CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
golgi 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033960.1-P	Field mustard	mitochondrion	100.0	100.0
CDX81471	Canola	mitochondrion	98.08	97.01
CDY01884	Canola	mitochondrion	76.92	78.43
CDX96047	Canola	mitochondrion	76.92	77.56
AT1G68110.1	Thale cress	mitochondrion	76.65	73.61
CDY64692	Canola	mitochondrion	67.58	64.91
CDY03862	Canola	mitochondrion	66.21	63.25
CDY60368	Canola	mitochondrion	64.84	62.43
CDY57160	Canola	mitochondrion	64.56	62.17
VIT_01s0011g06370.t01	Wine grape	mitochondrion	45.6	43.12
CDY45281	Canola	cytosol	37.64	39.94
Solyc01g005070.2.1	Tomato	mitochondrion	43.41	39.7
CDY41097	Canola	cytosol	37.36	39.53
PGSC0003DMT400058608	Potato	mitochondrion	43.41	39.5
PGSC0003DMT400075705	Potato	mitochondrion	41.21	38.27
KRH58584	Soybean	mitochondrion	41.76	38.1
KRH42490	Soybean	cytosol	42.03	37.87
Solyc04g008350.1.1	Tomato	mitochondrion	40.66	37.66
KRG89239	Soybean	cytosol, mitochondrion	38.74	36.72
EES13983	Sorghum	mitochondrion	39.01	35.32
KRH49763	Soybean	mitochondrion	37.36	34.96
Os08t0467300-01	Rice	mitochondrion	37.91	34.85
Zm00001d049990_P001	Maize	mitochondrion	35.99	33.76
GSMUA_Achr7P18620_001	Banana	mitochondrion	35.71	33.51
EER96828	Sorghum	mitochondrion	36.54	33.08
Zm00001d005869_P001	Maize	mitochondrion	35.71	32.66
TraesCS5A01G297400.1	Wheat	mitochondrion	32.42	31.3
TraesCS5B01G296700.1	Wheat	mitochondrion	32.69	31.15
GSMUA_Achr8P22890_001	Banana	mitochondrion	33.52	30.73
GSMUA_Achr7P02390_001	Banana	cytosol	34.89	30.53
GSMUA_Achr3P20230_001	Banana	mitochondrion	25.55	28.1
HORVU5Hr1G078270.1	Barley	cytosol	32.42	26.76
Zm00001d031760_P001	Maize	mitochondrion	35.99	26.63
TraesCS5D01G304500.1	Wheat	mitochondrion	32.14	26.47
HORVU7Hr1G089710.1	Barley	mitochondrion	12.64	25.99
CDY42239	Canola	cytosol	20.88	22.55
CDY41768	Canola	cytosol, mitochondrion	20.33	18.59
CDY50184	Canola	mitochondrion	18.41	18.21
CDX93766	Canola	mitochondrion	18.41	18.06
CDY71126	Canola	cytosol, mitochondrion	20.88	17.84
CDY47927	Canola	cytosol	23.9	17.23
CDY48813	Canola	cytosol	25.27	15.78
CDY04095	Canola	cytosol	24.73	15.76
CDY17660	Canola	cytosol	24.73	15.76
CDY36239	Canola	cytosol	24.73	15.76
CDX68831	Canola	cytosol	25.27	15.57
CDY32494	Canola	mitochondrion	24.45	15.56
CDY52732	Canola	cytosol	25.0	15.56
CDX75232	Canola	cytosol	25.27	15.51
CDY17459	Canola	cytosol	24.18	15.44
CDY09433	Canola	cytosol, mitochondrion	24.45	15.42
CDY18283	Canola	cytosol, nucleus, peroxisome	20.33	15.42
CDY35361	Canola	cytosol	25.0	15.4
CDY15448	Canola	mitochondrion	24.18	15.38
CDY38276	Canola	cytosol	25.0	15.37
CDY12401	Canola	cytosol, mitochondrion	22.8	15.37
CDX76976	Canola	cytosol	25.0	15.35
CDY11530	Canola	cytosol	24.45	15.34
CDY15531	Canola	cytosol, golgi, nucleus	25.0	14.92
CDY21904	Canola	mitochondrion	24.18	14.69
CDY22070	Canola	mitochondrion	24.18	14.62
CDX89382	Canola	cytosol	23.35	14.14
CDX94400	Canola	cytosol	23.08	14.09
CDY45299	Canola	mitochondrion	26.37	13.95
CDX86594	Canola	cytosol, golgi, nucleus	24.45	13.69
CDY53525	Canola	cytosol, mitochondrion	26.1	13.63
CDY53396	Canola	cytosol	20.88	12.77
CDX89917	Canola	cytosol	15.93	12.37
CDY18145	Canola	cytosol	15.38	12.02
CDX76977	Canola	cytosol	14.29	9.96
CDX76760	Canola	cytosol	12.64	9.85
CDX86691	Canola	cytosol, mitochondrion	25.27	9.1
CDY37444	Canola	nucleus	3.57	4.63

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	GO:A0A078FHL2	UniProt:A0A078FHL2	InterPro:ANTH_dom
EnsemblPlants:CDY12691	ProteinID:CDY12691	ProteinID:CDY12691.1	InterPro:Clathrin_AP_dom2	ncoils:Coil	InterPro:ENTH
InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289
GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	EnsemblPlantsGene:GSBRNA2T00070219001
InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951
PANTHER:PTHR22951:SF19	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI00025460EF	SEG:seg

Description

BnaA02g13590DBnaA02g13590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHL2]

Coordinates

chrLK032025:+:745320..746414

Molecular Weight (calculated)

41283.8 Da

IEP (calculated)

7.827

GRAVY (calculated)

-0.159

Length

364 amino acids

Sequence
(BLAST)

001: MKLWKRAAAA IKDQKSLIAV GFSRRASYRN TDLEAAIIKA TSHDDSSVDY SNAQRVYKWI KASPLNLKTL NHALSSRVNH TRSWIVALKS LMLLHGVVSC
101: KVPSVVGEIR RLPFDLSDFS DGHSSLSRTW GFNIFVRAYF AFLNSYSSFT SDQIIRARAN LRSDKVDSVK QQLDRIQKLQ SLLDLILQIR PIADNMKRAL
201: ILEAMDCIVL ESINIYGRIC SGIIKILPAA GKTDAARSLK IVNKATSQGE DLAMYFEFCK GFGVSNARDT PQFVTIPMAE VEAMEKMVKR VEKDEEEVVE
301: EEEKAIVLLE KPRLQTIITD KWETFEDDEY CFSEKAIQEY HQDPLPLVVS NQPVCYTMPD LITF

Best Arabidopsis Sequence Match ( AT1G68110.1 )
(BLAST)

001: MKLWKRAAAA IKDRKSLLAV GFSRRNSSYR NADLEAAIIK ATSHDDSSVD YSNAHRVYKW IRSSPLNLKT LVYAISSRVN HTRSWIVALK SLMLLHGVLC
101: CKVPSVVGEF RRLPFDLSDF SDGHSCLSKT WGFNVFVRTY FAFLHHYSSF LSDQIHRLRG NNRRSLEKTS DSVIQELERI QKLQSLLDMI LQIRPVADNM
201: KKTLILEAMD CLVIESINIY GRICGAVMKV LPLAGKSEAA TVLKIVNKTT SQGEDLIVYF EFCKGFGVSN AREIPQFVRI PEEEVEAIEK MIDTVQEKPK
301: LEKDEEKEDE KAMVVLEQPK KLQTIITDKW EIFEDDYRCF DRKDKWEIFE DEYHQNHLPL ITMNQPVYIT YTMPDLITF

Arabidopsis Description

Putative clathrin assembly protein At1g68110 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9X5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.