Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G14686.1 | Thale cress | cytosol | 51.92 | 47.79 |
| AT1G25240.2 | Thale cress | mitochondrion | 38.46 | 31.83 |
| AT1G68110.1 | Thale cress | mitochondrion | 37.82 | 31.13 |
| PGSC0003DMT400058608 | Potato | mitochondrion | 36.22 | 28.25 |
| Solyc01g005070.2.1 | Tomato | mitochondrion | 35.9 | 28.14 |
| PGSC0003DMT400075705 | Potato | mitochondrion | 34.94 | 27.81 |
| Solyc04g008350.1.1 | Tomato | mitochondrion | 34.62 | 27.48 |
| VIT_01s0011g06370.t01 | Wine grape | mitochondrion | 33.65 | 27.27 |
| KRG89239 | Soybean | cytosol, mitochondrion | 33.33 | 27.08 |
| GSMUA_Achr7P18620_001 | Banana | mitochondrion | 32.69 | 26.29 |
| KRH58584 | Soybean | mitochondrion | 33.33 | 26.07 |
| KRH42490 | Soybean | cytosol | 33.65 | 25.99 |
| KRH49763 | Soybean | mitochondrion | 32.37 | 25.96 |
| Zm00001d049990_P001 | Maize | mitochondrion | 31.73 | 25.52 |
| Os08t0467300-01 | Rice | mitochondrion | 32.37 | 25.51 |
| EES13983 | Sorghum | mitochondrion | 32.69 | 25.37 |
| TraesCS5B01G296700.1 | Wheat | mitochondrion | 30.45 | 24.87 |
| TraesCS5A01G297400.1 | Wheat | mitochondrion | 29.49 | 24.4 |
| GSMUA_Achr8P22890_001 | Banana | mitochondrion | 30.77 | 24.18 |
| EER96828 | Sorghum | mitochondrion | 31.09 | 24.13 |
| Zm00001d005869_P001 | Maize | mitochondrion | 29.81 | 23.37 |
| GSMUA_Achr7P02390_001 | Banana | cytosol | 31.09 | 23.32 |
| GSMUA_Achr3P20230_001 | Banana | mitochondrion | 24.04 | 22.66 |
| HORVU7Hr1G089710.1 | Barley | mitochondrion | 12.18 | 21.47 |
| HORVU5Hr1G078270.1 | Barley | cytosol | 30.13 | 21.32 |
| TraesCS5D01G304500.1 | Wheat | mitochondrion | 29.49 | 20.81 |
| Zm00001d031760_P001 | Maize | mitochondrion | 32.69 | 20.73 |
| AT1G33340.1 | Thale cress | cytosol, mitochondrion, nucleus | 18.27 | 15.24 |
| AT5G35200.2 | Thale cress | cytosol | 20.83 | 11.95 |
| AT2G01600.1 | Thale cress | cytosol, mitochondrion | 21.15 | 11.56 |
| AT4G32285.2 | Thale cress | cytosol | 23.4 | 11.5 |
| AT2G25430.1 | Thale cress | cytosol | 23.4 | 11.18 |
| AT5G57200.1 | Thale cress | cytosol | 20.83 | 11.0 |
| AT1G03050.1 | Thale cress | cytosol, mitochondrion | 20.83 | 10.85 |
| AT4G25940.1 | Thale cress | cytosol | 20.83 | 10.82 |
| AT4G02650.1 | Thale cress | mitochondrion | 21.15 | 10.8 |
| AT1G05020.1 | Thale cress | cytosol | 22.44 | 10.72 |
| AT1G14910.1 | Thale cress | mitochondrion | 21.79 | 9.83 |
Protein Annotations
| Gene3D:1.20.58.150 | Gene3D:1.25.40.90 | MapMan:35.1 | EntrezGene:814723 | ProteinID:AAD26976.1 | ProteinID:AEC05520.1 |
| InterPro:ANTH_dom | ArrayExpress:AT2G01920 | EnsemblPlantsGene:AT2G01920 | RefSeq:AT2G01920 | TAIR:AT2G01920 | RefSeq:AT2G01920-TAIR-G |
| EnsemblPlants:AT2G01920.1 | TAIR:AT2G01920.1 | Unigene:At.52593 | InterPro:Clathrin_AP_dom2 | EMBL:DQ056522 | InterPro:ENTH |
| InterPro:ENTH_VHS | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005543 | GO:GO:0005545 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005905 |
| GO:GO:0006810 | GO:GO:0006897 | GO:GO:0008150 | GO:GO:0008289 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0030136 | GO:GO:0030276 | GO:GO:0031410 | GO:GO:0048268 | InterPro:IPR008942 |
| InterPro:IPR013809 | InterPro:IPR014712 | RefSeq:NP_178301.1 | PFAM:PF07651 | PO:PO:0000084 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50942 | PANTHER:PTHR22951 | PANTHER:PTHR22951:SF19 |
| UniProt:Q9SHV5 | SUPFAM:SSF48464 | SUPFAM:SSF89009 | TMHMM:TMhelix | UniParc:UPI00000A3C01 | SEG:seg |
Description
Putative clathrin assembly protein At2g01920 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHV5]
Coordinates
chr2:+:426052..427091
Molecular Weight (calculated)
35722.9 Da
IEP (calculated)
9.944
GRAVY (calculated)
0.051
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRKMKLWRR VSGAIKDKLS LITATDEKFT AAVIKATSHN DVSMDIENVQ FIYRYIQSNP SSFKPIIRAV SLRVEHTRNW TVALKCLMLL HGLFFSGIMT
101: VDSIGRLPFD LSGFGRRKSR FSRTGRFNIF VRAYFMFLDE RSILYYNKNM IRLEIIVKMQ RIVDSLMRIK PIGETPLVIE AMEYVISEVV LINGHICRGF
201: AGFLSDVQSN MLEISSAEAD LAMNIVAKSL SQREKLFKYF EFCRGFGVTN AQETSNILRI TESQMIVLDK LLHIAPELDW KAAKVTPVTA ADMVDLVTSE
301: ERSNTPSDFL TF
101: VDSIGRLPFD LSGFGRRKSR FSRTGRFNIF VRAYFMFLDE RSILYYNKNM IRLEIIVKMQ RIVDSLMRIK PIGETPLVIE AMEYVISEVV LINGHICRGF
201: AGFLSDVQSN MLEISSAEAD LAMNIVAKSL SQREKLFKYF EFCRGFGVTN AQETSNILRI TESQMIVLDK LLHIAPELDW KAAKVTPVTA ADMVDLVTSE
301: ERSNTPSDFL TF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.