Factsheet for Zm00001d030399_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046121_P001	Maize	cytosol	85.14	82.09
Zm00001d047804_P001	Maize	plasma membrane	92.57	51.1
TraesCS4D01G208100.1	Wheat	cytosol, mitochondrion, plastid	81.71	51.07
Zm00001d028620_P001	Maize	plasma membrane	90.0	49.3
EER92480	Sorghum	cytosol, mitochondrion, plastid	90.57	49.15
TraesCS4B01G207200.1	Wheat	cytosol, mitochondrion, plastid	88.57	48.59
TraesCS4A01G097200.1	Wheat	cytosol, mitochondrion, plastid	88.29	48.43
GSMUA_Achr9P03950_001	Banana	cytosol, mitochondrion, plastid	72.86	48.39
Os03t0275500-01	Rice	plasma membrane	89.14	47.93
HORVU4Hr1G059660.3	Barley	cytosol, mitochondrion, plastid	87.71	47.52
CDX76977	Canola	cytosol	62.29	41.76
CDY35361	Canola	cytosol	68.29	40.44
CDX76976	Canola	cytosol	68.29	40.3
CDX75232	Canola	cytosol	67.71	39.97
CDX68831	Canola	cytosol	67.43	39.93
CDX76760	Canola	cytosol	53.14	39.83
CDY11530	Canola	cytosol	65.43	39.48
KRH52429	Soybean	endoplasmic reticulum	71.14	38.85
Solyc06g011450.1.1	Tomato	cytosol	67.71	38.6
Bra011333.1-P	Field mustard	cytosol	68.0	37.96
Solyc08g059660.1.1	Tomato	cytosol	68.86	37.89
PGSC0003DMT400035762	Potato	cytosol	69.14	37.87
Bra007800.1-P	Field mustard	cytosol	66.29	37.85
KRH61760	Soybean	mitochondrion	69.71	37.42
PGSC0003DMT400040963	Potato	cytosol	68.0	37.13
VIT_04s0008g05540.t01	Wine grape	cytosol	70.29	37.1
AT4G32285.2	Thale cress	cytosol	66.86	36.85
Bra034252.1-P	Field mustard	cytosol	68.29	36.83
AT2G25430.1	Thale cress	cytosol	68.57	36.75
VIT_11s0016g05480.t01	Wine grape	cytosol	65.14	36.02
PGSC0003DMT400079380	Potato	cytosol, mitochondrion, plastid	60.57	34.42
GSMUA_Achr6P33420_001	Banana	cytosol, mitochondrion, plastid	61.71	34.18
GSMUA_Achr11P...	Banana	cytosol	44.29	33.99
Solyc07g008060.1.1	Tomato	cytosol	59.43	33.88
KRH20132	Soybean	cytosol	58.86	33.66
Zm00001d035652_P001	Maize	cytosol	51.43	30.15
Zm00001d047867_P001	Maize	cytosol	21.43	22.8
Zm00001d010228_P001	Maize	cytosol	39.14	22.28
Zm00001d012220_P001	Maize	cytosol, mitochondrion, nucleus, plastid	34.57	21.8
Zm00001d037484_P002	Maize	cytosol, mitochondrion	30.0	19.06
Zm00001d038892_P001	Maize	mitochondrion	30.0	18.65
Zm00001d036672_P005	Maize	cytosol	29.43	17.91
Zm00001d045154_P002	Maize	mitochondrion	30.0	17.56
Zm00001d049990_P001	Maize	mitochondrion	18.57	16.75
Zm00001d052008_P003	Maize	cytosol	25.43	16.09
Zm00001d009452_P007	Maize	cytosol, mitochondrion, plastid	26.57	15.98
Zm00001d015430_P001	Maize	cytosol	26.29	15.94
Zm00001d043773_P003	Maize	cytosol	28.29	15.79
Zm00001d049002_P001	Maize	mitochondrion	17.71	15.31
Zm00001d007272_P001	Maize	mitochondrion	16.57	14.68
Zm00001d031760_P001	Maize	mitochondrion	19.43	13.82
Zm00001d005869_P001	Maize	mitochondrion	15.43	13.57
KRH05593	Soybean	cytosol	3.14	12.79

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	UniProt:A0A1D6KCF1	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2
InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543
GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268
InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	ProteinID:ONM00944.1	PFAM:PF07651	PFscan:PS50942
PANTHER:PTHR22951	PANTHER:PTHR22951:SF13	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI0008430EC4	EnsemblPlantsGene:Zm00001d030399
EnsemblPlants:Zm00001d030399_P001	EnsemblPlants:Zm00001d030399_T001	SEG:seg	:	:	:

Description

Putative clathrin assembly protein

Coordinates

chr1:-:129316518..129317607

Molecular Weight (calculated)

39624.9 Da

IEP (calculated)

4.927

GRAVY (calculated)

-0.479

Length

350 amino acids

Sequence
(BLAST)

001: MLVHRLLVDG DSSFHRELLH GTRRGTRLLN LSDFWDEAHS GSWDHSAFVR TYALYLDQRL EFFLHERKQG FLDRFLACRP TGGAKQSRLV LVALYQIVRE
101: SFQLYSDICE VLAVLLDRFF DMEYAECVKA FEAYASAAKQ IDELSAFYAW CKDSGVARSS EYPEVQHVTD KLLETLEKFM RDRAKRPKSP PREPEPEPVK
201: EEPEPDMNSI KALPAPEDYK EPEPMKVEEE VKPEPPPQPQ GDLVDLREHT VSADEQGNRL ALALFQGPPA ASGNNGSWEA FPSNGGNEVT SAWQNPAAEP
301: GKADWELALV ETASNLSMQK PAMSGGMDPL LLKMHFIVVT LFNISYHRIK

Best Arabidopsis Sequence Match ( AT4G32285.2 )
(BLAST)

001: MALSMRKAIG VVKDQTSIGI AKVASNMAPD LEVAIVKATS HDDDQSSDKY IREILSLTSL SRGYVHACVT SVSRRLKKTR DWIVALKALM LVHRLLNEGD
101: PLFQEEILYA TRRGTRILNM SDFRDEAHSS SWDHSAFVRT YASYLDQRLE LALFERRGRN GGGSSSSHQS NGDDGYNRSR DDFRSPPPRT YDYETGNGFG
201: MPKRSRSFGD VNEIGAREEK KSVTPLREMT PERIFGKMGH LQRLLDRFLS CRPTGLAKNS RMILIAMYPV VKESFRLYAD ICEVLAVLLD KFFDMEYTDC
301: VKAFDAYASA AKQIDELIAF YHWCKDTGVA RSSEYPEVQR ITSKLLETLE EFVRDRAKRA KSPERKEIEA PPAPAPPVEE PVDMNEIKAL PPPENHTPPP
401: PPAPEPKPQQ PQVTDDLVNL REDDVSGDDQ GNKFALALFA GPPANNGKWE AFSSDNNVTS AWQNPAAELG KADWELALVE TASNLEHQKA AMGGGLDPLL
501: LNGMYDQGAV RQHVSTSELT GGSSSSVALP LPGKVNSHIL ALPAPDGTVQ KVNQDPFAAS LTIPPPSYVQ MAEMDKKQYL LTQEQQLWQQ YQQEGMRGQA
601: SLAKMNTAQT AMPYGMPPVN GMGPSPMGYY YNNPY

Arabidopsis Description

Probable clathrin assembly protein At4g32285 [Source:UniProtKB/Swiss-Prot;Acc:Q8S9J8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.