Factsheet for HORVU7Hr1G109970.5

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
Predotar:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G393800.2	Wheat	cytosol	92.31	92.63
TraesCS7A01G490500.2	Wheat	cytosol	92.31	91.99
TraesCS7D01G476900.2	Wheat	cytosol	93.01	91.88
Os06t0661400-01	Rice	cytosol	38.29	87.6
KXG20534	Sorghum	cytosol, mitochondrion	80.42	79.31
Zm00001d036672_P005	Maize	cytosol	79.37	78.96
Solyc12g017440.1.1	Tomato	cytosol	34.62	66.22
GSMUA_Achr7P04960_001	Banana	cytosol	61.36	63.82
CDY42239	Canola	cytosol	37.41	63.5
GSMUA_Achr1P15690_001	Banana	cytosol	61.01	62.43
GSMUA_Achr4P20660_001	Banana	cytosol	59.44	61.04
HORVU6Hr1G030980.1	Barley	cytosol	65.03	60.1
KRH02791	Soybean	cytosol	56.99	56.79
PGSC0003DMT400036570	Potato	cytosol	55.59	55.5
VIT_11s0103g00620.t01	Wine grape	cytosol	57.17	55.33
KRH37330	Soybean	cytosol	57.52	55.2
KRH12315	Soybean	cytosol	57.52	55.2
KRH19094	Soybean	cytosol	55.07	54.88
Solyc02g043810.2.1	Tomato	cytosol	55.42	54.84
CDY52732	Canola	cytosol	54.55	53.33
CDY38276	Canola	cytosol	54.9	53.04
Bra002750.1-P	Field mustard	cytosol	54.72	52.78
AT5G57200.1	Thale cress	cytosol	54.37	52.62
Bra020460.1-P	Field mustard	cytosol	54.2	52.19
CDY47927	Canola	cytosol	45.8	51.88
AT4G25940.1	Thale cress	cytosol	53.67	51.08
Bra013934.1-P	Field mustard	cytosol	52.62	50.08
CDX94400	Canola	cytosol	52.1	50.0
CDX89382	Canola	cytosol	52.45	49.92
HORVU1Hr1G078340.3	Barley	plastid	54.02	48.82
HORVU7Hr1G097510.7	Barley	mitochondrion	43.36	48.53
HORVU7Hr1G028590.1	Barley	cytosol	43.71	44.25
HORVU6Hr1G087330.4	Barley	cytosol	42.13	41.41
Solyc12g017430.1.1	Tomato	nucleus	14.51	39.15
PGSC0003DMT400025029	Potato	nucleus	18.01	36.27
HORVU4Hr1G059660.3	Barley	cytosol, mitochondrion, plastid	31.29	27.71
HORVU1Hr1G065590.1	Barley	cytosol	27.62	26.07
HORVU0Hr1G000720.3	Barley	cytosol	27.62	26.07
HORVU1Hr1G005290.1	Barley	cytosol	28.15	26.05
HORVU4Hr1G015050.1	Barley	mitochondrion	14.34	20.76
HORVU7Hr1G089710.1	Barley	mitochondrion	5.94	19.21
HORVU5Hr1G078270.1	Barley	cytosol	13.64	17.69

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.6.2	UniProt:A0A287XT26	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2
InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543
GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268
EnsemblPlantsGene:HORVU7Hr1G109970	EnsemblPlants:HORVU7Hr1G109970.5	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651
PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF21	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009
UniParc:UPI000B478A55	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:629237415..629242346

Molecular Weight (calculated)

64465.4 Da

IEP (calculated)

4.970

GRAVY (calculated)

-0.438

Length

572 amino acids

Sequence
(BLAST)

001: MGSGTWRKAY GALKDSTKVG LANFNSEYKD LDIAIVKATN HVECPPKERH FRRIMFSTSV NRPRADVAYS ICTLARRLSK TKNWIVALKT LIVIHRLLRE
101: GDGTFKDDFL SYSYRGNILQ LPNFRDDSSP LAWDCSAWVR LYAFYLHERV ECFRILKYDV EADRLMKLPQ ASGKAHSRTR TLPCADLLDQ LPALQKLLLR
201: LISCQPESAA CTNHLVQYAL ALVLKESFKI YCSINDGIIN LVDMYFDMAK TDAIKALEIY KRAGQQAEKL SAYYDYCKHL ELARTFQFPT LRQPPSSFLV
301: TMEEYIREAP RVSITRKSAS SPSDHEDEAP LEAEKPVEEE KEEPAEPAPE EEPQYIALSE EDEPPPLPPT TGDLLNLDEE LHPMIADLEQ SNALALAIVE
401: PGSENNASAP LDLFAMDKAG WEMALVTAPS NHTSQPAVSQ LQPGGFDKLL LDSLYEDEAR RQQIASVTYT GGVTVNPFDP NDPFAMSNSF APPSNVQFAM
501: MGQQQQYYQA PQHDYFQMQQ QQHQMMSMPP PQTYQQQQAQ YAVNAGLSNP FGDPFSALVT MANPPKQNNL QI

Best Arabidopsis Sequence Match ( AT5G57200.1 )
(BLAST)

001: MGTFTSFRKA YGALKDTTTV GLAKVNSEFK DLDIAIVKAT NHVESPPKER HVRKIFSATS VIQPRADVAY CIHALSKRLS KTRNWVVAMK VLIVIHRTLR
101: EGDPTFREEL LNYSHRRHIL RISNFKDDTS PLAWDCSAWV RTYALFLEER LECYRVLKYD IEAERLPKAS GAASKTHRTR MLSGEDLLEQ LPALQQLLYR
201: LIGCQPEGAA YSNYLIQYAL ALVLKESFKI YCAINDGIIN LVDMFFEMSR HDAVKALNIY KRAGQQAENL AEFYDYCKGL ELARNFQFPT LRQPPPSFLA
301: TMEEYIKEAP QSGSVQKKLE YQEKEEEEQE QEEEQPEEPA EEENQNENTE NDQPLIEEEE EEPKEEIEVE EAKPSPLIDT DDLLGLHEIN PKAAEIEQNN
401: AFSLAIYPPG HETSAPSNSL SLIEAGGSGW ELALVTPQNN NNNNNNPRPV IATKLGGGFD NLLLDSLYED DTARRQIQLT NAGYGFGATA IPGALASSNP
501: NPFGVQQDPF AMSNNMAPPT NVQMAMQQQQ MMMMNNQSPY NNNYSPYHHH QFSPNPSTSS SPNPFGDPFL ALPAPPSSTT QQQYSPNHML L

Arabidopsis Description

Putative clathrin assembly protein At5g57200 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.