CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH37330	Soybean	cytosol	91.28	91.28
KRH02791	Soybean	cytosol	74.66	77.53
CDY42239	Canola	cytosol	43.62	77.15
KRH19094	Soybean	cytosol	73.49	76.31
Os06t0661400-01	Rice	cytosol	29.7	70.8
VIT_11s0103g00620.t01	Wine grape	cytosol	70.13	70.73
CDY52732	Canola	cytosol	65.94	67.18
AT5G57200.1	Thale cress	cytosol	66.61	67.17
GSMUA_Achr7P04960_001	Banana	cytosol	61.91	67.09
CDY38276	Canola	cytosol	66.44	66.89
Bra002750.1-P	Field mustard	cytosol	66.11	66.44
Bra020460.1-P	Field mustard	cytosol	65.27	65.49
AT4G25940.1	Thale cress	cytosol	65.94	65.39
Solyc02g043810.2.1	Tomato	cytosol	63.26	65.22
CDY47927	Canola	cytosol	55.2	65.15
PGSC0003DMT400036570	Potato	cytosol	62.25	64.75
GSMUA_Achr1P15690_001	Banana	cytosol	59.9	63.86
CDX94400	Canola	cytosol	63.76	63.76
Bra013934.1-P	Field mustard	cytosol	64.09	63.56
GSMUA_Achr4P20660_001	Banana	cytosol	59.4	63.55
CDX89382	Canola	cytosol	63.93	63.39
GSMUA_Achr3P05590_001	Banana	cytosol	54.7	59.71
Zm00001d036672_P005	Maize	cytosol	57.38	59.48
KXG20534	Sorghum	cytosol, mitochondrion	57.55	59.14
KRH58627	Soybean	nucleus	55.87	58.52
EES06356	Sorghum	cytosol	55.87	58.42
KRH42533	Soybean	cytosol	55.54	58.27
KXG20765	Sorghum	mitochondrion	54.87	57.57
HORVU7Hr1G109970.5	Barley	cytosol	55.2	57.52
Zm00001d015430_P001	Maize	cytosol	55.2	57.02
Os02t0175700-01	Rice	plasma membrane	55.7	56.95
TraesCS7B01G393800.2	Wheat	cytosol	54.19	56.67
TraesCS7A01G490500.2	Wheat	cytosol	54.53	56.62
TraesCS7D01G476900.2	Wheat	cytosol	54.87	56.48
KRH38239	Soybean	cytosol	52.35	56.32
TraesCS6B01G181800.1	Wheat	cytosol	53.52	55.29
Os06t0699800-00	Rice	cytosol	40.44	54.9
TraesCS6D01G143700.1	Wheat	cytosol	54.03	54.86
KRH03643	Soybean	mitochondrion	49.83	54.2
TraesCS7B01G430700.2	Wheat	cytosol	12.92	53.85
KRH20163	Soybean	cytosol	49.33	53.85
TraesCS6A01G154100.1	Wheat	cytosol	52.85	53.75
TraesCS7D01G414100.1	Wheat	mitochondrion	51.17	53.7
TraesCS7B01G322300.1	Wheat	mitochondrion	50.67	53.45
TraesCS7A01G421900.1	Wheat	mitochondrion	50.84	53.16
HORVU7Hr1G097510.7	Barley	mitochondrion	44.3	51.66
HORVU6Hr1G030980.1	Barley	cytosol	53.52	51.53
KRH54979	Soybean	cytosol	30.87	36.36
KRH05593	Soybean	cytosol	5.2	36.05
KRH10492	Soybean	cytosol, mitochondrion	29.7	29.7
KRH43936	Soybean	cytosol, mitochondrion	29.19	29.34
KRH58332	Soybean	mitochondrion	28.52	29.06
KRH41749	Soybean	cytosol	13.76	28.98
KRH20132	Soybean	cytosol	28.69	27.94
KRH52429	Soybean	endoplasmic reticulum	30.03	27.93
KRH61760	Soybean	mitochondrion	30.03	27.45
KRH60451	Soybean	mitochondrion	17.45	23.48
KRH09259	Soybean	cytosol, nucleus, peroxisome	16.78	23.26
KRH38757	Soybean	cytosol, nucleus, peroxisome	16.44	22.58
KRH58584	Soybean	mitochondrion	14.6	21.8
KRH42490	Soybean	cytosol	14.77	21.78
KRG89239	Soybean	cytosol, mitochondrion	13.09	20.31
KRH49763	Soybean	mitochondrion	12.92	19.79
KRH17907	Soybean	cytosol	20.81	16.99

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	EntrezGene:100786060	MapMan:22.1.6.2	EMBL:ACUP02009289	InterPro:ANTH_dom
InterPro:Clathrin_AP_dom2	ncoils:Coil	InterPro:ENTH	InterPro:ENTH_VHS	EnsemblPlantsGene:GLYMA_15G165800	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043
GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	UniProt:I1MH35	InterPro:IPR008942	InterPro:IPR013809
InterPro:IPR014712	EnsemblPlants:KRH12315	ProteinID:KRH12315	ProteinID:KRH12315.1	PFAM:PF07651	PFscan:PS50942
PANTHER:PTHR22951	PANTHER:PTHR22951:SF56	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI00023D1F3C
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:14417199..14423322

Molecular Weight (calculated)

68179.0 Da

IEP (calculated)

4.786

GRAVY (calculated)

-0.698

Length

596 amino acids

Sequence
(BLAST)

001: MGTFQSFRKA YGALKDSTKV GLAKVNSEYK ELDIAIVKAT NHVEYPPKER HVRKIFCATL AHQPRADVAY CIHKLAKRLS KTRSWIVAIK TLIVIHRTLR
101: EGDPTFREEI LNYSRRGHIL QISNFKDDSS PLAWDCSAWV RTYALFLEER LECFRVLKYD IESERLTKAS PVVNNVRSKT RSLDSDDLLE QLPALQQLLY
201: RLIGCQPEGC AYSNHLVQYA LALVLKESFK IYCTLNDGII NLVDVFFDMT RHDAVKALNI YKRAGQQAEN LADFYEYCKG LDLTRNFQFP TLRQPPPSFL
301: ATMEEYIKEA PQTGYVNKKV EYQENEESSK EESESNESAE PQANEEQVEE VNEEESVEEE EEQPKEEEVE PPPLISTDDG TNDLLGLNEI NPKAMELEES
401: NAMALAIVPP GGNNPNNLAL SNFDGTTGWE LSLVTTPSNH SSQAPDRRLA GGFDKLLLDS LYEDENARRQ LQLQNAGYGH SGTMDIQNNN PFDHYNQQDP
501: FAMSNNIAPP PSVQMALMSQ QQQQQQMMFQ QQQMMYQQAQ QQHNNMMMVP YHQQQPYNQY PQQMYNSSSH NPFGDPLPVP NYNHSSMPQQ GNYNLM

Best Arabidopsis Sequence Match ( AT5G57200.1 )
(BLAST)

001: MGTFTSFRKA YGALKDTTTV GLAKVNSEFK DLDIAIVKAT NHVESPPKER HVRKIFSATS VIQPRADVAY CIHALSKRLS KTRNWVVAMK VLIVIHRTLR
101: EGDPTFREEL LNYSHRRHIL RISNFKDDTS PLAWDCSAWV RTYALFLEER LECYRVLKYD IEAERLPKAS GAASKTHRTR MLSGEDLLEQ LPALQQLLYR
201: LIGCQPEGAA YSNYLIQYAL ALVLKESFKI YCAINDGIIN LVDMFFEMSR HDAVKALNIY KRAGQQAENL AEFYDYCKGL ELARNFQFPT LRQPPPSFLA
301: TMEEYIKEAP QSGSVQKKLE YQEKEEEEQE QEEEQPEEPA EEENQNENTE NDQPLIEEEE EEPKEEIEVE EAKPSPLIDT DDLLGLHEIN PKAAEIEQNN
401: AFSLAIYPPG HETSAPSNSL SLIEAGGSGW ELALVTPQNN NNNNNNPRPV IATKLGGGFD NLLLDSLYED DTARRQIQLT NAGYGFGATA IPGALASSNP
501: NPFGVQQDPF AMSNNMAPPT NVQMAMQQQQ MMMMNNQSPY NNNYSPYHHH QFSPNPSTSS SPNPFGDPFL ALPAPPSSTT QQQYSPNHML L

Arabidopsis Description

Putative clathrin assembly protein At5g57200 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.