Factsheet for Zm00001d037484_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19435	Sorghum	cytosol, mitochondrion	96.91	94.68
Zm00001d045154_P002	Maize	mitochondrion	94.01	86.62
HORVU7Hr1G028590.1	Barley	cytosol	85.66	83.54
TraesCS7A01G138400.1	Wheat	cytosol	85.48	83.51
TraesCS7B01G040500.1	Wheat	cytosol	85.3	83.33
TraesCS7D01G140200.1	Wheat	cytosol	85.12	83.16
Os06t0175500-01	Rice	plasma membrane	85.48	82.63
GSMUA_Achr6P03060_001	Banana	cytosol	72.23	72.76
GSMUA_Achr5P23570_001	Banana	cytosol	70.42	71.19
KRH20163	Soybean	cytosol	68.97	69.6
VIT_11s0016g05900.t01	Wine grape	cytosol	64.07	69.49
KRH03643	Soybean	mitochondrion	68.78	69.16
Solyc07g007820.2.1	Tomato	cytosol	69.51	68.03
CDY71126	Canola	cytosol, mitochondrion	52.09	67.37
CDY41768	Canola	cytosol, mitochondrion	48.64	67.34
Zm00001d052008_P003	Maize	cytosol	65.7	65.46
PGSC0003DMT400017184	Potato	cytosol	50.45	64.5
AT5G35200.2	Thale cress	cytosol	62.98	63.79
CDY12401	Canola	cytosol, mitochondrion	61.89	63.15
Bra038937.1-P	Field mustard	mitochondrion	62.61	62.73
Zm00001d038892_P001	Maize	mitochondrion	49.18	48.13
Zm00001d036672_P005	Maize	cytosol	46.82	44.87
Zm00001d015430_P001	Maize	cytosol	46.82	44.71
Zm00001d009452_P007	Maize	cytosol, mitochondrion, plastid	45.19	42.78
Zm00001d043773_P003	Maize	cytosol	47.91	42.11
Zm00001d046121_P001	Maize	cytosol	20.51	31.13
Zm00001d030399_P001	Maize	cytosol	19.06	30.0
Zm00001d047804_P001	Maize	plasma membrane	31.76	27.6
Zm00001d010228_P001	Maize	cytosol	30.49	27.32
Zm00001d028620_P001	Maize	plasma membrane	31.58	27.23
Zm00001d035652_P001	Maize	cytosol	27.95	25.8
Zm00001d049990_P001	Maize	mitochondrion	16.7	23.71
Zm00001d012220_P001	Maize	cytosol, mitochondrion, nucleus, plastid	22.5	22.34
Zm00001d005869_P001	Maize	mitochondrion	15.61	21.61
Zm00001d007272_P001	Maize	mitochondrion	12.7	17.72
Zm00001d049002_P001	Maize	mitochondrion	12.7	17.28
Zm00001d031760_P001	Maize	mitochondrion	15.43	17.28
Zm00001d047867_P001	Maize	cytosol	9.62	16.11

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	EntrezGene:100501232	MapMan:35.1	UniProt:A0A1D6LY69	InterPro:ANTH_dom
ProteinID:AQK84087.1	ProteinID:AQK84088.1	ProteinID:AQK84090.1	InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987
GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942	InterPro:IPR013809
InterPro:IPR014712	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF32	SMART:SM00273
SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI000221E624	EnsemblPlantsGene:Zm00001d037484	EnsemblPlants:Zm00001d037484_P002	EnsemblPlants:Zm00001d037484_T002
SEG:seg	:	:	:	:	:

Description

Putative clathrin assembly protein

Coordinates

chr6:-:126845417..126851385

Molecular Weight (calculated)

61020.9 Da

IEP (calculated)

5.192

GRAVY (calculated)

-0.324

Length

551 amino acids

Sequence
(BLAST)

001: MAVGGTQPVL RKYLGALKDT TTVSLAKVNS DYKELDIAIV KATNHVERPS KEKYIREIFH SISAARPRAD VAYCIHALAR RLSKTRNWAV ALKTLIVIHR
101: ALREVDPTFR EELISYGRSR SHMLNMAYFK DDSSAEAWDY SAWVRIYALY LEERLECFRV LKYDVETDPP RTKDLDTVAL LDHLPSLQQL LFRLLACQPQ
201: GASSYNVIIQ HALSMVALES IKIYTAISDG TINLVDKFFE MQRNDAVRAL DVYKRATNQA ERLSEFYEVC KTIHIGRGEK FLKIEQPPAS FLNTMEEYVR
301: DAPTGQKEKA ILAIEYKKEP EEEEKPSSPP AAPEPEPEQV PEPEPEPVKE EAPEAEPDLL GLNEPNPAAT AIEEQNALAL AIVPIDDAPK AAPTFGNGVT
401: GWELALVTAP SSNETAVAPS KKLAGGLDLL TLDSLYDEAN RRASQPASYN PWEATPAAPA PMMTMAPVMH DPFYASNGYA APHGVQMAAM AQQQQAFMLQ
501: QQQMMTMAPA QPVVHHPMQM QQNPANPFGN PFAAAGMPLH AGPGNVYTGL I

Best Arabidopsis Sequence Match ( AT5G35200.1 )
(BLAST)

001: MSGGGGSQSS LRRYLGAIKD TTTVSLAKVN SDYKELDIAI VKATNHVERP SKERYIRAIF MAISATRPRA DVAYCIHALA RRLSRTHNWA VALKTLIVIH
101: RALREVDQTF HEEVINYSRS RSHMLNMSHF KDDSGPNAWA YSAWVRFYAL FLEERLECFR VLKYDVEVDP PRTKDLDTPD LLEQLPALQE LLFRVLDCQP
201: EGAAVQNHII QLALSMVISE STKIYQALTD GIDNLVDKFF DMQRNDAVKA LDMYRRAVKQ AGRLSEFFEV CKSVNVGRGE RFIKIEQPPT SFLQAMEEYV
301: KEAPLAAGVK KEQVVEKLTA PKEILAIEYE IPPKVVEEKP ASPEPVKAEA EKPVEKQPDL LSMDDPAPMV SELEEKNALA LAIVPVSVEQ PHSTTDFTNG
401: NSTGWELALV TAPSSNEGAA ADSKLAGGLD KLTLDSLYED AIRVSQQQNR SYNPWEQNPV HNGHMMHQPF YASNGVAAPQ PFQMANQNHQ TFGYQHQNAG
501: MMMGPVQQPY QQQQQNMNNP FGNPFVSNGN PQQPQGYNPY PRYM

Arabidopsis Description

Putative clathrin assembly protein At5g35200 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHS0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.