPTPATSEI DQKNAGALAM VPQDNAPKAP ASTTSSGSVE
401: TSWELALVTA PSSNGTAVTP SKLAGGLDLL TLDSLYNEAH RRAQQNASYN PWETNPASGP VMQQQMYDPF YASNHPVAAA RNVQMAAMEQ QQQQQHAFVL
501: QQQQQQQMIV MMMAQQQQQQ ASSNPLYTAA AAHTYGAGVQ LHAGNAYSGA GMM

Best Arabidopsis Sequence Match ( AT1G14910.1 )
(BLAST)

001: MGTLQSWRRA YGALKDTTKV GLVRVNSDYA ELDVAIVKAT NHVECPPKDR HLRKIFLATS AIRPRADVAY CIHALSRRLH KTRNWTVALK ALLVIHRLLR
101: DGDPTFREEL LNFSQKGRIM QISNFKDDSS PVAWDCSGWV RTYALFLEER LECFRVLKYD IEAERLPKVS PGQEKGYSKT RDLDGEKLLE QLPALQQLLH
201: RLIGCKPEGA AKHNHIIQYA LSLVLKESFK VYCAINEGII NLVEKFFEMP RHEAIKALEI YKRAGLQAGN LSAFYEVCKG LELARNFQFP VLREPPQSFL
301: TTMEEYMRDA PQMVDVTSGP LLLTYTPDDG LTSEDVGPSH EEHETSSPSD SAVVPSEETQ LSSQSPPSVE TPQNFIDTDD LLGLHDDTPD PLAILDQNAL
401: ALALVSNDVD SSPFSFGQAR DLDPSGWELA LVTTPSNDIS AATERQLAGG LDTLTLNSLY DDGALRAAQQ PAYGVPASNP FEVQDLFAFS DSVSPPSAVN
501: NPFGLYEPTY HQQEQQPQLQ VAPSPANPFG DFGEFPIVPV SEPQSTTSFG AFPVPVSEPS NTTGFGEIPV VPVTEPPNTT AFGEFPVVPV SEPQNITGFG
601: ALPVTPASEP SNTTGFGEFP VVSVSAPQNT TGFGALPVIP VSEPSKTTGL GEFPVVPVSE PQNTTGFGEF PVNAGAHEQH NSNNPFGSTG FL

Arabidopsis Description

Putative clathrin assembly protein At1g14910 [Source:UniProtKB/Swiss-Prot;Acc:P94017]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.