Factsheet for GSMUA_Achr8P22890_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
endoplasmic reticulum 1
mitochondrion 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P02390_001	Banana	cytosol	64.99	62.02
GSMUA_Achr7P18620_001	Banana	mitochondrion	54.91	56.19
Os08t0467300-01	Rice	mitochondrion	52.39	52.53
EES13983	Sorghum	mitochondrion	52.14	51.49
GSMUA_Achr3P20230_001	Banana	mitochondrion	42.82	51.36
Zm00001d049990_P001	Maize	mitochondrion	48.36	49.48
TraesCS5B01G296700.1	Wheat	mitochondrion	45.34	47.12
TraesCS5A01G297400.1	Wheat	mitochondrion	44.33	46.68
EER96828	Sorghum	mitochondrion	43.58	43.03
Zm00001d005869_P001	Maize	mitochondrion	43.07	42.96
HORVU7Hr1G089710.1	Barley	mitochondrion	18.89	42.37
HORVU5Hr1G078270.1	Barley	cytosol	45.34	40.82
Zm00001d031760_P001	Maize	mitochondrion	50.13	40.45
TraesCS5D01G304500.1	Wheat	mitochondrion	44.08	39.59
VIT_01s0011g06370.t01	Wine grape	mitochondrion	34.76	35.84
CDY64692	Canola	mitochondrion	33.25	34.83
Bra012491.1-P	Field mustard	mitochondrion	33.0	34.66
CDY03862	Canola	mitochondrion	33.0	34.38
AT1G25240.2	Thale cress	mitochondrion	32.24	33.95
CDY01884	Canola	mitochondrion	30.23	33.61
CDY57160	Canola	mitochondrion	31.99	33.6
CDY12691	Canola	mitochondrion	30.73	33.52
Bra033960.1-P	Field mustard	mitochondrion	30.73	33.52
PGSC0003DMT400058608	Potato	mitochondrion	33.75	33.5
CDX81471	Canola	mitochondrion	30.98	33.42
Bra024772.1-P	Field mustard	mitochondrion	31.74	33.42
CDY60368	Canola	mitochondrion	31.74	33.33
Solyc01g005070.2.1	Tomato	mitochondrion	33.0	32.91
KRG89239	Soybean	cytosol, mitochondrion	31.49	32.55
AT1G68110.1	Thale cress	mitochondrion	30.73	32.19
KRH42490	Soybean	cytosol	32.75	32.18
Bra004282.1-P	Field mustard	mitochondrion	29.22	32.13
CDX96047	Canola	mitochondrion	29.22	32.13
PGSC0003DMT400075705	Potato	mitochondrion	31.49	31.89
KRH58584	Soybean	mitochondrion	31.99	31.83
Solyc04g008350.1.1	Tomato	mitochondrion	31.49	31.81
AT2G01920.1	Thale cress	mitochondrion	24.18	30.77
CDY45281	Canola	cytosol	25.94	30.03
KRH49763	Soybean	mitochondrion	29.22	29.82
AT1G14686.1	Thale cress	cytosol	25.19	29.5
Bra026195.1-P	Field mustard	cytosol	25.94	28.93
CDY41097	Canola	cytosol	24.94	28.78
GSMUA_Achr7P02300_001	Banana	plastid	20.65	16.24
GSMUA_Achr4P05920_001	Banana	cytosol	21.66	15.69
GSMUA_Achr2P18700_001	Banana	cytosol	19.65	15.57
GSMUA_Achr9P03950_001	Banana	cytosol, mitochondrion, plastid	19.9	14.99
GSMUA_Achr4P13420_001	Banana	cytosol	20.15	14.98
GSMUA_Achr11P...	Banana	cytosol	17.13	14.91
GSMUA_Achr5P23570_001	Banana	cytosol	20.4	14.86
GSMUA_Achr11P...	Banana	cytosol	19.4	14.81
GSMUA_Achr6P18600_001	Banana	cytosol, mitochondrion	19.65	14.69
GSMUA_Achr9P21890_001	Banana	cytosol	20.4	14.46
GSMUA_Achr7P04960_001	Banana	cytosol	19.9	14.36
GSMUA_Achr1P15690_001	Banana	cytosol	19.9	14.13
GSMUA_Achr3P05590_001	Banana	cytosol	19.4	14.1
GSMUA_Achr10P...	Banana	mitochondrion	17.88	14.06
GSMUA_Achr6P03060_001	Banana	cytosol	19.14	13.89
GSMUA_Achr4P20660_001	Banana	cytosol	19.14	13.64
GSMUA_Achr6P33420_001	Banana	cytosol, mitochondrion, plastid	18.89	11.87

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2	InterPro:ENTH
InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289
GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	EnsemblPlantsGene:GSMUA_Achr8G22890_001
EnsemblPlants:GSMUA_Achr8P22890_001	EnsemblPlants:GSMUA_Achr8T22890_001	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	UniProt:M0TSU2
PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF19	SMART:SM00273	SUPFAM:SSF48464
SUPFAM:SSF89009	UniParc:UPI000296559A	SEG:seg	:	:	:

Description

Putative clathrin assembly protein At1g25240 [Source:GMGC_GENE;Acc:GSMUA_Achr8G22890_001]

Coordinates

chr8:+:27409058..27410251

Molecular Weight (calculated)

44200.3 Da

IEP (calculated)

6.577

GRAVY (calculated)

-0.352

Length

397 amino acids

Sequence
(BLAST)

001: MTSPREWWRR AAAAAKDKGS LCMTRMASVR HHHYCPRRGG REVDATVIRA TSHDERSVDY KSAGRVYAWA RAAPTSFLDP LMWSLAHRAA RTHSWAVALK
101: SLLLAHGLLL CSEDAPPSAR LGRLPFDLSD FRDRSSSSGF SAFIRAYFRF LDHRSLFSAH NKPVKDATLT TSPAAKPGDE EDTESDADLA ELERLQTLLD
201: LLLQVRPYAD GMGVGLVLEA MDCVMIEILE VYSSICNGVA HFLVDILGHD SSKPVHNRQS EARRRRGEIG MRVLRRASAQ SSQLSAYLDL CRTLGVISPA
301: EIAAVQSIPD EDIADLEKLL LGGVPKEEQE EKDLGRAESR YGTVITERWV VFDEEEEGHS GNPILSQRPE RSRPSSSWVP TEDNGRAVVL LWNTNLI

Best Arabidopsis Sequence Match ( AT1G25240.1 )
(BLAST)

001: MKLWKRASGA LKDRKTLFTI GFSRKTSFRN PDLDSAIIHA TSHDDSSVDY HNAHRVYKWI RSSPANLKPL VHALSSRVNR TRSWIVALKA LMLVHGVLCC
101: KVTSLQEIRR LPFDLSDFSD GHSRPSKTWG FNAFIRAYFS FLDQYSFFLS DQIRRRHKKP QLDSVNQELE RIEKLQSLLH MLLQIRPMAD NMKKTLILEA
201: MDCVVIEIFD IYGRICSAIA KLLIKIHPAA GKAEAVIALK IVKKATSQGE DLALYFEFCK EFGVSNAHDI PKFVTIPEED IKAIEKVING VEEEEVKKKE
301: DEVEEEKSII LVERPELQTI ITDKWEIFED DFCFTCKDIK ETDQHRKFNM DPSPLPLIVI DEPVYFTHTL PDLITF

Arabidopsis Description

ENTH/VHS/GAT family protein [Source:TAIR;Acc:AT1G25240]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.