CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42490	Soybean	cytosol	89.47	88.37
KRG89239	Soybean	cytosol, mitochondrion	54.39	56.51
KRH49763	Soybean	mitochondrion	53.63	55.01
VIT_01s0011g06370.t01	Wine grape	mitochondrion	46.37	48.05
PGSC0003DMT400058608	Potato	mitochondrion	46.87	46.75
Solyc01g005070.2.1	Tomato	mitochondrion	46.37	46.48
Bra024772.1-P	Field mustard	mitochondrion	43.11	45.62
CDY57160	Canola	mitochondrion	43.11	45.5
AT1G25240.2	Thale cress	mitochondrion	42.36	44.83
CDY60368	Canola	mitochondrion	42.36	44.71
Bra012491.1-P	Field mustard	mitochondrion	41.85	44.18
CDY03862	Canola	mitochondrion	42.11	44.09
CDY64692	Canola	mitochondrion	41.85	44.06
PGSC0003DMT400075705	Potato	mitochondrion	43.11	43.88
Solyc04g008350.1.1	Tomato	mitochondrion	43.11	43.77
AT1G68110.1	Thale cress	mitochondrion	39.85	41.95
CDY12691	Canola	mitochondrion	38.1	41.76
Bra033960.1-P	Field mustard	mitochondrion	38.1	41.76
CDX81471	Canola	mitochondrion	38.1	41.3
CDY01884	Canola	mitochondrion	36.84	41.18
Bra004282.1-P	Field mustard	mitochondrion	36.34	40.17
CDX96047	Canola	mitochondrion	36.09	39.89
CDY45281	Canola	cytosol	32.08	37.32
CDY41097	Canola	cytosol	31.83	36.92
Bra026195.1-P	Field mustard	cytosol	32.08	35.96
AT1G14686.1	Thale cress	cytosol	30.33	35.69
EES13983	Sorghum	mitochondrion	34.84	34.58
Os08t0467300-01	Rice	mitochondrion	34.09	34.34
Zm00001d049990_P001	Maize	mitochondrion	33.33	34.28
GSMUA_Achr7P18620_001	Banana	mitochondrion	33.08	34.02
AT2G01920.1	Thale cress	mitochondrion	26.07	33.33
Zm00001d005869_P001	Maize	mitochondrion	32.08	32.16
GSMUA_Achr8P22890_001	Banana	mitochondrion	31.83	31.99
GSMUA_Achr3P20230_001	Banana	mitochondrion	25.81	31.12
EER96828	Sorghum	mitochondrion	31.33	31.09
TraesCS5A01G297400.1	Wheat	mitochondrion	29.32	31.03
GSMUA_Achr7P02390_001	Banana	cytosol	32.33	31.01
TraesCS5B01G296700.1	Wheat	mitochondrion	29.32	30.63
Zm00001d031760_P001	Maize	mitochondrion	34.09	27.64
HORVU7Hr1G089710.1	Barley	mitochondrion	12.03	27.12
HORVU5Hr1G078270.1	Barley	cytosol	29.82	26.98
KRH05593	Soybean	cytosol	5.76	26.74
TraesCS5D01G304500.1	Wheat	mitochondrion	28.82	26.02
KRH38757	Soybean	cytosol, nucleus, peroxisome	21.3	19.59
KRH41749	Soybean	cytosol	13.78	19.43
KRH09259	Soybean	cytosol, nucleus, peroxisome	20.8	19.3
KRH60451	Soybean	mitochondrion	19.3	17.38
KRH20132	Soybean	cytosol	25.81	16.83
KRH42533	Soybean	cytosol	23.81	16.73
KRH58627	Soybean	nucleus	23.81	16.7
KRH38239	Soybean	cytosol	22.31	16.07
KRH02791	Soybean	cytosol	23.06	16.03
KRH43936	Soybean	cytosol, mitochondrion	23.81	16.02
KRH10492	Soybean	cytosol, mitochondrion	23.81	15.94
KRH19094	Soybean	cytosol	22.81	15.85
KRH61760	Soybean	mitochondrion	25.81	15.8
KRH58332	Soybean	mitochondrion	22.81	15.56
KRH52429	Soybean	endoplasmic reticulum	24.81	15.44
KRH20163	Soybean	cytosol	20.8	15.2
KRH03643	Soybean	mitochondrion	20.8	15.15
KRH37330	Soybean	cytosol	22.31	14.93
KRH54979	Soybean	cytosol	18.8	14.82
KRH12315	Soybean	cytosol	21.8	14.6
KRH17907	Soybean	cytosol	22.56	12.33

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	EntrezGene:100814886	MapMan:35.1	EMBL:ACUP02003271	InterPro:ANTH_dom
InterPro:Clathrin_AP_dom2	ncoils:Coil	InterPro:ENTH	InterPro:ENTH_VHS	EnsemblPlantsGene:GLYMA_05G137200	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	UniProt:I1K3B5
InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	EnsemblPlants:KRH58584	ProteinID:KRH58584	ProteinID:KRH58584.1
PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF19	SUPFAM:SSF48464	SUPFAM:SSF89009
TMHMM:TMhelix	UniParc:UPI00023393DA	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:32988925..32990952

Molecular Weight (calculated)

44914.5 Da

IEP (calculated)

8.268

GRAVY (calculated)

-0.147

Length

399 amino acids

Sequence
(BLAST)

001: MRVFKRASGA IKDRNSIWVA KFSPKGPFHN PDLETVIIKA TSHDDKHIDS KNVQRVFQWL RTSPLYLKPL VWILSMRMQK TRSWVVALKG LMLIHGVFCI
101: DIPVVQRMGR LPFDLSNFSD GHLSPAKAWS FNAFVRAYFA YLDKRSAFAS SETKQKNVSN KMKEVDETLM EELEKLQKLQ GMIDMLLQIR PKNENLNVGL
201: ILEAMDCVIV EVFGVYSKFC NKIAKVLLRI YEVGGKMEAS IGLKVLQKAS IQVEEMSLFF DFCKDIGVLN ASQCPKIDRI SREDIQDLER IISGASSKKG
301: CGVVGNDEDN NKAIVVRDCS STASVSQQKG SENGLMTVIT QQWEVFDDDH IMVGAKGMDN VSNGDKVIIG TTTNPFEESY GIVPYVPAHY QSLPDLISW

Best Arabidopsis Sequence Match ( AT1G25240.1 )
(BLAST)

001: MKLWKRASGA LKDRKTLFTI GFSRKTSFRN PDLDSAIIHA TSHDDSSVDY HNAHRVYKWI RSSPANLKPL VHALSSRVNR TRSWIVALKA LMLVHGVLCC
101: KVTSLQEIRR LPFDLSDFSD GHSRPSKTWG FNAFIRAYFS FLDQYSFFLS DQIRRRHKKP QLDSVNQELE RIEKLQSLLH MLLQIRPMAD NMKKTLILEA
201: MDCVVIEIFD IYGRICSAIA KLLIKIHPAA GKAEAVIALK IVKKATSQGE DLALYFEFCK EFGVSNAHDI PKFVTIPEED IKAIEKVING VEEEEVKKKE
301: DEVEEEKSII LVERPELQTI ITDKWEIFED DFCFTCKDIK ETDQHRKFNM DPSPLPLIVI DEPVYFTHTL PDLITF

Arabidopsis Description

ENTH/VHS/GAT family protein [Source:TAIR;Acc:AT1G25240]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.