Factsheet for HORVU4Hr1G059660.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
MultiLoc:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G208100.1	Wheat	cytosol, mitochondrion, plastid	84.83	97.86
TraesCS4B01G207200.1	Wheat	cytosol, mitochondrion, plastid	96.59	97.81
TraesCS4A01G097200.1	Wheat	cytosol, mitochondrion, plastid	95.98	97.18
EER92480	Sorghum	cytosol, mitochondrion, plastid	89.78	89.92
Os03t0275500-01	Rice	plasma membrane	90.56	89.86
Zm00001d028620_P001	Maize	plasma membrane	88.7	89.67
Zm00001d047804_P001	Maize	plasma membrane	87.93	89.59
Zm00001d030399_P001	Maize	cytosol	47.52	87.71
Zm00001d046121_P001	Maize	cytosol	49.07	87.33
GSMUA_Achr9P03950_001	Banana	cytosol, mitochondrion, plastid	58.2	71.35
CDX76976	Canola	cytosol	63.47	69.14
CDY35361	Canola	cytosol	63.16	69.04
CDY11530	Canola	cytosol	60.68	67.59
CDX68831	Canola	cytosol	61.3	67.01
CDX75232	Canola	cytosol	61.46	66.95
KRH52429	Soybean	endoplasmic reticulum	65.33	65.83
Bra007800.1-P	Field mustard	cytosol	62.07	65.42
PGSC0003DMT400035762	Potato	cytosol	64.55	65.26
KRH61760	Soybean	mitochondrion	65.63	65.03
Solyc08g059660.1.1	Tomato	cytosol	63.62	64.62
Bra034252.1-P	Field mustard	cytosol	64.86	64.56
VIT_04s0008g05540.t01	Wine grape	cytosol	66.1	64.4
Bra011333.1-P	Field mustard	cytosol	62.38	64.27
AT2G25430.1	Thale cress	cytosol	64.86	64.17
CDX76977	Canola	cytosol	51.7	63.98
PGSC0003DMT400040963	Potato	cytosol	63.47	63.96
Solyc06g011450.1.1	Tomato	cytosol	59.75	62.87
CDX76760	Canola	cytosol	45.36	62.74
AT4G32285.2	Thale cress	cytosol	61.15	62.2
GSMUA_Achr11P...	Banana	cytosol	43.81	62.06
VIT_11s0016g05480.t01	Wine grape	cytosol	60.68	61.93
PGSC0003DMT400079380	Potato	cytosol, mitochondrion, plastid	57.28	60.06
Solyc07g008060.1.1	Tomato	cytosol	56.19	59.12
GSMUA_Achr6P33420_001	Banana	cytosol, mitochondrion, plastid	57.12	58.39
KRH20132	Soybean	cytosol	54.18	57.19
HORVU1Hr1G005290.1	Barley	cytosol	51.39	53.72
KRH05593	Soybean	cytosol	6.35	47.67
HORVU1Hr1G065590.1	Barley	cytosol	42.41	45.21
HORVU0Hr1G000720.3	Barley	cytosol	42.11	44.88
HORVU7Hr1G028590.1	Barley	cytosol	28.95	33.1
HORVU7Hr1G109970.5	Barley	cytosol	27.71	31.29
HORVU7Hr1G097510.7	Barley	mitochondrion	23.22	29.35
HORVU1Hr1G078340.3	Barley	plastid	28.64	29.23
HORVU6Hr1G030980.1	Barley	cytosol	27.4	28.59
HORVU6Hr1G087330.4	Barley	cytosol	25.08	27.84
HORVU4Hr1G015050.1	Barley	mitochondrion	13.31	21.77
HORVU5Hr1G078270.1	Barley	cytosol	14.71	21.54
HORVU7Hr1G089710.1	Barley	mitochondrion	5.73	20.9

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.4.6	UniProt:A0A287P8L2	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2
InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543
GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268
EnsemblPlantsGene:HORVU4Hr1G059660	EnsemblPlants:HORVU4Hr1G059660.3	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651
PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF13	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009
UniParc:UPI000B47FA3D	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:499197838..499199886

Molecular Weight (calculated)

71718.4 Da

IEP (calculated)

5.261

GRAVY (calculated)

-0.617

Length

646 amino acids

Sequence
(BLAST)

001: MSSSTIRKAL GAVKDQTSIG LAKVTSNIAP ELDVLIVKTT SHDDEPAEER HIREILHLTS GSRAHVAAAV AGCARRLSRT RDYVVALKSL MLVHRLLTDG
101: DPFFHRELLH ATRRGTRLLN LSDFRDEAHS GSWDHSAFVR TYALYLDQRL EFLLHERKQG SNANGSTSLN GPSPRDRWGS PDPYGRRSPS YTSPPGNGYG
201: GYDDNRERNG GNSDDKRPLT PVRDMKPERV LGRMHHLQQL LDRFLACRPT GGAKQSRMVL VALYQMARES FQLYADICEV LAVLLDRFFD MEYADCVKAF
301: EAYASAAKQI DELCSFYAWC KDTGVARSSE YPEVQRVTDK LLETLEEFMR DRAKRPKSPP REPEPEPVKE EEPEPEDMNS IKALPAPEDY KEPEPEKVEE
401: EVKPEPPPQP QGDLVDLRED TVSADEQGNR LALALFQGPP AAGGSNGSWE AFPSNGANEV TSAWQNPAAE PGKADWELAL VETASNLSKQ KAVMTGGMDN
501: LLLNGMYDQG VVRQHVNAQA TSGSSSSVAL PAPGQKTQML ALPAPDGSMQ NVGGDPFAAS LTFAPPSYVQ MAEMEKKQQF LTQEQMMWQQ YQRDGMQGPS
601: SLAKLDRTYN NGFGPNPAMP YGMPNAPMHQ LLCPWSLDQT FWSLIY

Best Arabidopsis Sequence Match ( AT2G25430.1 )
(BLAST)

001: MAPSIRKAIG AVKDQTSIGI AKVASNMAPD LEVAIVKATS HDDDPASEKY IREILNLTSL SRGYILACVT SVSRRLSKTR DWVVALKALM LVHRLLNEGD
101: PIFQEEILYS TRRGTRMLNM SDFRDEAHSS SWDHSAFVRT YAGYLDQRLE LALFERKSGV SVNSGGNSSH HSNNDDRYGR GRDDFRSPPP RSYDYENGGG
201: GGSDFRGDNN GYGGVPKRSR SYGDMTEMGG GGGGGGRDEK KVVTPLREMT PERIFGKMGH LQRLLDRFLS LRPTGLAKNS RMILIALYPV VRESFKLYAD
301: ICEVLAVLLD KFFDMEYSDC VKAFDAYASA AKQIDELIAF YNWCKETGVA RSSEYPEVQR ITSKLLETLE EFVRDRAKRG KSPERKEIEA PPPVVEEEEP
401: EPDMNEIKAL PPPENYTPPP PPEPEPQPEK PQFTEDLVNL REDEVTADDQ GNKFALALFA GPPGNNGKWE AFSSNGVTSA WQNPAAEPGK ADWELALVET
501: TSNLEKQTAA LGGGFDNLLL NGMYDQGMVR QHVSTSQLTG GSASSVALPL PGKTNNQVLA LPAPDGTVEK VNQDPFAASL TIPPPSYVQM AEMEKKQYLL
601: SQEQQLWQQY QRDGMRGQAS LAKMNTGPVP AYGMPPVNGM GPPPTGYYYN NPY

Arabidopsis Description

Putative clathrin assembly protein At2g25430 [Source:UniProtKB/Swiss-Prot;Acc:Q8LF20]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.